Two macrophage colony-stimulating factor genes exist in fish that differ in gene organization and are differentially expressed

Journal of Immunology

Volumn 181, Issue 5, 2008, Pages 3310-3322

  Wang, Tiehui ^a   Hanington, Patrick C ^b   Belosevic, Miodrag ^b   Secombes, Christopher J ^a  

^a UNIVERSITY OF ABERDEEN   (United Kingdom)

^b UNIVERSITY OF ALBERTA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CXCR3; COLONY STIMULATING FACTOR 1; COMPLEMENTARY DNA; SIGNAL PEPTIDE;

ALTERNATIVE RNA SPLICING; ANIMAL CELL; ANIMAL EXPERIMENT; ARTICLE; CELL GROWTH; CELL MIGRATION; CONTROLLED STUDY; DOWN REGULATION; EXON; FISH; GENE; GENE EXPRESSION REGULATION; GENE INSERTION; GENETIC CODE; GENETIC ORGANIZATION; GENETIC VARIABILITY; GOLDFISH; IN VIVO STUDY; INFLAMMATION; INTRON; KIDNEY; LEUKOCYTE; MACROPHAGE; MOLECULE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; RAINBOW TROUT; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; SPLEEN; UPREGULATION; ZEBRA FISH; ANIMAL; GENE STRUCTURE; GENETICS; IMMUNE SYSTEM; IMMUNOLOGY; MOLECULAR GENETICS; PROTEIN TERTIARY STRUCTURE;

ALTERNATIVE SPLICING; ANIMALS; EXONS; FISHES; GENE COMPONENTS; GENE EXPRESSION REGULATION; GOLDFISH; IMMUNE SYSTEM; KIDNEY; LEUKOCYTES; MACROPHAGE COLONY-STIMULATING FACTOR; MACROPHAGES; MOLECULAR SEQUENCE DATA; ONCORHYNCHUS MYKISS; PROTEIN SORTING SIGNALS; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, CXCR3; SPLEEN; ZEBRAFISH;

EID: 51549106972     PISSN: 00221767     EISSN: 15506606     Source Type: Journal    
DOI: 10.4049/jimmunol.181.5.3310     Document Type: Article

References (56)

1. Hume, D. A., I. L. Ross, S. R. Himes, R. T. Sasmono, C. A. Wells, and T. Ravasi. 2002. The mononuclear phagocyte system revisited. J. Leukocyte Biol. 72: 621-627.
2. Yeung, Y. G., and E. R. Stanley. 2003. Proteomic approaches to the analysis of early events in colony-stimulating factor-1 signal transduction. Mol. Cell. Proteomics 2: 1143-1155.
3. Pixley, F. J., and E. R. Stanley. 2004. CSF-1 regulation of the wandering macrophage: complexity in action. Trends Cell Biol. 14: 628-638.
4. Chitu, V., and E. R. Stanley. 2006. Colony-stimulating factor-1 in immunity and inflammation. Curr. Opin. Immunol. 18: 39-48.
5. op) mice disrupts estrous cycles and ovulation. Biol. Reprod. 56: 110-118.
6. Rohrschneider, L. R., R. P. Bourette, M. N. Lioubin, P. A. Algate, G. M. Myles, and K. Carlberg. 1997. Growth and differentiation signals regulated by the MCSF receptor. Mol. Reprod. Dev. 46: 96-103.
7. Dai, X. M., G. R. Ryan, A. J. Hapel, M. G. Dominguez, R. G. Russell, S. Kapp, V. Sylvestre, and E. R. Stanley. 2002. Targeted disruption of the mouse colony-stimulating factor 1 receptor gene results in osteopetrosis, mononuclear phagocyte deficiency, increased primitive progenitor cell frequencies, and reproductive defects. Blood 99: 111-120.
8. Fixe, P., and V. Praloran. 1998. M-CSF: haematopoietic growth factor or inflammatory cytokine? Cytokine 10: 32-37. (Pubitemid 28068590)
9. Pandit, J., A. Bohm, J. Jancarik, R. Halenbeck, K. Koths, and S. H. Kim. 1992. Three-dimensional structure of dimeric human recombinant macrophage colony-stimulating factor. Science 258: 1358-1362. (Pubitemid 23007788)
10. Taylor, E. W., A. L. Fear, A. Bohm, S. H. Kim, and K. Koths. 1994. Structure-function studies on recombinant human macrophage colony-stimulating factor (M-CSF). J. Biol. Chem. 269: 31171-31177. (Pubitemid 24377614)
11. Glocker, M. O., B. Arbogast, J. Schreurs, and M. L. Deinzer. 1993. Assignment of the inter- and intramolecular disulfide linkages in recombinant human macrophage colony stimulating factor using fast atom bombardment mass spectrometry. Biochemistry 32: 482-488.
12. Zhang, Y. H., X. Yan, C. S. Maier, M. I. Schimerlik, and M. L. Deinzer. 2002. Conformational analysis of intermediates involved in the in vitro folding pathways of recombinant human macrophage colony stimulating factor β by sulfhydryl group trapping and hydrogen/deuterium pulsed labeling. Biochemistry 41: 15495-15504.
13. Falkenburg, J. H., M. A. Harrington, R. A. de Paus, W. K. Walsh, R. Daub, J. E. Landegent, and H. E. Broxmeyer. 1991. Differential transcriptional and posttranscriptional regulation of gene expression of the colony-stimulating factors by interleukin-1 and fetal bovine serum in murine fibroblasts. Blood 78: 658-665.
14. Furman, I., C. Baudet, and P. Brachet. 1996. Differential expression of M-CSF, LIF, and TNF-α genes in normal and malignant rat glial cells: regulation by lipopolysaccharide and vitamin D. J. Neurosci. Res. 46: 360-366. (Pubitemid 26376370)
15. Harrington, M., B. W. Konicek, X. L. Xia, and A. Song. 1997. Transcriptional regulation of the mouse CSF-1 gene. Mol. Reprod. Dev. 46: 39-44. (Pubitemid 27021352)
16. Liu, M. Y., and M. C. Wu. 1992. Induction of human monocyte cell line U937 differentiation and CSF-1 production by phorbol ester. Exp. Hematol. 20: 974-979.
17. Reisbach, G., J. Sindermann, J. P. Kremer, L. Hultner, H. Wolf, and P. Dormer. 1989. Macrophage colony-stimulating factor (CSF-1) is expressed by spontaneously outgrown EBV-B cell lines and activated normal B lymphocytes. Blood 74: 959-964. (Pubitemid 19210010)
18. Hallet, M. M., V. Praloran, H. Vie, M. A. Peyrat, G. Wong, J. Witek-Giannotti, J. P. Soulillou, and J. F. Moreau. 1991. Macrophage colony-stimulating factor (CSF-1) gene expression in human T-lymphocyte clones. Blood 77: 780-786.
19. Praloran, V., H. Gascan, S. Papin, S. Chevalier, M. Trossaert, and M. C. Boursier. 1990. Inducible production of macrophage colony-stimulating factor (CSF-1) by malignant and normal human T cells. Leukemia 4: 411-414. (Pubitemid 20204378)
20. Irvine, K. M., C. J. Burns, A. F. Wilks, S. Su, D. A. Hume, and M. J. Sweet. 2006. A CSF-1 receptor kinase inhibitor targets effector functions and inhibits proinflammatory cytokine production from murine macrophage populations. FASEB J. 20: 1921-1923.
21. Crowhurst, M. O., J. E. Layton, and G. J. Lieschke. 2002. Developmental biology of zebrafish myeloid cells. Int. J. Dev. Biol. 46: 483-492.
22. Belosevic, M., P. C. Hanington, and D. R. Barreda. 2006. Development of goldfish macrophages in vitro. Fish Shellfish Immunol. 20: 152-171.
23. Grabher, C., A. Cliffe, K. Miura, J. Hayflick, R. Pepperkok, P. Rorth, and J. Wittbrodt. 2007. Birth and life of tissue macrophages and their migration in embryogenesis and inflammation in medaka. J. Leukocyte Biol. 81: 263-271. (Pubitemid 46021276)
24. Barreda, D. R., P. C. Hanington, J. L. Stafford, and M. Belosevic. 2005. A novel soluble form of the CSF-1 receptor inhibits proliferation of self-renewing macrophages of goldfish (Carassius auratus L.). Dev. Comp. Immunol. 29: 879-894.
25. Honda, T., T. Nishizawa, M. Uenobe, C. Kohchi, A. Kuroda, M. Ototake, T. Nakanishi, Y. Yokomizo, Y. Takahashi, H. Inagawa, and G. Soma. 2005. Molecular cloning and expression analysis of a macrophage-colony stimulating factor receptor-like gene from rainbow trout, Oncorhynchus mykiss. Mol. Immunol. 42: 1-8. (Pubitemid 39360921)
26. Roca, F. J., M. A. Sepulcre, G. Lopez-Castejon, J. Meseguer, and V. Mulero. 2006. The colony-stimulating factor-1 receptor is a specific marker of macrophages from the bony fish gilthead seabream. Mol. Immunol. 43: 1418-1423.
27. Williams, H., S. Brenner, and B. Venkatesh. 2002. Identification and analysis of additional copies of the platelet-derived growth factor receptor and colony stimulating factor 1 receptor genes in fugu. Gene 295: 255-264. (Pubitemid 35279258)
28. Hanington, P. C., T. Wang, C. J. Secombes, and M. Belosevic. 2007. Growth factors of lower vertebrates: characterization of goldfish (Carassius auratus L.) macrophage colony stimulating factor-1. J. Biol. Chem. 282: 31865-31872.
29. Ganassin, R. C., and N. C. Bols. 1998. Development of a monocyte/macrophage-like cell line, RTS11, from rainbow trout spleen. Fish Shellfish Immunol. 8: 457-476. (Pubitemid 128179535)
30. Wolf, K., and M. C. Quimby. 1962. Established eurythermic lines of fish cells in vitro. Science 135: 1065-1066.
31. Lee, L. E., J. H. Clemons, D. G. Bechtel, S. J. Caldwell, K. B. Han, M. Pasitschniak-Arts, D. D. Mosser, and N. C. Bols. 1993. Development and characterization of a rainbow trout liver cell line expressing cytochrome P450-dependent monooxygenase activity. Cell Biol. Toxicol. 9: 279-294.
32. Wang, T., and C. J. Secombes. 2003. Complete sequencing and expression of three complement components, C1r, C4, and C1 inhibitor, of the classical activation pathway of the complement system in rainbow trout Oncorhynchus mykiss. Immunogenetics 55: 615-628. (Pubitemid 38085115)
33. Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
34. Gasteiger, E., C. Hoogland, A. Gattiker, S. Duvaud, M. R. Wilkins, R. D. Appel, and A. Bairoch. 2005. Protein identification and analysis tools on the ExPASy server. In The Proteomics Protocols Handbook. J. M. Walker, ed. Humana Press, Totowa, NJ, pp. 571-607.
35. Bendtsen, J. D., H. Nielsen, G. von Heijne, and S. Brunak. 2004. Improved prediction of signal peptides: SignalP 3.0. J. Mol. Biol. 340: 783-795.
36. Hofmann, K., and W. Stoffel. 1993. TMbase: a database of membrane spanning proteins segments. Biol. Chem. Hoppe-Seyler. 374: 166-166
37. Campanella, J. J., L. Bitincka, and J. Smalley. 2003. MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences. BMC Bioinformatics 4: 29-32.
38. Letunic, I., R. R. Copley, B. Pils, S. Pinkert, J. Schultz, and P. Bork. 2006. SMART 5: domains in the context of genomes and networks. Nucleic Acids Res. 34: D257-D260.
39. Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
40. Sinha, A. U., and J. Meller. 2007. Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms. BMC Bioinformatics 8: 82-90.
41. Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. (Pubitemid 47236692)
42. Wang, T., N. Johnson, J. Zou, N. Bols, and C. J. Secombes. 2004. Sequencing and expression of the second allele of the interleukin-1β1 gene in rainbow trout (Oncorhynchus mykiss): identification of a novel SINE in the third intron. Fish Shellfish Immunol. 16: 335-358. (Pubitemid 38377678)
43. Florea, L., G. Hartzell, Z. Zhang, G. M. Rubin, and W. Miller. 1998. A computer program for aligning a cDNA sequence with a genomic DNA sequence. Genome Res. 8: 967-974. (Pubitemid 28495448)
44. Wang, T., J. W. Holland, A. Carrington, J. Zou, and C. J. Secombes. 2007. Molecular and functional characterization of IL-15 in rainbow trout Oncorhynchus mykiss: a potent inducer of IFN-γ expression in spleen leukocytes. J. Immunol. 179: 1475-1488.
45. Wang, T., and C. J. Secombes. 2008. Rainbow trout suppressor of cytokine signalling (SOCS)-1, 2 and 3: molecular identification, expression, and modulation. Mol. Immunol. 45: 1449-1457. (Pubitemid 350299469)
46. Wang, T., J. W. Holland, N. Bols, and C. J. Secombes. 2005. Cloning and expression of the first nonmammalian interleukin-11 gene in rainbow trout Oncorhynchus mykiss. FEBS J. 272: 1136-1147. (Pubitemid 40314933)
47. Stafford, J. L., P. E. McLauchlan, C. J. Secombes, A. E. Ellis, and M. Belosevic. 2001. Generation of primary monocyte-like cultures from rainbow trout head kidney leukocytes. Dev. Comp. Immunol. 25: 447-459.
48. Neumann, N. F., D. Barreda, and M. Belosevic. 1998. Production of a macrophage growth factor(s) by a goldfish macrophage cell line and macrophages derived from goldfish kidney leukocytes. Dev. Comp. Immunol. 22: 417-432.
49. Jaillon, O., J. M. Aury, F. Brunet, J. L. Petit, N. Stange-Thomann, E. Mauceli, L. Bouneau, C. Fischer, C. Ozouf-Costaz, A. Bernot, et al. 2004. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431: 946-957.
50. Zou, J., P. S. Grabowski, C. Cunningham, and C. J. Secombes. 1999. Molecular cloning of interleukin 1β from rainbow trout Oncorhynchus mykiss reveals no evidence of an ice cut site. Cytokine 11: 552-560. (Pubitemid 29368972)
51. Bird, S., J. Zou, T. Wang, B. Munday, C. Cunningham, and C. J. Secombes. 2002. Evolution of interleukin-1β. Cytokine Growth Factor Rev. 13: 483-502.
52. Liu, L., M. K. Callahan, D. Huang, and R. M. Ransohoff. 2005. Chemokine receptor CXCR3: an unexpected enigma. Curr. Top. Dev. Biol. 68: 149-181.
53. Kwak, H. B., S. W. Lee, H. M. Jin, H. Ha, S. H. Lee, S. Takeshita, S. Tanaka, H. M. Kim, H. H. Kim, and Z. H. Lee. 2005. Monokine induced by interferon-γ is induced by receptor activator of nuclear factor κB ligand and is involved in osteoclast adhesion and migration. Blood 105: 2963-2969. (Pubitemid 40446293)
54. Chang, M. X., B. J. Sun, and P. Nie. 2007. The first nonmammalian CXCR3 in a teleost fish: gene and expression in blood cells and central nervous system in the grass carp (Ctenopharyngodon idella). Mol. Immunol. 44: 1123-1134.
55. Laing, K. J., N. Bols, and C. J. Secombes. 2002. A CXC chemokine sequence isolated from the rainbow trout Oncorhynchus mykiss resembles the closely related interferon-γ-inducible chemokines CXCL9, CXCL10 and CXCL11. Eur. Cytokine Network 13: 462-473.
56. Zou, J., A. Carrington, B. Collet, J. M. Dijkstra, Y. Yoshiura, N. Bols, and C. Secombes. 2005. Identification and bioactivities of IFN-γ in rainbow trout Oncorhynchus mykiss: the first Th1-type cytokine characterized functionally in fish. J. Immunol. 175: 2484-2494. (Pubitemid 41113859)