Lactobacillus hordei sp. nov., a bacteriocinogenic Strain isoloated from malted barley

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 9, 2008, Pages 2013-2017

  Rouse, Susan ^a   Canchaya, Carlos ^b   van Sinderen, Douwen ^a,b  

^a UNIVERSITY COLLEGE CORK   (Ireland)

^b UNIVERSITY COLLEGE CORK   (Ireland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; BACTERIOCIN; CATALASE; RNA 16S; BACTERIAL DNA; RIBOSOME DNA;

ARTICLE; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIUM ISOLATE; DNA DNA HYBRIDIZATION; ENZYME ACTIVITY; GENE IDENTIFICATION; GRAM POSITIVE BACTERIUM; LACTIC ACID BACTERIUM; LACTOBACILLUS; LACTOBACILLUS HORDEI; LACTOBACILLUS MALI; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; RNA SEQUENCE; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; BACTERIUM IDENTIFICATION; BARLEY; BIOSYNTHESIS; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; LOCOMOTION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; PHYSIOLOGY; RNA GENE;

HORDEUM; LACTOBACILLUS; LACTOBACILLUS MALI;

BACTERIAL TYPING TECHNIQUES; BACTERIOCINS; CATALASE; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; HORDEUM; LACTOBACILLUS; LOCOMOTION; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 53749096241     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65584-0     Document Type: Article

References (28)

1. Carr, J. G. & Davies, P. A. (1970). Homofermentative lactobacilli of ciders including Lactobacillus mali sp. nov. J Appl Bacteriol 33, 768-774.
2. Cashion, P., Hodler-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
3. Corsetti, A., Settani, L., van Sinderen, D., Felis, G. E., Dellaglio, F. & Gobetti, M. (2005). Lactobacillus rossii sp. nov., isolated from wheat sourdough. Int J Syst Evol Microbiol 55, 35-40.
4. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
5. Edwards, C. G., Collins, M. D., Lawson, P. A. & Rodriguez, A. V. (2000). Lactobacillus nagelii sp. nov., an organism isolated from a partially fermented wine. Int J Syst Evol Microbiol 50, 699-702.
6. Endo, A. & Okada, S. (2005). Lactobacillus satsumensis sp. nov., isolated from mashes of shochu, a typical Japanese distilled spirit made from fermented rice and other starchy materials. Int J Syst Evol Microbiol 55, 83-85.
7. Guindon, S. & Gascuel, O. (2003). A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
8. Hartnett, D. J., Vaughan, A. & van Sinderen, D. (2002). Antimicrobial-producing lactic acid bacteria isolated from raw barley and sorghum. J Inst Brew 108, 169-177.
9. Hucker, G. J. (1921). A new modification and application of the Gram stain. J Bacteriol 6, 395-397.
10. Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
11. Kandler, O. & Weiss, N. (1986). Genus Lactobacillus Beijerinck 1901. In Bergey's Manual of Systematic Bacteriology, vol. 2, pp. 1209-1234. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams and Wilkins.
12. Kato, Y., Sakala, R. M., Hayashidani, H., Kiuchi, A., Kaneuchi, C. & Ogawa, M. (2000). Lactobacillus algidus sp. nov., a psychrophilic lactic acid bacterium isolated from vacuum-packaged refrigerated beef. Int J Syst Evol Microbiol 50, 1143-1149.
13. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
14. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
15. Morotomi, M., Yuki, N., Kado, Y., Kushiro, A., Shimazaki, T., Watanabe, K. & Yuyama, T. (2002). Lactobacillus equi sp. nov., a predominant intestinal Lactobacillus species of the horse isolated from faeces of healthy horses. Int J Syst Evol Microbiol 52, 211-214.
16. O'Mahony, A., O'Sullivan, T., Walsh, Y., Vaughan, A., Maher, M., Fitzgerald, G. F. & van Sinderen, D. (2000). Characterisation of antimicrobial producing lactic acid bacteria from malted barley. J Inst Brew 106, 403-410.
17. O'Sullivan, T. F., Walsh, Y., O'Mahony, A., Fitzgerald, G. F. & van Sinderen, D. (1999). A comparative study of malthouse and brewing microflora. J Inst Brew 105, 55-61.
18. Rhuland, L. E., Work, E., Denman, R. F. & Hoare, D. S. (1955). The behavior of the isomers of α,ε-diaminopimelic acid on paper chromatograms. J Am Chem Soc 77, 4844-4846.
19. Rodas, A. M., Ferrer, S. & Pardo, I. (2005). Polyphasic study of wine Lactobacillus strains: taxonomic implications. Int J Syst Evol Microbiol 55, 197-207.
20. Rodas, A. M., Chenoll, E., Macián, M. C., Ferrer, S., Pardo, I. & Aznar, R. (2006). Lactobacillus vini sp. nov., a wine lactic acid bacterium homofermentative for pentoses. Int J Syst Evol Microbiol 56, 513-517.
21. Rouse, S., Sun, F., Vaughan, A. & van Sinderen, D. (2007). High-throughput isolation of bacteriocin-producing lactic acid bacteria, with potential application in the brewing industry. J Inst Brew 113, 256-262.
22. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
23. Stackebrandt, E. & Ebers, J. (2006). Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 33, 152-155.
24. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
25. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
26. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetic analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
27. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
28. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.