메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

Cinteny: Flexible analysis and visualization of synteny and genome rearrangements in multiple organisms

Author keywords

[No Author keywords available]

Indexed keywords

AGGREGATION STRATEGY; CHROMOSOMAL REARRANGEMENT; COMPARATIVE GENOMICS; EVOLUTIONARY DISTANCE; EVOLUTIONARY RELATIONSHIPS; FLEXIBLE PLATFORMS; GENOME REARRANGEMENTS; VISUALIZATION AND ANALYSIS;

EID: 33947408098     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-82     Document Type: Article
Times cited : (113)

References (19)
  • 1
    • 0000791476 scopus 로고
    • Lengths of chromosomal segments conserved since divergence of man and mouse
    • 344928 6583681 10.1073/pnas.81.3.814
    • Nadeau JH Taylor BA Lengths of chromosomal segments conserved since divergence of man and mouse Proc Nat Acad Sci 1984 81 814-818 344928 6583681 10.1073/pnas.81.3.814
    • (1984) Proc Nat Acad Sci , vol.81 , pp. 814-818
    • Nadeau, J.H.1    Taylor, B.A.2
  • 5
    • 1842768393 scopus 로고    scopus 로고
    • Reconstructing the genomic architecture of ancestral mammals: Lessons from human, mouse and rat genomes
    • 383294 15059991 10.1101/gr.1975204
    • Bourque G Pevzner PA Tesler G Reconstructing the genomic architecture of ancestral mammals: Lessons from human, mouse and rat genomes Genome Res 2004 14 507-516 383294 15059991 10.1101/gr.1975204
    • (2004) Genome Res , vol.14 , pp. 507-516
    • Bourque, G.1    Pevzner, P.A.2    Tesler, G.3
  • 6
    • 0033618555 scopus 로고    scopus 로고
    • Detecting protein function and protein-protein interactions from genome sequences
    • 10.1126/science.285.5428.751 10427000
    • Marcotte EM Pellegrini M Ng HL Rice DW Yeates TO Eisenberg D Detecting protein function and protein-protein interactions from genome sequences Science 1999 285 751-753 10.1126/science.285.5428.751 10427000
    • (1999) Science , vol.285 , pp. 751-753
    • Marcotte, E.M.1    Pellegrini, M.2    Ng, H.L.3    Rice, D.W.4    Yeates, T.O.5    Eisenberg, D.6
  • 7
    • 0037271322 scopus 로고    scopus 로고
    • Cross-species comparisons: A review of methods and available resources
    • 430969 12529301 10.1101/gr.222003
    • Frazer KA Elnitski L Church DM Dubchak I Hardison RC Cross-species comparisons: A review of methods and available resources Genome Res 2003 13 1-12 430969 12529301 10.1101/gr.222003
    • (2003) Genome Res , vol.13 , pp. 1-12
    • Frazer, K.A.1    Elnitski, L.2    Church, D.M.3    Dubchak, I.4    Hardison, R.C.5
  • 8
    • 0034767147 scopus 로고    scopus 로고
    • A linear-time algorithm for computing inversion distance between signed permutations with an experimental study
    • 10.1089/106652701753216503
    • Bader DA Moret BME Yan M A linear-time algorithm for computing inversion distance between signed permutations with an experimental study J of Comput Biol 2001 8 483-491 10.1089/106652701753216503
    • (2001) J of Comput Biol , vol.8 , pp. 483-491
    • Bader, D.A.1    Moret, B.M.E.2    Yan, M.3
  • 12
    • 0036211065 scopus 로고    scopus 로고
    • GRIMM: Genome rearrangements web server
    • 10.1093/bioinformatics/18.3.492 11934753
    • Tesler G GRIMM: Genome rearrangements web server Bioinformatics 2002 18 492-493 10.1093/bioinformatics/18.3.492 11934753
    • (2002) Bioinformatics , vol.18 , pp. 492-493
    • Tesler, G.1
  • 14
    • 33645766047 scopus 로고    scopus 로고
    • The Fragile breakage versus random breakage models of chromosome evolution
    • 1378107 16501665 10.1371/journal.pcbi.0020014
    • Peng Q Pevzner PA Tesler G The Fragile breakage versus random breakage models of chromosome evolution PLoS Computational Biology 2006 2 e14 1378107 16501665 10.1371/journal.pcbi.0020014
    • (2006) PLoS Computational Biology , vol.2
    • Peng, Q.1    Pevzner, P.A.2    Tesler, G.3
  • 16
    • 24144478551 scopus 로고    scopus 로고
    • SynBrowse: A synteny browser for comparative sequence analysis
    • 10.1093/bioinformatics/bti555 15994196
    • Pan X Stein L Brendel V SynBrowse: A synteny browser for comparative sequence analysis Bioinformatics 2005 21 3461-3468 10.1093/ bioinformatics/bti555 15994196
    • (2005) Bioinformatics , vol.21 , pp. 3461-3468
    • Pan, X.1    Stein, L.2    Brendel, V.3
  • 17
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes
    • 430971 12529302 10.1101/gr.757503
    • Pevzner PA Tesler G Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes Genome Res 2003 13 13-26 430971 12529302 10.1101/gr.757503
    • (2003) Genome Res , vol.13 , pp. 13-26
    • Pevzner, P.A.1    Tesler, G.2
  • 18
    • 2642518685 scopus 로고    scopus 로고
    • Detailed comparative mapping and gene order analysis of the canine ctvm locus and syntenic regions in human, mouse, and rat genomes
    • 10.1016/j.ygeno.2003.12.009 15177558
    • Andelfinger G Hitte C Guyon R Galibert F Tesler G Bourque G Pevzner PA Kirkness E Etter L Benson DW Detailed comparative mapping and gene order analysis of the canine ctvm locus and syntenic regions in human, mouse, and rat genomes Genomics 2004 83 1053-1062 10.1016/j.ygeno.2003.12.009 15177558
    • (2004) Genomics , vol.83 , pp. 1053-1062
    • Andelfinger, G.1    Hitte, C.2    Guyon, R.3    Galibert, F.4    Tesler, G.5    Bourque, G.6    Pevzner, P.A.7    Kirkness, E.8    Etter, L.9    Benson, D.W.10
  • 19
    • 33747817416 scopus 로고    scopus 로고
    • Roundup: A multi-genome repository of orthologs and evolutionary distances
    • 10.1093/bioinformatics/btl286 16777906
    • Deluca TF Wu IH Pu J Monaghan T Peshkin L Singh S Wall DP Roundup: A multi-genome repository of orthologs and evolutionary distances Bioinformatics 2006 22 2044-2046 10.1093/bioinformatics/btl286 16777906
    • (2006) Bioinformatics , vol.22 , pp. 2044-2046
    • Deluca, T.F.1    Wu, I.H.2    Pu, J.3    Monaghan, T.4    Peshkin, L.5    Singh, S.6    Wall, D.P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.