-
1
-
-
23044509495
-
Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila
-
Aminetzach Y.T., Macpherson J.M., and Petrov D.A. Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila. Science 309 5735 (2005) 764-767
-
(2005)
Science
, vol.309
, Issue.5735
, pp. 764-767
-
-
Aminetzach, Y.T.1
Macpherson, J.M.2
Petrov, D.A.3
-
2
-
-
7044269640
-
Molecular evidence for Pleistocene glacial cycles driving diversification of a North American desert spider, Agelenopsis aperta
-
Ayoub N.A., and Riechert S.E. Molecular evidence for Pleistocene glacial cycles driving diversification of a North American desert spider, Agelenopsis aperta. Mol. Ecol. 13 11 (2004) 3453-3465
-
(2004)
Mol. Ecol.
, vol.13
, Issue.11
, pp. 3453-3465
-
-
Ayoub, N.A.1
Riechert, S.E.2
-
3
-
-
2942689361
-
The lack of recombination drives the fixation of transposable elements on the fourth chromosome of Drosophila melanogaster
-
Bartolomé C., and Maside X. The lack of recombination drives the fixation of transposable elements on the fourth chromosome of Drosophila melanogaster. Genet. Res. 83 2 (2004) 91-100
-
(2004)
Genet. Res.
, vol.83
, Issue.2
, pp. 91-100
-
-
Bartolomé, C.1
Maside, X.2
-
4
-
-
34547471449
-
Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster
-
Bergman C.M., and Bensasson D. Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster. Proc. Natl. Acad. Sci. U. S. A. 104 27 (2007) 11340-11345
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, Issue.27
, pp. 11340-11345
-
-
Bergman, C.M.1
Bensasson, D.2
-
5
-
-
0037283681
-
Worldwide distribution of transposable element copy number in natural populations of Drosophila simulans
-
Biémont C., Nardon C., Deceliere G., Lepetit D., Loevenbruck C., and Vieira C. Worldwide distribution of transposable element copy number in natural populations of Drosophila simulans. Evolution Int. J. Org. Evolution 57 1 (2003) 159-167
-
(2003)
Evolution Int. J. Org. Evolution
, vol.57
, Issue.1
, pp. 159-167
-
-
Biémont, C.1
Nardon, C.2
Deceliere, G.3
Lepetit, D.4
Loevenbruck, C.5
Vieira, C.6
-
6
-
-
7444262495
-
A genealogical view of chromosomal evolution and species delimitation in the Drosophila virilis species subgroup
-
Caletka B.C., and McAllister B.F. A genealogical view of chromosomal evolution and species delimitation in the Drosophila virilis species subgroup. Mol. Phylogenet. Evol. 33 3 (2004) 664-670
-
(2004)
Mol. Phylogenet. Evol.
, vol.33
, Issue.3
, pp. 664-670
-
-
Caletka, B.C.1
McAllister, B.F.2
-
7
-
-
3242720690
-
World-wide survey of an Accord insertion and its association with DDT resistance in Drosophila melanogaster
-
Catania F., Kauer M.O., Daborn P.J., Yen J.L., Ffrench-Constant R.H., and Schlotterer C. World-wide survey of an Accord insertion and its association with DDT resistance in Drosophila melanogaster. Mol. Ecol. 13 8 (2004) 2491-2504
-
(2004)
Mol. Ecol.
, vol.13
, Issue.8
, pp. 2491-2504
-
-
Catania, F.1
Kauer, M.O.2
Daborn, P.J.3
Yen, J.L.4
Ffrench-Constant, R.H.5
Schlotterer, C.6
-
8
-
-
32044447172
-
Identification of transposable elements using multiple alignments of related genomes
-
Caspi A., and Pachter L. Identification of transposable elements using multiple alignments of related genomes. Genome Res. 16 2 (2006) 260-270
-
(2006)
Genome Res.
, vol.16
, Issue.2
, pp. 260-270
-
-
Caspi, A.1
Pachter, L.2
-
9
-
-
33750996144
-
Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): a perspective on North American desert biogeography
-
Castoe T.A., Spencer C.L., and Parkinson C.L. Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): a perspective on North American desert biogeography. Mol. Phylogenet. Evol. 42 1 (2007) 193-212
-
(2007)
Mol. Phylogenet. Evol.
, vol.42
, Issue.1
, pp. 193-212
-
-
Castoe, T.A.1
Spencer, C.L.2
Parkinson, C.L.3
-
10
-
-
0021077476
-
The population dynamics of transposable elements
-
Charlesworth B., and Charlesworth D. The population dynamics of transposable elements. Genet. Res. 42 (1983) 1-27
-
(1983)
Genet. Res.
, vol.42
, pp. 1-27
-
-
Charlesworth, B.1
Charlesworth, D.2
-
11
-
-
18344362984
-
Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China
-
Guo Z.T., et al. Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China. Nature 416 6877 (2002) 159-163
-
(2002)
Nature
, vol.416
, Issue.6877
, pp. 159-163
-
-
Guo, Z.T.1
-
12
-
-
0002836691
-
Chromosomal variation and evolution in the virilis group of Drosophila
-
Hsu T.C. Chromosomal variation and evolution in the virilis group of Drosophila. Univ. Tex. Publ. 5204 (1952) 35-72
-
(1952)
Univ. Tex. Publ.
, vol.5204
, pp. 35-72
-
-
Hsu, T.C.1
-
13
-
-
24944480648
-
Modeling the middle Pliocene climate with a global atmospheric general circulation model
-
Jiang D.B., Wang H.J., Ding Z.L., Lang X.M., and Drange H. Modeling the middle Pliocene climate with a global atmospheric general circulation model. J. Geophysical Res. 110 (2005) D14107
-
(2005)
J. Geophysical Res.
, vol.110
-
-
Jiang, D.B.1
Wang, H.J.2
Ding, Z.L.3
Lang, X.M.4
Drange, H.5
-
15
-
-
23844495158
-
Fixed and unstable I-related transposable elements in heterochromatin of Drosophila melanogaster
-
Junakovic N., Fortunati D., and Soriano S. Fixed and unstable I-related transposable elements in heterochromatin of Drosophila melanogaster. Cytogenet Genome Res. 110 1-4 (2005) 173-180
-
(2005)
Cytogenet Genome Res.
, vol.110
, Issue.1-4
, pp. 173-180
-
-
Junakovic, N.1
Fortunati, D.2
Soriano, S.3
-
16
-
-
0009102709
-
Transposable elements in Mendelian populations. III. Statistical Results
-
Kaplan N.L., and Brookfield J.F. Transposable elements in Mendelian populations. III. Statistical Results. Genetics 104 3 (1983) 485-495
-
(1983)
Genetics
, vol.104
, Issue.3
, pp. 485-495
-
-
Kaplan, N.L.1
Brookfield, J.F.2
-
17
-
-
0020966007
-
Transposable elements in Mendelian populations. I. A theory
-
Langley C.H., Brookfield J.F., and Kaplan N. Transposable elements in Mendelian populations. I. A theory. Genetics 104 3 (1983) 457-471
-
(1983)
Genetics
, vol.104
, Issue.3
, pp. 457-471
-
-
Langley, C.H.1
Brookfield, J.F.2
Kaplan, N.3
-
18
-
-
28044446960
-
Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome
-
Lipatov M., Lenkov K., Petrov D.A., and Bergman C.M. Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. BMC Biol. 3 (2005) 24
-
(2005)
BMC Biol.
, vol.3
, pp. 24
-
-
Lipatov, M.1
Lenkov, K.2
Petrov, D.A.3
Bergman, C.M.4
-
19
-
-
0027450385
-
Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition
-
Luan D.D., Korman M.H., Jakubczak J.L., and Eickbush T.H. Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition. Cell 72 4 (1993) 595-605
-
(1993)
Cell
, vol.72
, Issue.4
, pp. 595-605
-
-
Luan, D.D.1
Korman, M.H.2
Jakubczak, J.L.3
Eickbush, T.H.4
-
20
-
-
0032976398
-
The age and evolution of non-LTR retrotransposable elements
-
Malik H.S., Burke W.D., and Eickbush T.H. The age and evolution of non-LTR retrotransposable elements. Mol. Biol. Evol. 16 6 (1999) 793-805
-
(1999)
Mol. Biol. Evol.
, vol.16
, Issue.6
, pp. 793-805
-
-
Malik, H.S.1
Burke, W.D.2
Eickbush, T.H.3
-
21
-
-
0345040181
-
Evidence for an early opening of the Bering Strait
-
Marincovich L., and Gladenkov A.Y. Evidence for an early opening of the Bering Strait. Nature 397 4100 (1999) 149-151
-
(1999)
Nature
, vol.397
, Issue.4100
, pp. 149-151
-
-
Marincovich, L.1
Gladenkov, A.Y.2
-
22
-
-
0036792935
-
S-element insertions are associated with the evolution of the Hsp70 genes in Drosophila melanogaster
-
Maside X., Bartolomé C., and Charlesworth B. S-element insertions are associated with the evolution of the Hsp70 genes in Drosophila melanogaster. Curr. Biol. 12 19 (2002) 1686-1691
-
(2002)
Curr. Biol.
, vol.12
, Issue.19
, pp. 1686-1691
-
-
Maside, X.1
Bartolomé, C.2
Charlesworth, B.3
-
23
-
-
24644517947
-
Fixation of transposable elements in the Drosophila melanogaster genome
-
Maside X., Assimacopoulos S., and Charlesworth B. Fixation of transposable elements in the Drosophila melanogaster genome. Genet. Res. 85 3 (2005) 195-203
-
(2005)
Genet. Res.
, vol.85
, Issue.3
, pp. 195-203
-
-
Maside, X.1
Assimacopoulos, S.2
Charlesworth, B.3
-
24
-
-
0036008812
-
Chromosomal and allelic variation in Drosophila americana: selective maintenance of a chromosomal cline
-
McAllister B.F. Chromosomal and allelic variation in Drosophila americana: selective maintenance of a chromosomal cline. Genome 45 1 (2002) 13-21
-
(2002)
Genome
, vol.45
, Issue.1
, pp. 13-21
-
-
McAllister, B.F.1
-
25
-
-
33847034023
-
Phylogeographic patterns in Drosophila montana
-
Mirol P.M., et al. Phylogeographic patterns in Drosophila montana. Mol. Ecol. 16 5 (2007) 1085-1097
-
(2007)
Mol. Ecol.
, vol.16
, Issue.5
, pp. 1085-1097
-
-
Mirol, P.M.1
-
26
-
-
44849084772
-
Inferring the evolutionary history of Drosophila americana and D. novamexicana using a multilocus approach and the influence of chromosomal rearrangements in single gene analyses
-
Morales-Hojas R., Vieira C.P., and Vieira J. Inferring the evolutionary history of Drosophila americana and D. novamexicana using a multilocus approach and the influence of chromosomal rearrangements in single gene analyses. Mol. Ecol. 17 12 (2008) 2910-2926
-
(2008)
Mol. Ecol.
, vol.17
, Issue.12
, pp. 2910-2926
-
-
Morales-Hojas, R.1
Vieira, C.P.2
Vieira, J.3
-
27
-
-
0033288823
-
Sure facts, speculations, and open questions about the evolution of transposable element copy number
-
Nuzhdin S.V. Sure facts, speculations, and open questions about the evolution of transposable element copy number. Genetica 107 1-3 (1999) 129-137
-
(1999)
Genetica
, vol.107
, Issue.1-3
, pp. 129-137
-
-
Nuzhdin, S.V.1
-
28
-
-
0038247887
-
Size matters: non-LTR retrotransposable elements and ectopic recombination in Drosophila
-
Petrov D.A., Aminetzach Y.T., Davis J.C., Bensasson D., and Hirsh A.E. Size matters: non-LTR retrotransposable elements and ectopic recombination in Drosophila. Mol. Biol. Evol. 20 6 (2003) 880-892
-
(2003)
Mol. Biol. Evol.
, vol.20
, Issue.6
, pp. 880-892
-
-
Petrov, D.A.1
Aminetzach, Y.T.2
Davis, J.C.3
Bensasson, D.4
Hirsh, A.E.5
-
29
-
-
0031773680
-
MODELTEST: testing the model of DNA substitution
-
Posada D., and Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 14 9 (1998) 817-818
-
(1998)
Bioinformatics
, vol.14
, Issue.9
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
31
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 12 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
32
-
-
0028910659
-
Molecular phylogeny and divergence times of drosophilid species
-
Russo C.A., Takezaki N., and Nei M. Molecular phylogeny and divergence times of drosophilid species. Mol. Biol. Evol. 12 3 (1995) 391-404
-
(1995)
Mol. Biol. Evol.
, vol.12
, Issue.3
, pp. 391-404
-
-
Russo, C.A.1
Takezaki, N.2
Nei, M.3
-
33
-
-
1242274636
-
Strong selective sweep associated with a transposon insertion in Drosophila simulans
-
Schlenke T.A., and Begun D.J. Strong selective sweep associated with a transposon insertion in Drosophila simulans. Proc. Natl. Acad. Sci. U. S. A. 101 6 (2004) 1626-1631
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, Issue.6
, pp. 1626-1631
-
-
Schlenke, T.A.1
Begun, D.J.2
-
34
-
-
0036243079
-
Molecular phylogeny of the Drosophila virilis species group (Diptera: Drosophilidae) inferred from mitochondrial 12S and 16S ribosomal RNA genes
-
Spicer G.S., and Bell C.D. Molecular phylogeny of the Drosophila virilis species group (Diptera: Drosophilidae) inferred from mitochondrial 12S and 16S ribosomal RNA genes. Annals of ESA 95 2 (2002) 156-161
-
(2002)
Annals of ESA
, vol.95
, Issue.2
, pp. 156-161
-
-
Spicer, G.S.1
Bell, C.D.2
-
36
-
-
0036803223
-
Divergence time and evolutionary rate estimation with multilocus data
-
Thorne J.L., and Kishino H. Divergence time and evolutionary rate estimation with multilocus data. Syst. Biol. 51 5 (2002) 689-702
-
(2002)
Syst. Biol.
, vol.51
, Issue.5
, pp. 689-702
-
-
Thorne, J.L.1
Kishino, H.2
-
37
-
-
0000783306
-
-
Ashburner M., Carson H., and Thompson J.N.J. (Eds), Academic Press, London
-
Throckmorton L.H. In: Ashburner M., Carson H., and Thompson J.N.J. (Eds). The Virilis Species Group. The genetics and Biology of Drosophila Vol. 3b (1982), Academic Press, London
-
(1982)
The Virilis Species Group. The genetics and Biology of Drosophila
, vol.3 b
-
-
Throckmorton, L.H.1
-
38
-
-
1542380973
-
The late Miocene and Pliocene climate in East Asia as recorded by grain size and magnetic susceptibility of the Red Clay deposits (Chinese Loess Plateau)
-
Vandenberghe J., Lu H.Y., Sun D.H., van Huissteden J., and Konert M. The late Miocene and Pliocene climate in East Asia as recorded by grain size and magnetic susceptibility of the Red Clay deposits (Chinese Loess Plateau). Palaeo 204 3-4 (2004) 239-255
-
(2004)
Palaeo
, vol.204
, Issue.3-4
, pp. 239-255
-
-
Vandenberghe, J.1
Lu, H.Y.2
Sun, D.H.3
van Huissteden, J.4
Konert, M.5
-
39
-
-
0041817599
-
Inferences on the evolutionary history of the Drosophila americana polymorphic X/4 fusion from patterns of polymorphism at the X-linked paralytic and elav genes
-
Vieira C.P., Coelho P.A., and Vieira J. Inferences on the evolutionary history of the Drosophila americana polymorphic X/4 fusion from patterns of polymorphism at the X-linked paralytic and elav genes. Genetics 164 4 (2003) 1459-1469
-
(2003)
Genetics
, vol.164
, Issue.4
, pp. 1459-1469
-
-
Vieira, C.P.1
Coelho, P.A.2
Vieira, J.3
-
40
-
-
0036215197
-
Two divergent species of the virilis group, Drosophila littoralis and Drosophila virilis, share a replacement polymorphism at the fused locus
-
Vieira J. Two divergent species of the virilis group, Drosophila littoralis and Drosophila virilis, share a replacement polymorphism at the fused locus. Mol. Biol. Evol. 19 4 (2002) 579-581
-
(2002)
Mol. Biol. Evol.
, vol.19
, Issue.4
, pp. 579-581
-
-
Vieira, J.1
-
41
-
-
0033595547
-
X chromosome DNA variation in Drosophila virilis
-
Vieira J., and Charlesworth B. X chromosome DNA variation in Drosophila virilis. Proc. Biol. Sci. 266 1431 (1999) 1905-1912
-
(1999)
Proc. Biol. Sci.
, vol.266
, Issue.1431
, pp. 1905-1912
-
-
Vieira, J.1
Charlesworth, B.2
-
42
-
-
0035020912
-
Evidence for selection at the fused1 locus of Drosophila americana
-
Vieira J., McAllister B.F., and Charlesworth B. Evidence for selection at the fused1 locus of Drosophila americana. Genetics 158 1 (2001) 279-290
-
(2001)
Genetics
, vol.158
, Issue.1
, pp. 279-290
-
-
Vieira, J.1
McAllister, B.F.2
Charlesworth, B.3
-
43
-
-
33745615839
-
On the location of the gene(s) harbouring the advantageous variant that maintains the X /4 fusion of Drosophila americana
-
Vieira C.P., Almeida A., Dias J.D., and Vieira J. On the location of the gene(s) harbouring the advantageous variant that maintains the X /4 fusion of Drosophila americana. Genet. Res. 87 3 (2006) 163-174
-
(2006)
Genet. Res.
, vol.87
, Issue.3
, pp. 163-174
-
-
Vieira, C.P.1
Almeida, A.2
Dias, J.D.3
Vieira, J.4
-
44
-
-
33745843353
-
Molecular phylogeny of the Drosophila virilis section (Diptera: Drosophilidae) based on mitochondrial and nuclear sequences
-
Wang B.C., et al. Molecular phylogeny of the Drosophila virilis section (Diptera: Drosophilidae) based on mitochondrial and nuclear sequences. Mol. Phylogenet. Evol. 40 2 (2006) 484-500
-
(2006)
Mol. Phylogenet. Evol.
, vol.40
, Issue.2
, pp. 484-500
-
-
Wang, B.C.1
-
45
-
-
0034848170
-
DAMBE: software package for data analysis in molecular biology and evolution
-
Xia X., and Xie Z. DAMBE: software package for data analysis in molecular biology and evolution. J. Hered. 92 4 (2001) 371-373
-
(2001)
J. Hered.
, vol.92
, Issue.4
, pp. 371-373
-
-
Xia, X.1
Xie, Z.2
-
46
-
-
0035799685
-
Evolution of Asian monsoons and phased uplift of the Himalayan Tibetan plateau since Late Miocene times
-
Zhisheng A., Kutzbach J.E., Prell W.L., and Porter S.C. Evolution of Asian monsoons and phased uplift of the Himalayan Tibetan plateau since Late Miocene times. Nature 411 6833 (2001) 62-66
-
(2001)
Nature
, vol.411
, Issue.6833
, pp. 62-66
-
-
Zhisheng, A.1
Kutzbach, J.E.2
Prell, W.L.3
Porter, S.C.4
-
47
-
-
0030683599
-
PAML a program package for phylogenetic analysis by maximum likelihood
-
Yang Z. PAML a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13 5 (1997) 555-556
-
(1997)
Comput. Appl. Biosci.
, vol.13
, Issue.5
, pp. 555-556
-
-
Yang, Z.1
|