메뉴 건너뛰기




Volumn 21, Issue 8, 2008, Pages 1056-1069

Cerebellar development transcriptome database (CDT-DB): Profiling of spatio-temporal gene expression during the postnatal development of mouse cerebellum

Author keywords

Cerebellum; Gene expression; in situ hybridization; Microarray; Postnatal development

Indexed keywords

CEREBELLUM; IN SITU HYBRIDIZATION; MICROARRAY; POSTNATAL DEVELOPMENT;

EID: 53249098510     PISSN: 08936080     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neunet.2008.05.004     Document Type: Article
Times cited : (57)

References (45)
  • 1
    • 0028048223 scopus 로고
    • Differential expression of five N-methl-D-aspartate receptor subunit mRNAs in the cerebellum of developing and adult rats
    • Akazawa C., Shigemoto R., Bessho Y., Nakanishi S., and Mizuno N. Differential expression of five N-methl-D-aspartate receptor subunit mRNAs in the cerebellum of developing and adult rats. Journal of Comparative Neurology 347 (1994) 150-160
    • (1994) Journal of Comparative Neurology , vol.347 , pp. 150-160
    • Akazawa, C.1    Shigemoto, R.2    Bessho, Y.3    Nakanishi, S.4    Mizuno, N.5
  • 2
    • 34547908495 scopus 로고    scopus 로고
    • An oligodendrocyte enhancer in a phylogenetically conserved intron region of the mammalian myelin gene Opalin
    • Aruga J., Yoshikawa F., Nozaki Y., Sakai Y., Toyoda A., and Furuichi T. An oligodendrocyte enhancer in a phylogenetically conserved intron region of the mammalian myelin gene Opalin. Journal of Neurochemistry 102 (2007) 1533-1547
    • (2007) Journal of Neurochemistry , vol.102 , pp. 1533-1547
    • Aruga, J.1    Yoshikawa, F.2    Nozaki, Y.3    Sakai, Y.4    Toyoda, A.5    Furuichi, T.6
  • 3
    • 0032572566 scopus 로고    scopus 로고
    • Tumor-suppressor p53 is expressed in proliferating and newly formed neurons of the embryonic and postnatal rat brain: comparison with expression of the cell cycle regulators p21Waf1/Cip1, p27Kip1, p57Kip2, p16Ink4a, Cyclin G1, and the proto-oncogene Bax
    • Campagne M.V.L., and Gill R. Tumor-suppressor p53 is expressed in proliferating and newly formed neurons of the embryonic and postnatal rat brain: comparison with expression of the cell cycle regulators p21Waf1/Cip1, p27Kip1, p57Kip2, p16Ink4a, Cyclin G1, and the proto-oncogene Bax. Journal of Comparative neurology 397 (1998) 181-198
    • (1998) Journal of Comparative neurology , vol.397 , pp. 181-198
    • Campagne, M.V.L.1    Gill, R.2
  • 5
    • 0034663159 scopus 로고    scopus 로고
    • Developmental profile of the changing properties of NMDA receptors at cerebellar mossy fiber-granule cell synapses
    • Cathala L., Misra C., and Cull-Candy S. Developmental profile of the changing properties of NMDA receptors at cerebellar mossy fiber-granule cell synapses. Journal of Neuroscience 20 (2000) 5899-5905
    • (2000) Journal of Neuroscience , vol.20 , pp. 5899-5905
    • Cathala, L.1    Misra, C.2    Cull-Candy, S.3
  • 6
    • 18644366354 scopus 로고    scopus 로고
    • Molecular analysis of gene expression in the developing pontocerebellar projection system
    • Diaz E., Ge Y., Yang Y.H., Loh K.C., Serafini T.A., Okazaki Y., et al. Molecular analysis of gene expression in the developing pontocerebellar projection system. Neuron 36 (2002) 417-434
    • (2002) Neuron , vol.36 , pp. 417-434
    • Diaz, E.1    Ge, Y.2    Yang, Y.H.3    Loh, K.C.4    Serafini, T.A.5    Okazaki, Y.6
  • 7
    • 0028295715 scopus 로고
    • NMDA-receptor channel diversity in the developing cerebellum
    • Farrant M., Feldmeyer D., Takahashi T., and Cull-Candy S.G. NMDA-receptor channel diversity in the developing cerebellum. Nature 368 (1994) 335-339
    • (1994) Nature , vol.368 , pp. 335-339
    • Farrant, M.1    Feldmeyer, D.2    Takahashi, T.3    Cull-Candy, S.G.4
  • 9
    • 35348908406 scopus 로고    scopus 로고
    • Systematic gene expression mapping clusters nuclear receptors according to their function in the brain
    • Gofflot F., Chartoire N., Vasseur L., Heikkinen S., Dembele D., Merrer J.L., et al. Systematic gene expression mapping clusters nuclear receptors according to their function in the brain. Cell 131 (2007) 405-418
    • (2007) Cell , vol.131 , pp. 405-418
    • Gofflot, F.1    Chartoire, N.2    Vasseur, L.3    Heikkinen, S.4    Dembele, D.5    Merrer, J.L.6
  • 10
    • 0031928291 scopus 로고    scopus 로고
    • The cells and molecules that makes a cerebellum
    • Goldowitz D., and Hamre K. The cells and molecules that makes a cerebellum. Trends in Neuroscience 21 (1998) 375-382
    • (1998) Trends in Neuroscience , vol.21 , pp. 375-382
    • Goldowitz, D.1    Hamre, K.2
  • 11
    • 19944401504 scopus 로고    scopus 로고
    • Mouse brain organization revealed through direct genome-scale TF expression analysis
    • Gray P.A., Fu H., Luo P., Zhao Q., Yu J., Ferrari A., et al. Mouse brain organization revealed through direct genome-scale TF expression analysis. Science 306 (2004) 2255-2257
    • (2004) Science , vol.306 , pp. 2255-2257
    • Gray, P.A.1    Fu, H.2    Luo, P.3    Zhao, Q.4    Yu, J.5    Ferrari, A.6
  • 12
    • 23244432392 scopus 로고    scopus 로고
    • Large-scale genomic approaches to brain development and circuitry
    • Hatten M.E., and Heintz N. Large-scale genomic approaches to brain development and circuitry. Annual Review of Neuroscience 28 (2005) 89-108
    • (2005) Annual Review of Neuroscience , vol.28 , pp. 89-108
    • Hatten, M.E.1    Heintz, N.2
  • 13
    • 35948999631 scopus 로고    scopus 로고
    • Very-KIND, a KIND domain-containing RasGEF, controls dendrite growth by linking Ras small GTPases and MAP2
    • Huang J., Furuya A., and Furuichi T. Very-KIND, a KIND domain-containing RasGEF, controls dendrite growth by linking Ras small GTPases and MAP2. Journal of Cell Biology 179 (2007) 539-552
    • (2007) Journal of Cell Biology , vol.179 , pp. 539-552
    • Huang, J.1    Furuya, A.2    Furuichi, T.3
  • 14
    • 33745621899 scopus 로고    scopus 로고
    • The docking protein Cas links tyrosine phosphorylation signaling to elongation of cerebellar granule cell axons
    • Huang J., Sakai R., and Furuichi T. The docking protein Cas links tyrosine phosphorylation signaling to elongation of cerebellar granule cell axons. Molecular Biology of the Cell 17 (2006) 3187-3196
    • (2006) Molecular Biology of the Cell , vol.17 , pp. 3187-3196
    • Huang, J.1    Sakai, R.2    Furuichi, T.3
  • 16
    • 33744945506 scopus 로고    scopus 로고
    • Cerebellar circuitry as a neuronal machine
    • Ito M. Cerebellar circuitry as a neuronal machine. Progress in Neurobiology 78 (2006) 272-303
    • (2006) Progress in Neurobiology , vol.78 , pp. 272-303
    • Ito, M.1
  • 18
    • 0042287970 scopus 로고    scopus 로고
    • Investigation of differentially expressed genes during the development of mouse cerebellum
    • Kagami Y., and Furuichi T. Investigation of differentially expressed genes during the development of mouse cerebellum. Gene Expression Patterns 1 (2001) 39-59
    • (2001) Gene Expression Patterns , vol.1 , pp. 39-59
    • Kagami, Y.1    Furuichi, T.2
  • 19
    • 0029591742 scopus 로고
    • Impaired synapse elimination during cerebellar development in PKC gamma mutant mice
    • Kano M., Hashimoto K., Chen C., Abeliovich A., Aiba A., Kurihara H., et al. Impaired synapse elimination during cerebellar development in PKC gamma mutant mice. Cell 83 (1995) 1223-1232
    • (1995) Cell , vol.83 , pp. 1223-1232
    • Kano, M.1    Hashimoto, K.2    Chen, C.3    Abeliovich, A.4    Aiba, A.5    Kurihara, H.6
  • 20
    • 33746910070 scopus 로고
    • Lajtha A. (Ed), Plenum Press, New York
    • Kaplan B.B. In: Lajtha A. (Ed). RNA-DNA hybridization: Analysis of gene expression. The handbook of neurochemistry Vol. 2 (1982), Plenum Press, New York 1-26
    • (1982) The handbook of neurochemistry , vol.2 , pp. 1-26
    • Kaplan, B.B.1
  • 21
    • 33746926595 scopus 로고
    • Current approaches to the study of gene expression in the adult and developing brain
    • Rassin D., Harber B., and Brujan B. (Eds), Alan R. Liss, Inc., New York
    • Kaplan B.B. Current approaches to the study of gene expression in the adult and developing brain. In: Rassin D., Harber B., and Brujan B. (Eds). Basic and clinical aspects of nutrition and brain development (1987), Alan R. Liss, Inc., New York 131-155
    • (1987) Basic and clinical aspects of nutrition and brain development , pp. 131-155
    • Kaplan, B.B.1
  • 22
    • 0000847978 scopus 로고    scopus 로고
    • Gene-expression profile of the ageing brain in mice
    • Lee C.K., Weidruch R., and Prolla T.A. Gene-expression profile of the ageing brain in mice. Nature Genetics 25 (2000) 294-297
    • (2000) Nature Genetics , vol.25 , pp. 294-297
    • Lee, C.K.1    Weidruch, R.2    Prolla, T.A.3
  • 23
    • 33846252240 scopus 로고    scopus 로고
    • Genome-wide atlas of gene expression in the adult mouse brain
    • Lein E.S., Hawrylycz M.J., Ao N., et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature 445 (2007) 168-176
    • (2007) Nature , vol.445 , pp. 168-176
    • Lein, E.S.1    Hawrylycz, M.J.2    Ao, N.3
  • 24
    • 1942457291 scopus 로고    scopus 로고
    • Defining a molecular atlas of the hippocampus using DNA microarrays and high-throughput in situ hybridization
    • Lein E.S., Zhao X., and Gage F.H. Defining a molecular atlas of the hippocampus using DNA microarrays and high-throughput in situ hybridization. Journal of Neuroscience 24 (2004) 3879-3889
    • (2004) Journal of Neuroscience , vol.24 , pp. 3879-3889
    • Lein, E.S.1    Zhao, X.2    Gage, F.H.3
  • 25
    • 3042631024 scopus 로고    scopus 로고
    • Gene regulation and DNA amage in the ageing human brain
    • Lu T., Pan Y., Kao S.Y., Li C., Kohane I., Chan J., et al. Gene regulation and DNA amage in the ageing human brain. Nature 429 (2004) 883-891
    • (2004) Nature , vol.429 , pp. 883-891
    • Lu, T.1    Pan, Y.2    Kao, S.Y.3    Li, C.4    Kohane, I.5    Chan, J.6
  • 26
    • 33750878798 scopus 로고    scopus 로고
    • BGEM: An in situ hybridization database of gene expression in the embryonic and adult mouse nervous system
    • Magdaleno S., Jensen P., Brumwell C.L., Seal A., Lehman K., Asbury A., et al. BGEM: An in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biology 4 (2006) 497-500
    • (2006) PLoS Biology , vol.4 , pp. 497-500
    • Magdaleno, S.1    Jensen, P.2    Brumwell, C.L.3    Seal, A.4    Lehman, K.5    Asbury, A.6
  • 27
    • 18944389045 scopus 로고    scopus 로고
    • Gene expression profiling during the embryonic development of mouse brain using an oligonucleotide-based microarray system
    • Matsuki T., Hori G., and Furuichi T. Gene expression profiling during the embryonic development of mouse brain using an oligonucleotide-based microarray system. Molecular Brain Research 136 (2005) 231-254
    • (2005) Molecular Brain Research , vol.136 , pp. 231-254
    • Matsuki, T.1    Hori, G.2    Furuichi, T.3
  • 31
    • 33847784737 scopus 로고    scopus 로고
    • Impaired cerebellar development and function in mice lacking CAPS2, a protein involved in neurotrophin release
    • Sadakata T., Kakegawa W., Mizoguchi A., Washida M., Katoh-Semba R., Shutoh F., et al. Impaired cerebellar development and function in mice lacking CAPS2, a protein involved in neurotrophin release. Journal of Neuroscience 27 (2007) 2472-2482
    • (2007) Journal of Neuroscience , vol.27 , pp. 2472-2482
    • Sadakata, T.1    Kakegawa, W.2    Mizoguchi, A.3    Washida, M.4    Katoh-Semba, R.5    Shutoh, F.6
  • 33
    • 34247334588 scopus 로고    scopus 로고
    • Alternative splicing variations in mouse CAPS2: differential expression and functional properties of splicing variants
    • Sadakata T., Washida M., and Furuichi T. Alternative splicing variations in mouse CAPS2: differential expression and functional properties of splicing variants. BMC Neuroscience 8 (2007) 25
    • (2007) BMC Neuroscience , vol.8 , pp. 25
    • Sadakata, T.1    Washida, M.2    Furuichi, T.3
  • 34
    • 33847788692 scopus 로고    scopus 로고
    • Autistic-like phenotypes in CADPS2/CAPS2 knockout mice and aberrant CADPS2 splicing in autistic patients
    • Sadakata T., Washida M., Iwayama Y., Shoji S., Sato Y., Ohkura T., et al. Autistic-like phenotypes in CADPS2/CAPS2 knockout mice and aberrant CADPS2 splicing in autistic patients. Journal of Clinical Investigation 117 (2007) 931-943
    • (2007) Journal of Clinical Investigation , vol.117 , pp. 931-943
    • Sadakata, T.1    Washida, M.2    Iwayama, Y.3    Shoji, S.4    Sato, Y.5    Ohkura, T.6
  • 36
    • 0033215993 scopus 로고    scopus 로고
    • Cupidin, an isoform of Homer/Vesl, interacts with the actin cytoskeleton and activated Rho family samall GTPases and is expressed in developing mouse cerebellar granule cells
    • Shiraishi Y., Mizutani A., Bito H., Fujisawa K., Narumiya S., Mikoshiba K., et al. Cupidin, an isoform of Homer/Vesl, interacts with the actin cytoskeleton and activated Rho family samall GTPases and is expressed in developing mouse cerebellar granule cells. Journal of Neuroscience 19 (1999) 8389-8400
    • (1999) Journal of Neuroscience , vol.19 , pp. 8389-8400
    • Shiraishi, Y.1    Mizutani, A.2    Bito, H.3    Fujisawa, K.4    Narumiya, S.5    Mikoshiba, K.6
  • 39
    • 0023704374 scopus 로고
    • mRNA in the Mammalian central nervous system
    • Sutcliffe J.G. mRNA in the Mammalian central nervous system. Annual Review of Neuroscience 11 (1988) 157-198
    • (1988) Annual Review of Neuroscience , vol.11 , pp. 157-198
    • Sutcliffe, J.G.1
  • 40
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology
    • The Gene Ontology Consortium. Gene ontology: Tool for the unification of biology. Nature Genetics 25 (2000) 25-29
    • (2000) Nature Genetics , vol.25 , pp. 25-29
    • The Gene Ontology Consortium1
  • 41
    • 5044239577 scopus 로고    scopus 로고
    • Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex
    • Toledo-Rodriguez M., Blumenfeld B., Wu C., Luo J., Attali B., Goodman P., et al. Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex. Cerebral Cortex 14 (2004) 1310-1327
    • (2004) Cerebral Cortex , vol.14 , pp. 1310-1327
    • Toledo-Rodriguez, M.1    Blumenfeld, B.2    Wu, C.3    Luo, J.4    Attali, B.5    Goodman, P.6
  • 42
    • 33745750936 scopus 로고    scopus 로고
    • Gene expression changes and molecular pathways mediating activity-dependent plasticity in visual cortex
    • Tropea D., Kreiman G., Lyckman A., Mukherjee S., Yu H., Horng S., et al. Gene expression changes and molecular pathways mediating activity-dependent plasticity in visual cortex. Nature Neuroscience 9 (2006) 660-668
    • (2006) Nature Neuroscience , vol.9 , pp. 660-668
    • Tropea, D.1    Kreiman, G.2    Lyckman, A.3    Mukherjee, S.4    Yu, H.5    Horng, S.6
  • 43
    • 0346494761 scopus 로고    scopus 로고
    • GenePaint.org: an atlas of gene expression patterns in the mouse embryo
    • Visel A., Thaller C., and Eichele G. GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Research 32 (2004) D552-D556
    • (2004) Nucleic Acids Research , vol.32
    • Visel, A.1    Thaller, C.2    Eichele, G.3
  • 45
    • 51049105082 scopus 로고    scopus 로고
    • Yoshikawa, F., Sato, Y., Tohyama, K., Akagai, T., Hashikawa, T., & Nagakura-Takagi, Y. et al. (2008). Opalin, a transmembrane sialyglycoprotein located in the CNS myelin paranodal loop membrane. Journal of Biological Chemistry, in press
    • Yoshikawa, F., Sato, Y., Tohyama, K., Akagai, T., Hashikawa, T., & Nagakura-Takagi, Y. et al. (2008). Opalin, a transmembrane sialyglycoprotein located in the CNS myelin paranodal loop membrane. Journal of Biological Chemistry, in press


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.