-
1
-
-
0003604683
-
-
ASM Press, Washington
-
Enquist L.W., Krug R.M., Racaniello V.R., Skalka A.M., and Flint S.J. Principles of virology: molecular biology, pathogenesis, and control (2000), ASM Press, Washington
-
(2000)
Principles of virology: molecular biology, pathogenesis, and control
-
-
Enquist, L.W.1
Krug, R.M.2
Racaniello, V.R.3
Skalka, A.M.4
Flint, S.J.5
-
2
-
-
27744467626
-
Theoretical aspects of virus capsid assembly
-
Zlotnick A. Theoretical aspects of virus capsid assembly. J Mol Recognit 18 (2005) 479-490
-
(2005)
J Mol Recognit
, vol.18
, pp. 479-490
-
-
Zlotnick, A.1
-
3
-
-
73649156890
-
Physical principles in the construction of regular viruses
-
Caspar D.L.D., and Klug A. Physical principles in the construction of regular viruses. Cold Spring Harb Symp Quant Biol 27 (1962) 1-24
-
(1962)
Cold Spring Harb Symp Quant Biol
, vol.27
, pp. 1-24
-
-
Caspar, D.L.D.1
Klug, A.2
-
4
-
-
0035194351
-
Virus particle explorer (VIPER), a website for virus capsid structures and their computational analyses
-
Reddy V.S., Natarajan B., Okerberg B., Li K., Damodaran K., Morton R.T., et al. Virus particle explorer (VIPER), a website for virus capsid structures and their computational analyses. J Virol 75 (2001) 11943-11947
-
(2001)
J Virol
, vol.75
, pp. 11943-11947
-
-
Reddy, V.S.1
Natarajan, B.2
Okerberg, B.3
Li, K.4
Damodaran, K.5
Morton, R.T.6
-
6
-
-
0030669286
-
Encapsidated conformation of bacteriophage T7 DNA
-
Cerritelli M.E., Cheng N., Rosenberg A.H., McPherson C.E., Booy F.P., and Steven A.C. Encapsidated conformation of bacteriophage T7 DNA. Cell 91 (1997) 271-280
-
(1997)
Cell
, vol.91
, pp. 271-280
-
-
Cerritelli, M.E.1
Cheng, N.2
Rosenberg, A.H.3
McPherson, C.E.4
Booy, F.P.5
Steven, A.C.6
-
7
-
-
0032545188
-
Imaging RNA and dynamic protein segments with low-resolution virus crystallography: experimental design, data processing and implications of electron density maps
-
Tsuruta H., Reddy V.S., Wikoff W.R., and Johnson J.E. Imaging RNA and dynamic protein segments with low-resolution virus crystallography: experimental design, data processing and implications of electron density maps. J Mol Biol 284 (1998) 1439-1452
-
(1998)
J Mol Biol
, vol.284
, pp. 1439-1452
-
-
Tsuruta, H.1
Reddy, V.S.2
Wikoff, W.R.3
Johnson, J.E.4
-
8
-
-
0035165261
-
The structure of Pariacoto virus reveals a dodecahedral cage of duplex RNA
-
Tang L., Johnson K.N., Ball L.A., Lin T., Yeager M., and JE J. The structure of Pariacoto virus reveals a dodecahedral cage of duplex RNA. Nat Struct Biol 8 (2001) 77-83
-
(2001)
Nat Struct Biol
, vol.8
, pp. 77-83
-
-
Tang, L.1
Johnson, K.N.2
Ball, L.A.3
Lin, T.4
Yeager, M.5
JE, J.6
-
9
-
-
0042389769
-
Visualization by cryo-electron microscopy of genomic RNA that binds to the protein capsid inside bacteriophage MS2
-
Koning R., Worm S.V., Plaisier J.R., Duin J.V., Abrahams J.P., and Koerten H. Visualization by cryo-electron microscopy of genomic RNA that binds to the protein capsid inside bacteriophage MS2. J Mol Biol 332 (2001) 415-422
-
(2001)
J Mol Biol
, vol.332
, pp. 415-422
-
-
Koning, R.1
Worm, S.V.2
Plaisier, J.R.3
Duin, J.V.4
Abrahams, J.P.5
Koerten, H.6
-
10
-
-
52049123734
-
-
Hu Y, Zandi R, Knobler C, Gelbart W. Encapsidation of linear polyelectrolyte in a viral nanocontainer, In APS url http://meetings.aps.org/link/BAPS.2005.MAR.S22.14:2005.
-
Hu Y, Zandi R, Knobler C, Gelbart W. Encapsidation of linear polyelectrolyte in a viral nanocontainer, In APS url http://meetings.aps.org/link/BAPS.2005.MAR.S22.14:2005.
-
-
-
-
11
-
-
33845549219
-
Monodisperse polymer-virus hybrid nanoparticles
-
Sikkema F.D., Comellas-Aragones M., Fokkink R.G., Verduin B.J.M., Cornelissen J.J.L.M., and Nolte R.J.M. Monodisperse polymer-virus hybrid nanoparticles. Org Biol Chem 5 (2007) 54-57
-
(2007)
Org Biol Chem
, vol.5
, pp. 54-57
-
-
Sikkema, F.D.1
Comellas-Aragones, M.2
Fokkink, R.G.3
Verduin, B.J.M.4
Cornelissen, J.J.L.M.5
Nolte, R.J.M.6
-
12
-
-
33645290922
-
Physics of RNA and viral assembly
-
An excellent review on the self-assembly of ssRNa viruses with focus on the genome lateral organization, thermodynamics, and the growing scenario.
-
Bruinsma R.F. Physics of RNA and viral assembly. Eur Phys J E 19 (2006) 303-310. An excellent review on the self-assembly of ssRNa viruses with focus on the genome lateral organization, thermodynamics, and the growing scenario.
-
(2006)
Eur Phys J E
, vol.19
, pp. 303-310
-
-
Bruinsma, R.F.1
-
13
-
-
0029148982
-
Double-stranded DNA organization in bacteriophage heads: an alternative toroid-based model
-
Hud N.V. Double-stranded DNA organization in bacteriophage heads: an alternative toroid-based model. Biophys J 59 (1995) 1355-1362
-
(1995)
Biophys J
, vol.59
, pp. 1355-1362
-
-
Hud, N.V.1
-
14
-
-
0031688164
-
Hexagonally packed DNA within bacteriophage T7 stabilized by curvature stress
-
Odijk T. Hexagonally packed DNA within bacteriophage T7 stabilized by curvature stress. Biophys J 75 (1998) 1223-1227
-
(1998)
Biophys J
, vol.75
, pp. 1223-1227
-
-
Odijk, T.1
-
16
-
-
0037340654
-
Forces and pressures in DNA packaging and release from viral capsids
-
The interplay between bending and repulsion energies of packaged dsDNA for the determination of the structural and thermodynamics properties of viruses was investigated theoretically. A condensated state of a hexagonal array represented the profile of the encapsidated genome.
-
Tzlil S., Kindt J.T., Gelbart W.M., and Ben-Shaul A. Forces and pressures in DNA packaging and release from viral capsids. Biophys J 84 (2003) 1616-1627. The interplay between bending and repulsion energies of packaged dsDNA for the determination of the structural and thermodynamics properties of viruses was investigated theoretically. A condensated state of a hexagonal array represented the profile of the encapsidated genome.
-
(2003)
Biophys J
, vol.84
, pp. 1616-1627
-
-
Tzlil, S.1
Kindt, J.T.2
Gelbart, W.M.3
Ben-Shaul, A.4
-
18
-
-
5644277797
-
Helical packaging of semiflexible polymers in bacteriophages
-
Metzler R., and Dommersnes P.G. Helical packaging of semiflexible polymers in bacteriophages. Eur Biophys J 33 (2004) 497-505
-
(2004)
Eur Biophys J
, vol.33
, pp. 497-505
-
-
Metzler, R.1
Dommersnes, P.G.2
-
19
-
-
21244473581
-
Forces during bacteriophage DNA packaging and ejection
-
The force experienced by the dsDNA during the packing in and the ejection from bacteriophage was theoretically investigated by minimizing the free energy of the packaged genome. Their dependence on the ionic strength and the size of the viral capsid were also predicted.
-
Purohit P.K., Inamdar M.M., Grayson P.D., Squires T.M., and Kondev J. Forces during bacteriophage DNA packaging and ejection. Biophys J 88 (2005) 851-866. The force experienced by the dsDNA during the packing in and the ejection from bacteriophage was theoretically investigated by minimizing the free energy of the packaged genome. Their dependence on the ionic strength and the size of the viral capsid were also predicted.
-
(2005)
Biophys J
, vol.88
, pp. 851-866
-
-
Purohit, P.K.1
Inamdar, M.M.2
Grayson, P.D.3
Squires, T.M.4
Kondev, J.5
-
20
-
-
52049099537
-
-
Li Z, Wu J, Wang Z-G. Osmotic pressure and packaging structure of caged DNA. Biophys J in press.
-
Li Z, Wu J, Wang Z-G. Osmotic pressure and packaging structure of caged DNA. Biophys J in press.
-
-
-
-
21
-
-
0037058959
-
Investigation of viral DNA packaging using molecular mechanics models
-
Arsuaga J., Tan R.K.-Z., Vasquez M., Sumners D.W., and Harvey S.C. Investigation of viral DNA packaging using molecular mechanics models. Biophys Chem 101-102 (2002) 475-484
-
(2002)
Biophys Chem
, vol.101-102
, pp. 475-484
-
-
Arsuaga, J.1
Tan, R.K.-Z.2
Vasquez, M.3
Sumners, D.W.4
Harvey, S.C.5
-
22
-
-
0038385492
-
Thermodynamics of DNA packaging inside a viral capsid: the role of DNA intrinsic thickness
-
Marenduzzo D., and Micheletti C. Thermodynamics of DNA packaging inside a viral capsid: the role of DNA intrinsic thickness. J Mol Biol 330 (2003) 485-492
-
(2003)
J Mol Biol
, vol.330
, pp. 485-492
-
-
Marenduzzo, D.1
Micheletti, C.2
-
23
-
-
1242336964
-
Packing double-helical DNA into viral capsids
-
Molecular dynamics simulations were performed to investigate the dsDNA packaging in bacteriophages during the loading process. A spool-like structure consisting from three non-coaxial layers was reported.
-
LaMarque J.C., Le T.-vL., and Harvey S.C. Packing double-helical DNA into viral capsids. Biopolymers 73 (2004) 348-355. Molecular dynamics simulations were performed to investigate the dsDNA packaging in bacteriophages during the loading process. A spool-like structure consisting from three non-coaxial layers was reported.
-
(2004)
Biopolymers
, vol.73
, pp. 348-355
-
-
LaMarque, J.C.1
Le, T.-vL.2
Harvey, S.C.3
-
24
-
-
22244483736
-
DNA Packaging in bacteriophage: Is twist Important?
-
Spakowitz A.J., and Wang Z.-G. DNA Packaging in bacteriophage: Is twist Important?. Biophys J 88 (2005) 3912-3923
-
(2005)
Biophys J
, vol.88
, pp. 3912-3923
-
-
Spakowitz, A.J.1
Wang, Z.-G.2
-
25
-
-
33645991802
-
Monte Carlo simulations of polyelectrolytes inside virial capsids
-
Monte Carlo simulations of a scaled-down virus model with explicit counterions were performed to determine the structure and thermodynamics of polyelectrolyte encapsidation.
-
Angelescu D.G., Bruinsma R., and Linse P. Monte Carlo simulations of polyelectrolytes inside virial capsids. Phys Rev E 73 (2006) 041921. Monte Carlo simulations of a scaled-down virus model with explicit counterions were performed to determine the structure and thermodynamics of polyelectrolyte encapsidation.
-
(2006)
Phys Rev E
, vol.73
, pp. 041921
-
-
Angelescu, D.G.1
Bruinsma, R.2
Linse, P.3
-
26
-
-
33646920317
-
Polymer packaging and ejection in viral capsids: shape matters
-
Ali I., Marenduzzo D., and Yeomans J.M. Polymer packaging and ejection in viral capsids: shape matters. Phys Rev Lett 96 (2006) 208102
-
(2006)
Phys Rev Lett
, vol.96
, pp. 208102
-
-
Ali, I.1
Marenduzzo, D.2
Yeomans, J.M.3
-
27
-
-
33745759318
-
Langevin dynamics simulation of genome packing in bacteriophage
-
Langevin dynamics simulations of polyelectrolyte packaging into a icosahedral container have been made. The stochastic character of the packaging at high loading genome fraction was revealed.
-
Forrey C., and Muthukumar M. Langevin dynamics simulation of genome packing in bacteriophage. Biophys J 91 (2006) 25-41. Langevin dynamics simulations of polyelectrolyte packaging into a icosahedral container have been made. The stochastic character of the packaging at high loading genome fraction was revealed.
-
(2006)
Biophys J
, vol.91
, pp. 25-41
-
-
Forrey, C.1
Muthukumar, M.2
-
28
-
-
33846113838
-
Structural and thermodynamic principles of viral packaging
-
Molecular dynamics simulations were used to analyze the structure and thermodynamics of dsDNA conformations. The authors also compared the structural organization of dsDNA in a single capsid with the profile obtained by averaging over a large number of individual conformations.
-
Petrov A.S., and Harvey S.C. Structural and thermodynamic principles of viral packaging. Structure 15 (2007) 21-27. Molecular dynamics simulations were used to analyze the structure and thermodynamics of dsDNA conformations. The authors also compared the structural organization of dsDNA in a single capsid with the profile obtained by averaging over a large number of individual conformations.
-
(2007)
Structure
, vol.15
, pp. 21-27
-
-
Petrov, A.S.1
Harvey, S.C.2
-
29
-
-
34447260515
-
Packaging of DNA by bacteriophage epsilon 15: structure, forces, and thermodynamics
-
Petrov A.S., Lim-Hing K., and Harvey S.C. Packaging of DNA by bacteriophage epsilon 15: structure, forces, and thermodynamics. Structure 15 (2007) 807-812
-
(2007)
Structure
, vol.15
, pp. 807-812
-
-
Petrov, A.S.1
Lim-Hing, K.2
Harvey, S.C.3
-
30
-
-
0037117517
-
Knotting probability of DNA molecules confined in restricted volumes: DNA knotting in phage capsids
-
Arsuaga J., Vasquez M., Trigueros S., Sumners D.W., and Roca J. Knotting probability of DNA molecules confined in restricted volumes: DNA knotting in phage capsids. Proc Natl Acad Sci 99 (2002) 5373-5377
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 5373-5377
-
-
Arsuaga, J.1
Vasquez, M.2
Trigueros, S.3
Sumners, D.W.4
Roca, J.5
-
31
-
-
21544474118
-
DNA knots reveal i chiral organization of DNA in phase capsids
-
Arsuaga J., Vasquez M., McGurik P., Trigueros S., Sumners D.W., and Roca J. DNA knots reveal i chiral organization of DNA in phase capsids. Proc Natl Acad Sci 102 (2005) 9165-9169
-
(2005)
Proc Natl Acad Sci
, vol.102
, pp. 9165-9169
-
-
Arsuaga, J.1
Vasquez, M.2
McGurik, P.3
Trigueros, S.4
Sumners, D.W.5
Roca, J.6
-
32
-
-
27944504802
-
Electrostatics and the assembly of an RNA virus
-
van der Schoot P., and Bruinsma R. Electrostatics and the assembly of an RNA virus. Phys Rev E 71 (2005) 061928
-
(2005)
Phys Rev E
, vol.71
, pp. 061928
-
-
van der Schoot, P.1
Bruinsma, R.2
-
33
-
-
33751235599
-
Electrostatic origin of the genome packing in viruses
-
Belyi V.A., and Muthukumar M. Electrostatic origin of the genome packing in viruses. Proc Natl Acad Sci 103 (2006) 17174-17178
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 17174-17178
-
-
Belyi, V.A.1
Muthukumar, M.2
-
35
-
-
7544243334
-
Electrostatic interaction between RNA and protein capsid in Cowpea Chlorotic Mottle virus simulated by a coarse-grain RNA model and a Monte Carlo approach
-
Zhang D., Konecny R., Baker N.A., and McCammon J.A. Electrostatic interaction between RNA and protein capsid in Cowpea Chlorotic Mottle virus simulated by a coarse-grain RNA model and a Monte Carlo approach. Biopolymers 75 (2004) 323-337
-
(2004)
Biopolymers
, vol.75
, pp. 323-337
-
-
Zhang, D.1
Konecny, R.2
Baker, N.A.3
McCammon, J.A.4
-
36
-
-
33644848399
-
Molecular dynamics simulations of the complete satellite tobacco mosaic virus
-
An all-atom molecular dynamics simulation of a complete T = 1 virus with emphasis on the genome organization and the capsid stability.
-
Freddolino P.L., Arkhipov A.S., Larson S.B., McPherson A., and Schulten K. Molecular dynamics simulations of the complete satellite tobacco mosaic virus. Structure 14 (2006) 437-449. An all-atom molecular dynamics simulation of a complete T = 1 virus with emphasis on the genome organization and the capsid stability.
-
(2006)
Structure
, vol.14
, pp. 437-449
-
-
Freddolino, P.L.1
Arkhipov, A.S.2
Larson, S.B.3
McPherson, A.4
Schulten, K.5
-
37
-
-
34347326953
-
Monte Carlo simulations of flexible polyelectrolytes inside viral capsids with dodecahedral charge distribution
-
Angelescu D.G., and Linse P. Monte Carlo simulations of flexible polyelectrolytes inside viral capsids with dodecahedral charge distribution. Phys Rev E 75 (2007) 051905
-
(2007)
Phys Rev E
, vol.75
, pp. 051905
-
-
Angelescu, D.G.1
Linse, P.2
-
38
-
-
34547652543
-
Packaging of flexible polyelectrolytes inside a virial capsid: effect of salt concentration and salt valence
-
Angelescu D.G., Stenhammar J., and Linse P. Packaging of flexible polyelectrolytes inside a virial capsid: effect of salt concentration and salt valence. J Phys Chem B 111 (2007) 8477-8485
-
(2007)
J Phys Chem B
, vol.111
, pp. 8477-8485
-
-
Angelescu, D.G.1
Stenhammar, J.2
Linse, P.3
-
40
-
-
33644541468
-
Spatial distribution of polyelectrolyte and counterions in nanocapsules: a computer simulation study
-
Stukan M.R., Lobaskin V., Holm C., and Vinogradova O.I. Spatial distribution of polyelectrolyte and counterions in nanocapsules: a computer simulation study. Phys Rev E 73 (2006) 021801
-
(2006)
Phys Rev E
, vol.73
, pp. 021801
-
-
Stukan, M.R.1
Lobaskin, V.2
Holm, C.3
Vinogradova, O.I.4
-
41
-
-
33751119322
-
The many facets of polyelectrolytes and oppsitely charged macroions complex formation
-
Ulrich S., Seijo M., and Stoll S. The many facets of polyelectrolytes and oppsitely charged macroions complex formation. Curr Opin Colloid Inteface Sci 11 (2006) 268-272
-
(2006)
Curr Opin Colloid Inteface Sci
, vol.11
, pp. 268-272
-
-
Ulrich, S.1
Seijo, M.2
Stoll, S.3
-
42
-
-
0001355519
-
Brownian motion and polymer statistics on certain curved manifolds
-
Mondescu R.P., and Muthukumar M. Brownian motion and polymer statistics on certain curved manifolds. Phys. Rev E 57 (1998) 4411-4419
-
(1998)
Phys. Rev E
, vol.57
, pp. 4411-4419
-
-
Mondescu, R.P.1
Muthukumar, M.2
-
43
-
-
17344388398
-
Semiflexible polymer confined to a spherical surface
-
Spakowitz A.J., and Wang Z.-G. Semiflexible polymer confined to a spherical surface. Phys Rev Lett 91 (2003) 166102
-
(2003)
Phys Rev Lett
, vol.91
, pp. 166102
-
-
Spakowitz, A.J.1
Wang, Z.-G.2
-
44
-
-
14644425226
-
Excluded volume effects on polymer chains confined to spherical surfaces
-
Cerdà J.J., Sintes T., and Chakrabarti A. Excluded volume effects on polymer chains confined to spherical surfaces. Macromolecules 38 (2005) 1469-1477
-
(2005)
Macromolecules
, vol.38
, pp. 1469-1477
-
-
Cerdà, J.J.1
Sintes, T.2
Chakrabarti, A.3
-
45
-
-
35548932556
-
A statistical approach to close packing of elastic rods and to DNA packaging in viral capsids
-
Katzav E., Adda-Bedia M., and Boudaoud M. A statistical approach to close packing of elastic rods and to DNA packaging in viral capsids. Proc Natl Acad Sci 103 (2006) 18900-18904
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 18900-18904
-
-
Katzav, E.1
Adda-Bedia, M.2
Boudaoud, M.3
-
46
-
-
33748291441
-
On the connected-charges Thomson problem
-
Slosar A., and Podgornik R. On the connected-charges Thomson problem. Europhys Lett 75 (2006) 631-637
-
(2006)
Europhys Lett
, vol.75
, pp. 631-637
-
-
Slosar, A.1
Podgornik, R.2
-
47
-
-
52049090513
-
-
Angelescu DG, Linse P, Nguyen TT, Bruinsma RF. Structural transitions of encapsidated polyelectrolyte. Eur Phys J E 2007, Submitted.
-
Angelescu DG, Linse P, Nguyen TT, Bruinsma RF. Structural transitions of encapsidated polyelectrolyte. Eur Phys J E 2007, Submitted.
-
-
-
-
48
-
-
52049113382
-
-
Siber, A, Podgornik R. Electrostatic limitations on encapsidation of single-stranded viral RNA molecules. Phys Rev E in press.
-
Siber, A, Podgornik R. Electrostatic limitations on encapsidation of single-stranded viral RNA molecules. Phys Rev E in press.
-
-
-
-
50
-
-
11444252007
-
Monte Carlo simulations of defect free crosslinked gels in the presence of salt
-
Edgecombe S., Schneider S., and Linse P. Monte Carlo simulations of defect free crosslinked gels in the presence of salt. Macromolecules 37 (2004) 10089-10100
-
(2004)
Macromolecules
, vol.37
, pp. 10089-10100
-
-
Edgecombe, S.1
Schneider, S.2
Linse, P.3
-
51
-
-
0033184831
-
Supramolecular self-assembly: molecular dynamics modeling of polyedal shell formation
-
Rapaport D.C., Johnson J.E., and Skolnic J. Supramolecular self-assembly: molecular dynamics modeling of polyedal shell formation. Comp Phys Comm 121-122 (1999) 231-235
-
(1999)
Comp Phys Comm
, vol.121-122
, pp. 231-235
-
-
Rapaport, D.C.1
Johnson, J.E.2
Skolnic, J.3
-
52
-
-
38349040438
-
Self-assembly of polyhedral shells: a molecular dynamics study
-
The contribution describes how capsomers represented by polyhedral tiles self-assemble in a closed icosahedral structure.
-
Rapaport D.C. Self-assembly of polyhedral shells: a molecular dynamics study. Phys Rev E 70 (2004) 051905. The contribution describes how capsomers represented by polyhedral tiles self-assemble in a closed icosahedral structure.
-
(2004)
Phys Rev E
, vol.70
, pp. 051905
-
-
Rapaport, D.C.1
-
53
-
-
33847712647
-
Decipheringthe kinetic mechanism of spontaneous self-assembly of icosahedral capsids
-
Discontinuous molecular dynamics simulation was performed to determine the phase diagram of a solution of capsomers.
-
Nguyen H.D., Reddy V.S., and Brooks C.L. Decipheringthe kinetic mechanism of spontaneous self-assembly of icosahedral capsids. Nano Lett 7 (2007) 338-344. Discontinuous molecular dynamics simulation was performed to determine the phase diagram of a solution of capsomers.
-
(2007)
Nano Lett
, vol.7
, pp. 338-344
-
-
Nguyen, H.D.1
Reddy, V.S.2
Brooks, C.L.3
-
54
-
-
33646150440
-
Simulation study of the contribution of oligomer/oligomer binding to capsid assembly kinetics
-
Zhang T., and Schwartz R. Simulation study of the contribution of oligomer/oligomer binding to capsid assembly kinetics. Biophys J 90 (2006) 57-64
-
(2006)
Biophys J
, vol.90
, pp. 57-64
-
-
Zhang, T.1
Schwartz, R.2
-
55
-
-
33745787907
-
Dynamic pathways for viral capsid assembly
-
Hagan M.F., and Chandler D. Dynamic pathways for viral capsid assembly. Biophys J 91 (2006) 42-54
-
(2006)
Biophys J
, vol.91
, pp. 42-54
-
-
Hagan, M.F.1
Chandler, D.2
-
56
-
-
33845204189
-
Stability and dynamics of virus capsids described by coarse-grained modeling
-
The stability of empty capsids was evaluated by means of molecular dynamics simulation. A careful coarse-graining of the capsomer calibrated with all-atom simulation was carried out.
-
Arkhipov A., Freddolino P.L., and Schulten K. Stability and dynamics of virus capsids described by coarse-grained modeling. Structure 14 (2006) 1767-1777. The stability of empty capsids was evaluated by means of molecular dynamics simulation. A careful coarse-graining of the capsomer calibrated with all-atom simulation was carried out.
-
(2006)
Structure
, vol.14
, pp. 1767-1777
-
-
Arkhipov, A.1
Freddolino, P.L.2
Schulten, K.3
-
57
-
-
18044389910
-
Icosahedral packing of RNA viral genomes
-
Rudnick J., and Bruinsma R. Icosahedral packing of RNA viral genomes. Phys Rev Lett 94 (2005) 038101
-
(2005)
Phys Rev Lett
, vol.94
, pp. 038101
-
-
Rudnick, J.1
Bruinsma, R.2
-
58
-
-
34247556949
-
Kinetics of viral self-assembly: the role of ss RNA antenna
-
Hu T., and Shklovskii B.I. Kinetics of viral self-assembly: the role of ss RNA antenna. Phys Rev E 75 (2007) 051901
-
(2007)
Phys Rev E
, vol.75
, pp. 051901
-
-
Hu, T.1
Shklovskii, B.I.2
|