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Volumn 34, Issue WEB. SERV. ISS., 2006, Pages

Arabidopsis Co-expression Tool (ACT): Web server tools for microarray-based gene expression analysis

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; CORRELATION COEFFICIENT; DATA BASE; GENE CLUSTER; GENE EXPRESSION; GENE FUNCTION; GENE IDENTIFICATION; MICROARRAY ANALYSIS; PRIORITY JOURNAL; ALGORITHM; CIRCADIAN RHYTHM; COMPUTER INTERFACE; DNA MICROARRAY; GENE; GENE EXPRESSION PROFILING; GENETICS; INTERNET; METABOLISM; METHODOLOGY;

EID: 33747814803     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkl204     Document Type: Article
Times cited : (128)

References (21)
  • 1
    • 0347968038 scopus 로고    scopus 로고
    • NASCArrays: A repository for microarray data generated by NASC's transcriptomics service
    • Craigon,D.J., James,N., Okyere,J., Higgins,J., Jotham,J. and May,S. (2004) NASCArrays: a repository for microarray data generated by NASC's transcriptomics service. Nucleic Acids Res., 32, D575-D577.
    • (2004) Nucleic Acids Res. , vol.32
    • Craigon, D.J.1    James, N.2    Okyere, J.3    Higgins, J.4    Jotham, J.5    May, S.6
  • 2
    • 0037249498 scopus 로고    scopus 로고
    • The Arabidopsis Information Resource (TAIR): A model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community
    • Rhee,S.Y., Beavis,W., Berardini,T.Z., Chen,G.H., Dixon,D., Doyle,A., Garcia-Hernandez,M., Huala,E., Lander,G., Montoya,M. et al. (2003) The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community. Nucleic Acids Res., 31, 224-228.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 224-228
    • Rhee, S.Y.1    Beavis, W.2    Berardini, T.Z.3    Chen, G.H.4    Dixon, D.5    Doyle, A.6    Garcia-Hernandez, M.7    Huala, E.8    Lander, G.9    Montoya, M.10
  • 4
    • 22044437388 scopus 로고    scopus 로고
    • The Botany Array Resource: E-Northerns, Expression Angling, and Promoter analyses
    • Toufighi,K., Brady,S.M., Austin,R., Ly,E. and Provart,N.J. (2005) The Botany Array Resource: e-Northerns, Expression Angling, and Promoter analyses. Plant J., 43, 153-163.
    • (2005) Plant J. , vol.43 , pp. 153-163
    • Toufighi, K.1    Brady, S.M.2    Austin, R.3    Ly, E.4    Provart, N.J.5
  • 5
    • 27244438560 scopus 로고    scopus 로고
    • Gene-expression analysis and network discovery using Genevestigator
    • Zimmermann,P., Hennig,L. and Gruissem,W. (2005) Gene-expression analysis and network discovery using Genevestigator. Trends Plant Sci., 10, 407-409.
    • (2005) Trends Plant Sci. , vol.10 , pp. 407-409
    • Zimmermann, P.1    Hennig, L.2    Gruissem, W.3
  • 7
    • 55449107813 scopus 로고    scopus 로고
    • Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family
    • Rautengarten,C., Steinhauser,D., Bussis,D., Stintzi,A., Schaller,A., Kopka,J. and Altmann,T. (2005) Inferring hypotheses on functional relationships of genes: analysis of the Arabidopsis thaliana subtilase gene family. PLoS Comput. Biol., 1, 297-312.
    • (2005) PLoS Comput. Biol. , vol.1 , pp. 297-312
    • Rautengarten, C.1    Steinhauser, D.2    Bussis, D.3    Stintzi, A.4    Schaller, A.5    Kopka, J.6    Altmann, T.7
  • 8
    • 18744415447 scopus 로고    scopus 로고
    • Identification of brassinosteroid-related genes by means of transcript co-response analyses
    • Lisso,J., Steinhauser,D., Altmann,T., Kopka,J. and Mussig,C. (2005) Identification of brassinosteroid-related genes by means of transcript co-response analyses. Nucleic Acids Res., 33, 2685-2696.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 2685-2696
    • Lisso, J.1    Steinhauser, D.2    Altmann, T.3    Kopka, J.4    Mussig, C.5
  • 9
    • 20844445318 scopus 로고    scopus 로고
    • Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets
    • Persson,S., Wei,H.R., Milne,J., Page,G.P. and Somerville,C.R. (2005) Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. Proc. Natl Acad. Sci. USA, 102, 8633-8638.
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 8633-8638
    • Persson, S.1    Wei, H.R.2    Milne, J.3    Page, G.P.4    Somerville, C.R.5
  • 10
    • 0042024906 scopus 로고    scopus 로고
    • A gene recommender algorithm to identify coexpressed genes in C.elegans
    • Owen,A.B., Stuart,J., Mach,K., Villeneuve,A.M. and Kim,S. (2003) A gene recommender algorithm to identify coexpressed genes in C.elegans. Genome Res., 13, 1828-1837.
    • (2003) Genome Res. , vol.13 , pp. 1828-1837
    • Owen, A.B.1    Stuart, J.2    Mach, K.3    Villeneuve, A.M.4    Kim, S.5
  • 13
    • 84976668743 scopus 로고
    • Algorithm 457: Finding all cliques of an undirected graph
    • Bron,C. and Kerbosch,J. (1973) Algorithm 457: finding all cliques of an undirected graph. Commun. ACM, 16, 575-577.
    • (1973) Commun. ACM , vol.16 , pp. 575-577
    • Bron, C.1    Kerbosch, J.2
  • 16
    • 0035983764 scopus 로고    scopus 로고
    • MYB transcription factors in the Arabidopsis circadian clock
    • Carré,I.A. and Kim,J.Y. (2002) MYB transcription factors in the Arabidopsis circadian clock. J. Exp. Bot., 53, 1551-1557.
    • (2002) J. Exp. Bot. , vol.53 , pp. 1551-1557
    • Carré, I.A.1    Kim, J.Y.2
  • 17
    • 28644449917 scopus 로고    scopus 로고
    • How does gene expression clustering work?
    • D'haeseleer,P. (2005) How does gene expression clustering work? Nat. Biotechnol., 23, 1499-1501.
    • (2005) Nat. Biotechnol. , vol.23 , pp. 1499-1501
    • D'haeseleer, P.1
  • 20
    • 0036108622 scopus 로고    scopus 로고
    • A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes
    • Thijs,G., Marchal,K., Lescot,M., Rombauts,S., De Moor,B., Rouzé,P. and Moreau,Y. (2002) A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes. J. Comput. Biol., 9, 447-464.
    • (2002) J. Comput. Biol. , vol.9 , pp. 447-464
    • Thijs, G.1    Marchal, K.2    Lescot, M.3    Rombauts, S.4    De Moor, B.5    Rouzé, P.6    Moreau, Y.7
  • 21
    • 14844307659 scopus 로고    scopus 로고
    • Modelling gene networks at different organisational levels
    • Schlitt,T. and Brazma,A. (2005) Modelling gene networks at different organisational levels. FEBS Lett., 579, 1859-1866.
    • (2005) FEBS Lett. , vol.579 , pp. 1859-1866
    • Schlitt, T.1    Brazma, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.