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Volumn 58, Issue 9, 2008, Pages 2075-2080

Haloactinospora alba gen. nov., sp. nov., a halophilic filamentous actinomycete of the family Nocardiopsaceae

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; CARDIOLIPIN; DIAMINO ACID; DIAMINOPIMELIC ACID; FATTY ACID; GALACTOSE; PHOPHATIDYLINOSITOL MANNOSIDE; PHOSPHATIDYLCHOLINE; PHOSPHOLIPID; RIBOSE; RNA 16S; SODIUM CHLORIDE; UNCLASSIFIED DRUG; FARNOQUINONE; RIBOSOME DNA;

EID: 53749101004     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65531-0     Document Type: Article
Times cited : (62)

References (35)
  • 1
    • 0028286543 scopus 로고
    • Nocardiopsis halophila sp. nov., a new halophilic actinomycete isolated from soil
    • Al-Tai, A. M. & Ruan, J. S. (1994). Nocardiopsis halophila sp. nov., a new halophilic actinomycete isolated from soil. Int J Syst Bacteriol 44, 474-478.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 474-478
    • Al-Tai, A.M.1    Ruan, J.S.2
  • 3
    • 52449107753 scopus 로고    scopus 로고
    • Streptomonospora halophila sp. nov., a halophilic actinomycete isolated from a hypersaline soil
    • Cai, M., Zhi, X.-Y., Tang, S.-K., Zhang, Y.-Q., Xu, L.-H. & Li, W.-J. (2008). Streptomonospora halophila sp. nov., a halophilic actinomycete isolated from a hypersaline soil. Int J Syst Evol Microbiol 58, 1556-1560.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1556-1560
    • Cai, M.1    Zhi, X.-Y.2    Tang, S.-K.3    Zhang, Y.-Q.4    Xu, L.-H.5    Li, W.-J.6
  • 4
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.-H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 6
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa, T., Takizawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319-322.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 11
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 12
    • 0001579749 scopus 로고
    • Fatty acid and menaquinone analysis of actinomycetes and related organisms
    • Chemical Methods in Bacterial Systematics, Edited by M. Goodfellow & D. E. Minnikin. New York: Academic Press
    • Kroppenstedt, R. M. (1985). Fatty acid and menaquinone analysis of actinomycetes and related organisms. In Chemical Methods in Bacterial Systematics (Society for Applied Bacteriology Technical Series vol. 20), pp. 173-199. Edited by M. Goodfellow & D. E. Minnikin. New York: Academic Press.
    • (1985) Society for Applied Bacteriology Technical Series , vol.20 , pp. 173-199
    • Kroppenstedt, R.M.1
  • 13
    • 55849099328 scopus 로고    scopus 로고
    • The family Nocardiopsaceae
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Kroppenstedt, R. M. & Evtushenko, L. I. (2006). The family Nocardiopsaceae. In The Prokaryotes. A Handbook on the Biology of Bacteria, 3rd edn, vol. 3, pp. 754-795. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes. A Handbook on the Biology of Bacteria , vol.3 , pp. 754-795
    • Kroppenstedt, R.M.1    Evtushenko, L.I.2
  • 14
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar, S., Tamura, K., Jakobsen, I.-B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.-B.3    Nei, M.4
  • 15
    • 0037214932 scopus 로고    scopus 로고
    • Nocardiopsis xinjiangensis sp. nov., a halophilic actinomycete isolated from a saline soil sample in China
    • Li, M.-G., Li, W.-J., Xu, P., Cui, X.-L., Xu, L.-H. & Jiang, C.-L. (2003a). Nocardiopsis xinjiangensis sp. nov., a halophilic actinomycete isolated from a saline soil sample in China. Int J Syst Evol Microbiol 53, 317-321.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 317-321
    • Li, M.-G.1    Li, W.-J.2    Xu, P.3    Cui, X.-L.4    Xu, L.-H.5    Jiang, C.-L.6
  • 16
    • 0141614083 scopus 로고    scopus 로고
    • Li, W.-J., Xu, P., Zhang, L.-P., Tang, S.-K., Cui, X.-L, Mao, P.-H., Xu, L.-H., Schumann, P., Stackebrandt, E. & Jiang, C.-L. (2003b). Streptomonospora alba sp. nov., a novel halophilic actinomycete, and emended description of the genus Streptomonospora Cui et al. 2001. Int J Syst Evol Microbiol 53, 1421-1425.
    • Li, W.-J., Xu, P., Zhang, L.-P., Tang, S.-K., Cui, X.-L, Mao, P.-H., Xu, L.-H., Schumann, P., Stackebrandt, E. & Jiang, C.-L. (2003b). Streptomonospora alba sp. nov., a novel halophilic actinomycete, and emended description of the genus Streptomonospora Cui et al. 2001. Int J Syst Evol Microbiol 53, 1421-1425.
  • 18
    • 33744739800 scopus 로고    scopus 로고
    • Li, W.-J., Kroppenstedt, R. M., Wang, D., Tang, S.-K., Lee, J.-C., Park, D.-J., Kim, C.-J., Xu, L.-H. & Jiang, C.-L. (2006). Five novel species of the genus Nocardiopsis isolated from hypersaline soils and emended description of Nocardiopsis salina Li et al. 2004. Int J Syst Evol Microbiol 56, 1089-1096.
    • Li, W.-J., Kroppenstedt, R. M., Wang, D., Tang, S.-K., Lee, J.-C., Park, D.-J., Kim, C.-J., Xu, L.-H. & Jiang, C.-L. (2006). Five novel species of the genus Nocardiopsis isolated from hypersaline soils and emended description of Nocardiopsis salina Li et al. 2004. Int J Syst Evol Microbiol 56, 1089-1096.
  • 19
    • 34547447107 scopus 로고    scopus 로고
    • Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia
    • Li, W.-J., Xu, P., Schumann, P., Zhang, Y.-Q., Pukall, R., Xu, L.-H., Stackebrandt, E. & Jiang, C.-L. (2007). Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia. Int J Syst Evol Microbiol 57, 1424-1428.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1424-1428
    • Li, W.-J.1    Xu, P.2    Schumann, P.3    Zhang, Y.-Q.4    Pukall, R.5    Xu, L.-H.6    Stackebrandt, E.7    Jiang, C.-L.8
  • 20
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from microorganisms
    • Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
    • (1961) J Mol Biol , vol.3 , pp. 208-218
    • Marmur, J.1
  • 21
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 22
    • 0017192026 scopus 로고
    • Nocardiopsis, a new genus of the order Actinomycetales
    • Meyer, J. (1976). Nocardiopsis, a new genus of the order Actinomycetales. Int J Syst Bacteriol 26, 487-493.
    • (1976) Int J Syst Bacteriol , vol.26 , pp. 487-493
    • Meyer, J.1
  • 24
    • 0029799968 scopus 로고    scopus 로고
    • The genus Norcardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov
    • Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. (1996). The genus Norcardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088-1092.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic tree
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic tree. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0036022495 scopus 로고    scopus 로고
    • New genus-specific primers for the PCR identification of novel isolates of the genera Nocardiopsis and Saccharothrix
    • Salazar, O., González, I. & Genilloud, O. (2002). New genus-specific primers for the PCR identification of novel isolates of the genera Nocardiopsis and Saccharothrix. Int J Syst Evol Microbiol 52, 1411-1421.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1411-1421
    • Salazar, O.1    González, I.2    Genilloud, O.3
  • 27
    • 0141810217 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
    • (1990) USFCC Newsl , vol.20 , pp. 16
    • Sasser, M.1
  • 28
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 29
    • 0000221252 scopus 로고
    • General characterization
    • Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1981). General characterization. In Manual of Methods for General Microbiology, pp. 409-443. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology.
    • (1981) Manual of Methods for General Microbiology , pp. 409-443
    • Smibert, R.M.1    Krieg, N.R.2
  • 30
    • 0030893495 scopus 로고    scopus 로고
    • Proposal for a new hierarchic classification system, Actinobacteria classis nov
    • Stackebrandt, E., Rainey, F. A. & Ward-Rainey, N. L. (1997). Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47, 479-491.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 479-491
    • Stackebrandt, E.1    Rainey, F.A.2    Ward-Rainey, N.L.3
  • 31
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 33
    • 19544387020 scopus 로고    scopus 로고
    • Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family' Oxalobacteraceae' isolated from China
    • Xu, P., Li, W.-J., Tang, S.-K., Zhang, Y.-Q., Chen, G.-Z., Chen, H.-H., Xu, L.-H. & Jiang, C.-L. (2005). Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family' Oxalobacteraceae' isolated from China. Int J Syst Evol Microbiol 55, 1149-1153.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1149-1153
    • Xu, P.1    Li, W.-J.2    Tang, S.-K.3    Zhang, Y.-Q.4    Chen, G.-Z.5    Chen, H.-H.6    Xu, L.-H.7    Jiang, C.-L.8
  • 34
    • 54749094416 scopus 로고    scopus 로고
    • Thermobifida halotolerans sp. nov., isolated from a salt mine sample, and emended description of the genus Thermobifida
    • Yang, L.-L., Tang, S.-K., Zhang, Y.-Q., Zhi, X.-Y., Wang, D., Xu, L.-H. & Li, W.-J. (2005). Thermobifida halotolerans sp. nov., isolated from a salt mine sample, and emended description of the genus Thermobifida. Int J Syst Evol Microbiol 58, 1821-1825.
    • (2005) Int J Syst Evol Microbiol , vol.58 , pp. 1821-1825
    • Yang, L.-L.1    Tang, S.-K.2    Zhang, Y.-Q.3    Zhi, X.-Y.4    Wang, D.5    Xu, L.-H.6    Li, W.-J.7
  • 35
    • 0031799382 scopus 로고    scopus 로고
    • Reclassification of Thermomonospora and Microtetraspora
    • Zhang, Z., Wang, Y. & Ruan, J. (1998). Reclassification of Thermomonospora and Microtetraspora. Int J Syst Bacteriol 48, 411-422.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 411-422
    • Zhang, Z.1    Wang, Y.2    Ruan, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.