-
1
-
-
0037007636
-
A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont
-
DOI 10.1038/417063a
-
Harald Huber, Michael J. Hohn, Reinhard Rachel, Tanja Fuchs, Verena C. Wimmer, Karl O. Stetter, A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont. Nature 417, 63-67 (2002) (Pubitemid 34498815)
-
(2002)
Nature
, vol.417
, Issue.6884
, pp. 63-67
-
-
Huber, H.1
Hohn, M.J.2
Rachel, R.3
Fuchs, T.4
Wimmer, V.C.5
Stetter, K.O.6
-
2
-
-
0242300069
-
The genome of Nanoarchaeum equitans: Insights into early archaeal evolution and derived parasitism
-
DOI 10.1073/pnas.1735403100
-
Elizabeth Waters, Michael J. Hohn, Ivan Ahel, David E. Graham, Mark D. Adams, Mary Barnstead, Karen Y. Beeson, Lisa Bibbs, Randall Bolanos, Martin Keller, Keith Kretz, Xiaoying Lin, Eric Mathur, Jingwei Ni, Mircea Podar, Toby Richardson, Granger G. Sutton, Melvin Simon, Dieter Söll , Karl O. Stetter, Jay M. Short, Michiel Noordewier. The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism. Proc. Natl. Acad. Sci. U.S.A. 100, 12984-12988 (2003) (Pubitemid 37340012)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.22
, pp. 12984-12988
-
-
Waters, E.1
Hohn, M.J.2
Ahel, I.3
Graham, D.E.4
Adams, M.D.5
Barnstead, M.6
Beeson, K.Y.7
Bibbs, L.8
Bolanos, R.9
Keller, M.10
Kretz, K.11
Lin, X.12
Mathur, E.13
Ni, J.14
Podar, M.15
Richardson, T.16
Sutton, G.G.17
Simon, M.18
Soll, D.19
Stetter, K.O.20
Short, J.M.21
Noordewier, M.22
more..
-
3
-
-
13444251251
-
Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5′- and 3′-halves
-
Lennart Randau, Michael Pearson, Dieter Soll, D., Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5′- and 3′-halves. Nature 433, 537-541 (2005)
-
(2005)
Nature
, vol.433
, pp. 537-541
-
-
Lennart Randau, M.P.1
Dieter Soll, D.2
-
4
-
-
19444384556
-
The complete set of tRNA species in Nanoarchaeum equitans
-
DOI 10.1016/j.febslet.2005.04.051, PII S0014579305005272
-
Lennart Randau, Michael Pearson,Dieter Soll,The complete set of tRNA species in Nanoarchaeum equitans. FEBS 579, 2945-2947 (2005) (Pubitemid 40725271)
-
(2005)
FEBS Letters
, vol.579
, Issue.13
, pp. 2945-2947
-
-
Randau, L.1
Pearson, M.2
Soll, D.3
-
5
-
-
33646248891
-
The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the Last Universal Common Ancestor (LUCA)
-
Massimo Di Giulio, The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the Last Universal Common Ancestor (LUCA). J. Theor. Biol. 240, 343-352 (2006)
-
(2006)
J. Theor. Biol.
, vol.240
, pp. 343-352
-
-
Di Giulio, M.1
-
6
-
-
33746903166
-
Nanoarchaeum equitans is a living fossil
-
DOI 10.1016/j.jtbi.2006.01.034, PII S0022519306000555
-
Massimo Di Giulio, Nanoarchaeum equitans is a living fossil. J. Theor. Biol. 242, 257-260. (2006) (Pubitemid 44188773)
-
(2006)
Journal of Theoretical Biology
, vol.242
, Issue.1
, pp. 257-260
-
-
Di Giulio, M.1
-
7
-
-
34548471983
-
The tree of life might be rooted in the branch leading to Nanoarchaeota
-
DOI 10.1016/j.gene.2007.07.004, PII S0378111907003691
-
Massimo Di Giulio, The tree of life might be rooted in the branch leading to Nanoarchaeota. Gene, 401, 108-113 (2007) (Pubitemid 47379518)
-
(2007)
Gene
, vol.401
, Issue.1-2
, pp. 108-113
-
-
Di Giulio, M.1
-
8
-
-
35248857403
-
Efficient likelihood computations with nonreversible models of evolution
-
Bastien Boussau, Manolo Gouy: Efficient likelihood computations with nonreversible models of evolution. Syst. Biol. 55, 756-768 (2006)
-
(2006)
Syst. Biol.
, vol.55
, pp. 756-768
-
-
Boussau, B.1
Gouy, M.2
-
9
-
-
19144373707
-
Genomic studies of uncultivated archaea
-
DOI 10.1038/nrmicro1159
-
Christa Schleper, German Jurgens, Melanie Jonuscheit, Genomic studies of uncultivated Archaea. Nature Rev. Microb. 3, 479-488 (2005) (Pubitemid 40716174)
-
(2005)
Nature Reviews Microbiology
, vol.3
, Issue.6
, pp. 479-488
-
-
Schleper, C.1
Jurgens, G.2
Jonuscheit, M.3
-
10
-
-
33750951499
-
Global phylogeny determined by the combination of protein domains in proteomes
-
DOI 10.1093/molbev/msl117
-
Minglei Wang, Gustavo Caetano-Anollés, Global phylogeny determined by the combination of protein domains in proteomes. Mol. Biol. Evol. 23, 2444-2454 (2006) (Pubitemid 44737138)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.12
, pp. 2444-2454
-
-
Wang, M.1
Caetano-Anolles, G.2
-
11
-
-
34047215733
-
Refuting phylogenetic relationships
-
DOI 10.1186/1745-6150-1-26
-
James Bucknam, Yan Boucher, Eric Bapteste:. Refuting phylogenetic relationships. Biol. Direct 1, 26, doi:10.1186/1745-6150-1-26 (2006) (Pubitemid 46730974)
-
(2006)
Biology Direct
, vol.1
, pp. 26
-
-
Bucknam, J.1
Boucher, Y.2
Bapteste, E.3
-
12
-
-
25144485401
-
Nanoarchaea: Representatives of a novel archaeal phylum or a fastevolving euryarchaeal lineage related to Thermococcales?
-
doi:10.1186/gb-2005-6-5-r42
-
Celine Brochier, Simonetta Gribaldo, Yvan Zivanovic, Fabrice Gonfalonieri, Patrick Forterre: Nanoarchaea: representatives of a novel archaeal phylum or a fastevolving euryarchaeal lineage related to Thermococcales? Genome Biol. 6, R42 doi:10.1186/gb-2005-6-5-r42 (2005)
-
(2005)
Genome Biol.
, vol.6
-
-
Brochier, C.1
Gribaldo, S.2
Zivanovic, Y.3
Gonfalonieri, F.4
Forterre, P.5
-
14
-
-
4544235395
-
Archaeal phylogeny based on proteins of the transcription translation machineries: Tackling the Methanopyrus kandleri paradox
-
Céline Brochier, Patrick Forterre, Simonetta, Gribaldo: Archaeal phylogeny based on proteins of the transcription translation machineries: tackling the Methanopyrus kandleri paradox. Genome Biol. 5, R17 (2004)
-
(2004)
Genome Biol.
, vol.5
-
-
Brochier, C.1
Forterre, P.2
Simonetta, G.3
-
15
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
Julie D. Thompson, Toby J. Gibson, Frédéric Plewniak, François Jeanmougin, Desmond G. Higgins, The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882 (1997) (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
16
-
-
85118095265
-
1998. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4.0b10 (PPC)
-
Sinauer Associates, Sunderland MA. 17. Fredrik Ronquist, John P. Huelsenbeck, MrBayes 3: Bayesian phylogenetic inference under mixed models
-
David L. Swofford, 1998. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4.0b10 (PPC), Sinauer Associates, Sunderland MA. 17. Fredrik Ronquist, John P. Huelsenbeck, MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 9, 1572-4 (2003)
-
(2003)
Bioinformatics.
, vol.9
, pp. 1572-1574
-
-
Swofford, D.L.1
-
17
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
David Posada, Keith A. Crandall, Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817-818 (1998) (Pubitemid 28552116)
-
(1998)
Bioinformatics
, vol.14
, Issue.9
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
18
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
DOI 10.1080/10635150390235520
-
Stéphane Guindon, Olivier Gascuel, A simple, fast, and accurate algorithm to estimate large phylogenies by maximun likelihood. Syst. Biol. 52, 696-704 (2003) (Pubitemid 37365050)
-
(2003)
Systematic Biology
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
19
-
-
23144433822
-
PHYML Online - A web server for fast maximum likelihood-based phylogenetic inference
-
DOI 10.1093/nar/gki352
-
Stéphane Guindon, Franck Lethiec, Patrice Duroux, Olivier Gascuel, PHYML Online- a web server for fast maximum likelihood- based phylogenetic inference. Nucleic Acids Res. 33, W557-W559 (2005) (Pubitemid 44529983)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.WEB. SERV. ISS.
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
21
-
-
0036790028
-
Evolutionary distance estimation under heterogeneous sunstitution pattern among lineages
-
Koichiro Tamura, Sudhir Kumar, Evolutionary distance estimation under heterogeneous sunstitution pattern among lineages. Mol. Biol. Evol. 19, 1727-1736 (2002)
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1727-1736
-
-
Tamura, K.1
Kumar, S.2
-
22
-
-
3242810318
-
MEGA 3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Sudhir Kumar, Koichiro Tamura, Masatoshi Nei, MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform., 150-163 (2004)
-
(2004)
Brief. Bioinform.
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
23
-
-
0034818755
-
Taking variation of evolutionary rates between sites into account in inferring phylogenies
-
Joseph Felsenstein, Taking variation of evolutionary rates between sites into account in inferring phylogenies. J. Mol. Evol. 53, 447-555 (1996)
-
(1996)
J. Mol. Evol.
, vol.53
, pp. 447-555
-
-
Felsenstein, J.1
-
24
-
-
0037118037
-
A nonhyperthermophilic ancestor for Bacteria
-
Celine Brochier, Hervé Philippe: A nonhyperthermophilic ancestor for Bacteria. Nature 417, 244 (2002)
-
(2002)
Nature
, vol.417
, pp. 244
-
-
Brochier, C.1
Philippe, H.2
-
25
-
-
23044494638
-
An emerging phylogenetic core of Archaea: Phylogenies of transcription and translation machineries converge following addition of new genome sequences
-
DOI 10.1186/1471-2148-5-36
-
Céline Brochier, Patrick Forterre, Simonetta, Gribaldo: An emergenting phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences. BMC Evolut. Biol, 5, 36 doi:10.1186/1471-2148-5-36 (2005) (Pubitemid 41059679)
-
(2005)
BMC Evolutionary Biology
, vol.5
, pp. 36
-
-
Brochier, C.1
Forterre, P.2
Gribaldo, S.3
|