-
1
-
-
0037148758
-
The genome sequence of Schizosaccharomyces pombe
-
10.1038/nature724. 11859360
-
The genome sequence of Schizosaccharomyces pombe. V Wood R Gwilliam MA Rajandream M Lyne R Lyne A Stewart J Sgouros N Peat J Hayles S Baker D Basham S Bowman K Brooks D Brown S Brown T Chillingworth C Churcher M Collins R Connor A Cronin P Davis T Feltwell A Fraser S Gentles A Goble N Hamlin D Harris J Hidalgo G Hodgson S Holroyd, Nature 2002 415 6874 871 880 10.1038/nature724 11859360
-
(2002)
Nature
, vol.415
, Issue.6874
, pp. 871-880
-
-
Wood, V.1
Gwilliam, R.2
Rajandream, M.A.3
Lyne, M.4
Lyne, R.5
Stewart, A.6
Sgouros, J.7
Peat, N.8
Hayles, J.9
Baker, S.10
Basham, D.11
Bowman, S.12
Brooks, K.13
Brown, D.14
Brown, S.15
Chillingworth, T.16
Churcher, C.17
Collins, M.18
Connor, R.19
Cronin, A.20
Davis, P.21
Feltwell, T.22
Fraser, A.23
Gentles, S.24
Goble, A.25
Hamlin, N.26
Harris, D.27
Hidalgo, J.28
Hodgson, G.29
Holroyd, S.30
more..
-
2
-
-
0032804892
-
Origin of multicellular eukaryotes - insights from proteome comparisons
-
10.1016/S0959-437X(99)00028-3. 10607613
-
Origin of multicellular eukaryotes - insights from proteome comparisons. L Aravind G Subramanian, Curr Opin Genet Dev 1999 9 6 688 694 10.1016/S0959-437X(99)00028-3 10607613
-
(1999)
Curr Opin Genet Dev
, vol.9
, Issue.6
, pp. 688-694
-
-
Aravind, L.1
Subramanian, G.2
-
3
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
10.1038/35057062. 11237011
-
Initial sequencing and analysis of the human genome. ES Lander LM Linton B Birren C Nusbaum MC Zody J Baldwin K Devon K Dewar M Doyle W FitzHugh R Funke D Gage K Harris A Heaford J Howland L Kann J Lehoczky R LeVine P McEwan K McKernan J Meldrim JP Mesirov C Miranda W Morris J Naylor C Raymond M Rosetti R Santos A Sheridan C Sougnez, Nature 2001 409 6822 860 921 10.1038/35057062 11237011
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
Funke, R.11
Gage, D.12
Harris, K.13
Heaford, A.14
Howland, J.15
Kann, L.16
Lehoczky, J.17
Levine, R.18
McEwan, P.19
McKernan, K.20
Meldrim, J.21
Mesirov, J.P.22
Miranda, C.23
Morris, W.24
Naylor, J.25
Raymond, C.26
Rosetti, M.27
Santos, R.28
Sheridan, A.29
Sougnez, C.30
more..
-
4
-
-
0036544871
-
Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey
-
10.1038/ng852. 11925567
-
Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey. J Zhang YP Zhang HF Rosenberg, Nat Genet 2002 30 4 411 415 10.1038/ng852 11925567
-
(2002)
Nat Genet
, vol.30
, Issue.4
, pp. 411-415
-
-
Zhang, J.1
Zhang, Y.P.2
Rosenberg, H.F.3
-
5
-
-
14544286855
-
The selective cause of an ancient adaptation
-
10.1126/science.1106974. 15653464
-
The selective cause of an ancient adaptation. G Zhu GB Golding AM Dean, Science 2005 307 5713 1279 1282 10.1126/science.1106974 15653464
-
(2005)
Science
, vol.307
, Issue.5713
, pp. 1279-1282
-
-
Zhu, G.1
Golding, G.B.2
Dean, A.M.3
-
6
-
-
0034677669
-
Assessing annotation transfer for genomics: Quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores
-
10.1006/jmbi.2000.3550. 10704319
-
Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores. CA Wilson J Kreychman M Gerstein, J Mol Biol 2000 297 1 233 249 10.1006/jmbi.2000.3550 10704319
-
(2000)
J Mol Biol
, vol.297
, Issue.1
, pp. 233-249
-
-
Wilson, C.A.1
Kreychman, J.2
Gerstein, M.3
-
7
-
-
0034308142
-
Practical limits of function prediction
-
10.1002/1097-0134(20001001)41:1<98::AID-PROT120 3.0.CO;2-S. 10944397
-
Practical limits of function prediction. D Devos A Valencia, Proteins 2000 41 1 98 107 10.1002/1097-0134(20001001)41:1<98::AID-PROT120 3.0.CO;2-S 10944397
-
(2000)
Proteins
, vol.41
, Issue.1
, pp. 98-107
-
-
Devos, D.1
Valencia, A.2
-
8
-
-
0035815113
-
Evolution of function in protein superfamilies, from a structural perspective
-
10.1006/jmbi.2001.4513. 11286560
-
Evolution of function in protein superfamilies, from a structural perspective. AE Todd CA Orengo JM Thornton, J Mol Biol 2001 307 4 1113 1143 10.1006/jmbi.2001.4513 11286560
-
(2001)
J Mol Biol
, vol.307
, Issue.4
, pp. 1113-1143
-
-
Todd, A.E.1
Orengo, C.A.2
Thornton, J.M.3
-
9
-
-
0034033261
-
History of the enzyme nomenclature system
-
10.1093/bioinformatics/16.1.34. 10812475
-
History of the enzyme nomenclature system. K Tipton S Boyce, Bioinformatics 2000 16 1 34 40 10.1093/bioinformatics/16.1.34 10812475
-
(2000)
Bioinformatics
, vol.16
, Issue.1
, pp. 34-40
-
-
Tipton, K.1
Boyce, S.2
-
10
-
-
0032032781
-
Metabolic databases
-
10.1016/S0968-0004(98)01184-0. 9581504
-
Metabolic databases. PD Karp, Trends Biochem Sci 1998 23 3 114 116 10.1016/S0968-0004(98)01184-0 9581504
-
(1998)
Trends Biochem Sci
, vol.23
, Issue.3
, pp. 114-116
-
-
Karp, P.D.1
-
12
-
-
2942704016
-
Analysis of phenetic trees based on metabolic capabilites across the three domains of life
-
10.1016/j.jmb.2004.04.059. 15210350
-
Analysis of phenetic trees based on metabolic capabilites across the three domains of life. D Aguilar FX Aviles E Querol MJ Sternberg, J Mol Biol 2004 340 3 491 512 10.1016/j.jmb.2004.04.059 15210350
-
(2004)
J Mol Biol
, vol.340
, Issue.3
, pp. 491-512
-
-
Aguilar, D.1
Aviles, F.X.2
Querol, E.3
Sternberg, M.J.4
-
13
-
-
33745588868
-
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis
-
16684350. 10.1186/1471-2105-7-252
-
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis. Y Zhang S Li G Skogerbo Z Zhang X Zhu Z Zhang S Sun H Lu B Shi R Chen, BMC Bioinformatics 2006 7 252 16684350 10.1186/1471-2105-7-252
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 252
-
-
Zhang, Y.1
Li, S.2
Skogerbo, G.3
Zhang, Z.4
Zhu, X.5
Zhang, Z.6
Sun, S.7
Lu, H.8
Shi, B.9
Chen, R.10
-
14
-
-
33344460411
-
Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins
-
15998445. 10.1186/gb-2005-6-7-r56
-
Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins. S Freilich T Massingham S Bhattacharyya H Ponsting PA Lyons TC Freeman JM Thornton, Genome Biol 2005 6 7 R56 15998445 10.1186/gb-2005-6-7-r56
-
(2005)
Genome Biol
, vol.6
, Issue.7
, pp. 56
-
-
Freilich, S.1
Massingham, T.2
Bhattacharyya, S.3
Ponsting, H.4
Lyons, P.A.5
Freeman, T.C.6
Thornton, J.M.7
-
15
-
-
19444365047
-
The complement of enzymatic sets in different species
-
10.1016/j.jmb.2005.04.027. 15896806
-
The complement of enzymatic sets in different species. S Freilich RV Spriggs RA George B Al-Lazikani M Swindells JM Thornton, J Mol Biol 2005 349 4 745 763 10.1016/j.jmb.2005.04.027 15896806
-
(2005)
J Mol Biol
, vol.349
, Issue.4
, pp. 745-763
-
-
Freilich, S.1
Spriggs, R.V.2
George, R.A.3
Al-Lazikani, B.4
Swindells, M.5
Thornton, J.M.6
-
16
-
-
0033982936
-
KEGG: Kyoto encyclopedia of genes and genomes
-
10592173. 10.1093/nar/28.1.27
-
KEGG: kyoto encyclopedia of genes and genomes. M Kanehisa S Goto, Nucleic Acids Res 2000 28 1 27 30 10592173 10.1093/nar/28.1.27
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
17
-
-
33747139057
-
The outcomes of pathway database computations depend on pathway ontology
-
16893953. 10.1093/nar/gkl438
-
The outcomes of pathway database computations depend on pathway ontology. ML Green PD Karp, Nucleic Acids Res 2006 34 13 3687 3697 16893953 10.1093/nar/gkl438
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.13
, pp. 3687-3697
-
-
Green, M.L.1
Karp, P.D.2
-
18
-
-
0037350415
-
The phylogenetic extent of metabolic enzymes and pathways
-
12618373. 10.1101/gr.246903
-
The phylogenetic extent of metabolic enzymes and pathways. JM Peregrin-Alvarez S Tsoka CA Ouzounis, Genome Res 2003 13 3 422 427 12618373 10.1101/gr.246903
-
(2003)
Genome Res
, vol.13
, Issue.3
, pp. 422-427
-
-
Peregrin-Alvarez, J.M.1
Tsoka, S.2
Ouzounis, C.A.3
-
19
-
-
31844442032
-
Evolution of metabolic networks by gain and loss of enzymatic reactions in eukaryotes
-
10.1016/j.gene.2005.09.030. 16360290
-
Evolution of metabolic networks by gain and loss of enzymatic reactions in eukaryotes. T Tanaka K Ikeo T Gojobori, Gene 2006 365 88 94 10.1016/j.gene.2005.09.030 16360290
-
(2006)
Gene
, vol.365
, pp. 88-94
-
-
Tanaka, T.1
Ikeo, K.2
Gojobori, T.3
-
20
-
-
33745942567
-
Extraction of phylogenetic network modules from the metabolic network
-
16533389. 10.1186/1471-2105-7-130
-
Extraction of phylogenetic network modules from the metabolic network. T Yamada M Kanehisa S Goto, BMC Bioinformatics 2006 7 1 130 16533389 10.1186/1471-2105-7-130
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.1
, pp. 130
-
-
Yamada, T.1
Kanehisa, M.2
Goto, S.3
-
21
-
-
0032828663
-
Universal protein families and the functional content of the last universal common ancestor
-
10.1007/PL00006564. 10485999
-
Universal protein families and the functional content of the last universal common ancestor. N Kyrpides R Overbeek C Ouzounis, J Mol Evol 1999 49 4 413 423 10.1007/PL00006564 10485999
-
(1999)
J Mol Evol
, vol.49
, Issue.4
, pp. 413-423
-
-
Kyrpides, N.1
Overbeek, R.2
Ouzounis, C.3
-
23
-
-
13444262282
-
The humanization of N-glycosylation pathways in yeast
-
10.1038/nrmicro1087. 15685223
-
The humanization of N-glycosylation pathways in yeast. S Wildt TU Gerngross, Nat Rev Microbiol 2005 3 2 119 128 10.1038/nrmicro1087 15685223
-
(2005)
Nat Rev Microbiol
, vol.3
, Issue.2
, pp. 119-128
-
-
Wildt, S.1
Gerngross, T.U.2
-
24
-
-
3943059566
-
Roles of N-linked glycans in the endoplasmic reticulum
-
10.1146/annurev.biochem.73.011303.073752. 15189166
-
Roles of N-linked glycans in the endoplasmic reticulum. A Helenius M Aebi, Annu Rev Biochem 2004 73 1019 1049 10.1146/annurev.biochem.73.011303. 073752 15189166
-
(2004)
Annu Rev Biochem
, vol.73
, pp. 1019-1049
-
-
Helenius, A.1
Aebi, M.2
-
25
-
-
0032714568
-
Importance of glycosidases in mammalian glycoprotein biosynthesis
-
10580131
-
Importance of glycosidases in mammalian glycoprotein biosynthesis. A Herscovics, Biochim Biophys Acta 1999 1473 1 96 107 10580131
-
(1999)
Biochim Biophys Acta
, vol.1473
, Issue.1
, pp. 96-107
-
-
Herscovics, A.1
-
26
-
-
0034441282
-
The joys of HexNAc. the synthesis and function of N- and O-glycan branches
-
10.1023/A:1011010206774. 11421343
-
The joys of HexNAc. The synthesis and function of N- and O-glycan branches. H Schachter, Glycoconj J 2000 17 7-9 465 483 10.1023/A:1011010206774 11421343
-
(2000)
Glycoconj J
, vol.17
, Issue.7-9
, pp. 465-483
-
-
Schachter, H.1
-
28
-
-
0004155427
-
-
New York: W. H. Freeman
-
Biochemistry. L Stryer, New York: W. H. Freeman 4 1995
-
(1995)
Biochemistry
, vol.4
-
-
Stryer, L.1
-
29
-
-
0037762571
-
Biosynthesis and degradation of mammalian glycosphingolipids
-
12803917. 10.1098/rstb.2003.1265
-
Biosynthesis and degradation of mammalian glycosphingolipids. K Sandhoff T Kolter, Philos Trans R Soc Lond B Biol Sci 2003 358 1433 847 861 12803917 10.1098/rstb.2003.1265
-
(2003)
Philos Trans R Soc Lond B Biol Sci
, vol.358
, Issue.1433
, pp. 847-861
-
-
Sandhoff, K.1
Kolter, T.2
-
30
-
-
0037215494
-
Structure, organization, and function of glycosphingolipids in membrane
-
10.1097/00062752-200301000-00004. 12483107
-
Structure, organization, and function of glycosphingolipids in membrane. S Hakomori, Curr Opin Hematol 2003 10 1 16 24 10.1097/00062752-200301000-00004 12483107
-
(2003)
Curr Opin Hematol
, vol.10
, Issue.1
, pp. 16-24
-
-
Hakomori, S.1
-
31
-
-
0000625181
-
Molecular evolution of biomembranes: Structural equivalents and phylogenetic precursors of sterols
-
284408. 10.1073/pnas.76.2.847
-
Molecular evolution of biomembranes: structural equivalents and phylogenetic precursors of sterols. M Rohmer P Bouvier G Ourisson, Proc Natl Acad Sci USA 1979 76 2 847 851 284408 10.1073/pnas.76.2.847
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, Issue.2
, pp. 847-851
-
-
Rohmer, M.1
Bouvier, P.2
Ourisson, G.3
-
32
-
-
1242315614
-
Evolution of multicellularity in Metazoa: Comparative analysis of the subcellular localization of proteins in Saccharomyces, Drosophila and Caenorhabditis
-
10.1016/j.cellbi.2003.11.016. 14984742
-
Evolution of multicellularity in Metazoa: comparative analysis of the subcellular localization of proteins in Saccharomyces, Drosophila and Caenorhabditis. E Hazkani-Covo EY Levanon G Rotman D Graur A Novik, Cell Biol Int 2004 28 3 171 178 10.1016/j.cellbi.2003.11.016 14984742
-
(2004)
Cell Biol Int
, vol.28
, Issue.3
, pp. 171-178
-
-
Hazkani-Covo, E.1
Levanon, E.Y.2
Rotman, G.3
Graur, D.4
Novik, A.5
-
33
-
-
22944455558
-
BioLayout(Java): Versatile network visualisation of structural and functional relationships
-
10.2165/00822942-200504010-00009. 16000016
-
BioLayout(Java): versatile network visualisation of structural and functional relationships. L Goldovsky I Cases AJ Enright CA Ouzounis, Appl Bioinformatics 2005 4 1 71 74 10.2165/00822942-200504010-00009 16000016
-
(2005)
Appl Bioinformatics
, vol.4
, Issue.1
, pp. 71-74
-
-
Goldovsky, L.1
Cases, I.2
Enright, A.J.3
Ouzounis, C.A.4
|