Quantitative profiling of proteins in complex mixtures using liquid chromatography and mass spectrometry

Journal of Proteome Research

Volumn 1, Issue 4, 2002, Pages 317-323

  Chelius, Dirk ^a   Bondarenko, Pavel V ^a  

^a Thermo Finnigan   (United States)

Author keywords

Mass spectrometry; Protein identification; Protein quantification

Indexed keywords

ALPHA 1 ANTITRYPSIN; APOLIPOPROTEIN A1; BINDING PROTEIN; CALCIUM BINDING PROTEIN; FIBRINOGEN; HAPTOGLOBIN; IMMUNOGLOBULIN; IMMUNOGLOBULIN G4; INITIATION FACTOR 3; MYOGLOBIN; OROSOMUCOID; PEPTIDE; PREALBUMIN; PROTEIN; SERINE; SERUM ALBUMIN; TRANSCRIPTION FACTOR; TRANSFERRIN; TRYPSIN; TRYPSIN INHIBITOR;

ANALYTIC METHOD; ARTICLE; BIOLOGY; COMPARATIVE STUDY; CORRELATION ANALYSIS; DIGESTION; EVALUATION; HUMAN; HYPOTHESIS; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN PROCESSING; QUANTITATIVE ANALYSIS; SAMPLE; SERUM;

AMINO ACID SEQUENCE; ANIMALS; CHROMATOGRAPHY; GENE EXPRESSION PROFILING; HUMANS; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; MYOGLOBIN; PEPTIDE FRAGMENTS; PROTEINS; STATISTICS;

EQUUS CABALLUS;

EID: 0036665581     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr025517j     Document Type: Article

References (21)

1. Link, A. J.; Eng, J.; Schieltz, D. M.; Carmack, E.; Mize, G. J.; Morris, D. R.; Garvik, B. M.; Yates, J. R., III. Nat. Biotechnol. 1999, 17, 676-82.
2. Shevchenko, A.; Jensen, O. N.; Podtelejnikov, A. V.; Sagliocco, F.; Wilm, M.; Vorm, O.; Mortensen, P.; Shevchenko, A.; Boucherie, H.; Mann, M. Proc. Natl. Acad. Sci. U.S.A 1996, 93, 14440-45.
3. Gygi, S. P.; Rochon, Y.; Franza, B. R.; Aebersold, R. Mol. Cell Biol. 1999, 19, 1720-30.
4. Garrels, J. I.; McLaughlin, C. S.; Warner, J. R.; Futcher, B.; Latter, G. I.; Kobayashi, R.; Schwender, B.; Volpe, T.; Anderson, D. S.; Mesquita-Fuentes, R.; Payne, W. E. Electrophoresis 1997, 18, 1347-60.
5. Boucherie, H.; Sagliocco, F.; Joubert, R.; Maillet, I.; Labarre, J.; Perrot, M. Electrophoresis 1996, 17, 1683-99.
6. King, R.; Bonfiglio, R.; Fernandez-Metzler, C.; Miller-Stein, C.; Olah, T. J. Am. Soc. Mass Spectrom. 2000, 11, 942-50.
7. Rafter, J. J.; Ingelman-Sundberg, M.; Gustafsson, J. A. Acta Biol. Med. Ger 1979, 38, 321-31.
8. Desiderio, D. M.; Kal, M. Biomed. Mass Spectrom. 1983, 10, 471-79.
9. Mirgorodskaya, O. A.; Kozmin, Y. P.; Titov, M. I.; Korner, R.; Sonksen, C. P.; Roepstorff, P. Rapid Commun. Mass Spectrom. 2000, 14, 1226-32.
10. Goodlett, D. R.; Keller, A.; Watts, J. D.; Newitt, R.; Yi, E. C.; Purvine, S.; Eng, J. K.; von Haller, P.; Aebersold, R.; Kolker, E. Rapid Commun. Mass Spectrom. 2001, 15, 1214-21.
11. Oda, Y.; Huang, K.; Cross, F. R.; Cowburn, D.; Chait, B. T. Proc. Natl. Acad. Sci. U.S.A 1999, 96, 6591-96.
12. Jensen, P. K.; Pasa-Tolic, L.; Peden, K. K.; Martinovic, S.; Lipton, M. S.; Anderson, G. A.; Tolic, N.; Wong, K. K.; Smith, R. D. Electrophoresis 2000, 21, 1372-80.
13. Conrads, T. P.; Alving, K.; Veenstra, T. D.; Belov, M. E.; Anderson, G. A.; Anderson, D. J.; Lipton, M. S.; Pasa-Tolic, L.; Udseth, H. R.; Chrisler, W. B.; Thrall, B. D.; Smith, R. D. Anal. Chem. 2001, 73, 2132-39.
14. Washburn, M. P.; Wolters, D.; Yates, J. R., III. Nat. Biotechnol. 2001, 19, 242-47.
15. Spahr, C. S.; Davis, M. T.; McGinley, M. D.; Robinson, J. H.; Bures, E. J.; Beierle, J.; Mort, J.; Courchesne, P. L.; Chen, K.; Wahl, R. C.; Yu, W.; Luethy, R.; Patterson, S. D. Proteomics 2001, 1, 93-107.
16. Davis, M. T.; Spahr, C. S.; McGinley, M. D.; Robinson, J. H.; Bures, E. J.; Beierle, J.; Mort, J.; Yu, W.; Luethy, R.; Patterson, S. D. Proteomics 2001, 1, 108-17.
17. Gygi, S. P.; Rist, B.; Gerber, S. A.; Turecek, F.; Gelb, M. H.; Aebersold, R. Nat. Biotechnol. 1999, 17, 994-99.
18. Smolka, M. B.; Zhou, H.; Purkayastha, S.; Aebersold, R. Anal. Biochem. 2001, 297, 25-31.
19. Griffin, T. J.; Gygi, S. P.; Rist, B.; Aebersold, R.; Loboda, A.; Jilkine, A.; Ens, W.; Standing, K. G. Anal. Chem. 2001, 73, 978-86.
20. Zhang, R.; Sioma, C. S.; Wang, S.; Regnier, F. E. Anal. Chem. 2001, 73, 5142-49.
21. Eng J. K.; McCormack A. L.; Yates J. R. I J. Am. Soc. Mass Spectrom. 1994, 5, 976-89.