Electrostatic interaction between RNA and protein capsid in cowpea chlorotic mottle virus simulated by a coarse-grain RNA model and a Monte Carlo approach

Biopolymers

Volumn 75, Issue 4, 2004, Pages 325-337

  Zhang, Deqiang ^a   Konecny, Robert ^a   Baker, Nathan A ^b   McCammon, J Andrew ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Cowpea chlorotic mottle virus; Electrostatic potential; Monte Carlo; Poisson Boltzmann equation; RNA coarse grain model; Simulation

Indexed keywords

BINDING ENERGY; COMPUTER SIMULATION; ELECTROSTATICS; MONTE CARLO METHODS; PROTEINS; VIRUSES;

CAPSID; COWPEAS; ELECTROSTATIC INTERACTIONS; ICOSAHEDRAL ORGANIZATION;

RNA;

CAPSID PROTEIN; DIMER; NUCLEIC ACID;

AMINO TERMINAL SEQUENCE; ARTICLE; COWPEA CHLOROTIC MOTTLE VIRUS; CRYSTALLIZATION; DENSITY; DNA CONFORMATION; ENERGY; MOLECULAR MODEL; MONTE CARLO METHOD; NONHUMAN; PLANT VIRUS; PROTEIN RNA BINDING; PROTEIN STRUCTURE; RNA CONFORMATION; RNA VIRUS; VIRUS ASSEMBLY; X RAY CRYSTALLOGRAPHY;

BROMOVIRUS; CAPSID PROTEINS; ELECTROSTATICS; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; MONTE CARLO METHOD; RNA, VIRAL; VIRUS ASSEMBLY;

COWPEA CHLOROTIC MOTTLE VIRUS; RNA VIRUSES;

EID: 7544243334     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/bip.20120     Document Type: Article

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