메뉴 건너뛰기




Volumn 3, Issue , 2007, Pages 231-243

Statistical issues and analyses of in vivo and in vitro genomic data in order to identify clinically relevant profiles

Author keywords

Functional genomics; In vitro; In vivo; Null hypothesis

Indexed keywords

ARTICLE; CANCER GENETICS; FUNCTIONAL GENOMICS; GENE EXPRESSION; HUMAN; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; PROTEIN EXPRESSION; STATISTICAL ANALYSIS; ATTENTION; CANCER MODEL; CARCINOGENESIS; HUMAN TISSUE; NULL HYPOTHESIS;

EID: 49649091057     PISSN: 11769351     EISSN: 11769351     Source Type: Journal    
DOI: 10.1177/117693510700300008     Document Type: Article
Times cited : (1)

References (21)
  • 1
    • 18544365698 scopus 로고    scopus 로고
    • Gene-expression profiles predict survival of patients with lung adenocarcinoma
    • Beer, D.G., Kardia, S.L.R., Huang, C-C. et al. 2002. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nature Medicine, 8:816-824.
    • (2002) Nature Medicine , vol.8 , pp. 816-824
    • Beer, D.G.1    Kardia, S.L.R.2    Huang, C.-C.3
  • 2
    • 19344363035 scopus 로고    scopus 로고
    • Gene expression signature of fibroblast serum response predicts human cancer progression: Similarities between tumors and wounds
    • Chang, H.Y., Sneddon, J.B., Alizadeh, A.A. et al. 2004. Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds. PLoS Biology, 2:E7.
    • (2004) PLoS Biology , vol.2
    • Chang, H.Y.1    Sneddon, J.B.2    Alizadeh, A.A.3
  • 3
    • 0037251963 scopus 로고    scopus 로고
    • SOURCE: A unified genomic resource of functional annotations, ontologies, and gene expression data
    • Diehn, M., Sherlock, G., Binkley, G. et al. 2003. SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data. Nucleic Acids Research, 31:219-23.
    • (2003) Nucleic Acids Research , vol.31 , pp. 219-223
    • Diehn, M.1    Sherlock, G.2    Binkley, G.3
  • 4
    • 13444282534 scopus 로고    scopus 로고
    • Outcome signature genes in breast cancer: Is there a unique set?
    • Ein-Dor, L., Kela, I., Getz, G. et al. 2005. Outcome signature genes in breast cancer: is there a unique set? Bioinformatics, 21:171-8.
    • (2005) Bioinformatics , vol.21 , pp. 171-178
    • Ein-Dor, L.1    Kela, I.2    Getz, G.3
  • 5
    • 33746910265 scopus 로고    scopus 로고
    • Concordance among gene-expression-based predictors for breast cancer
    • Fan, C., Oh, D.S., Wessels, L. et al. 2006. Concordance among gene-expression-based predictors for breast cancer. New England Journal of Medicine, 355:560-9.
    • (2006) New England Journal of Medicine , vol.355 , pp. 560-569
    • Fan, C.1    Oh, D.S.2    Wessels, L.3
  • 8
    • 0037941536 scopus 로고    scopus 로고
    • Gene expression phenotypic models that predict the activity of oncogenic pathways
    • Huang, E., Ishida, S., Pittman, J. et al. 2003. Gene expression phenotypic models that predict the activity of oncogenic pathways. Nature Genetics, 34:226-230.
    • (2003) Nature Genetics , vol.34 , pp. 226-230
    • Huang, E.1    Ishida, S.2    Pittman, J.3
  • 9
    • 0042354669 scopus 로고    scopus 로고
    • A mechanism of cyclin D1 action encoded in the patterns of gene expression in human cancer
    • Lamb, J., Ramaswamy, S., Ford, H.L. et al. 2003. A mechanism of cyclin D1 action encoded in the patterns of gene expression in human cancer. Cell, 114:323-334.
    • (2003) Cell , vol.114 , pp. 323-334
    • Lamb, J.1    Ramaswamy, S.2    Ford, H.L.3
  • 10
    • 0000072057 scopus 로고    scopus 로고
    • Variance component testing in generalised linear models with random effects
    • Lin, X. 1997. Variance component testing in generalised linear models with random effects. Biometrika, 84:309-326.
    • (1997) Biometrika , vol.84 , pp. 309-326
    • Lin, X.1
  • 11
    • 0038054341 scopus 로고    scopus 로고
    • PGC-1 alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
    • Mootha, V.K., Lindgren, C.M., Eriksson, K.F. et al. 2003. PGC-1 alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nature Genetics, 34:267-73.
    • (2003) Nature Genetics , vol.34 , pp. 267-273
    • Mootha, V.K.1    Lindgren, C.M.2    Eriksson, K.F.3
  • 12
    • 1842539516 scopus 로고    scopus 로고
    • A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other
    • Nyholt, D.R. 2004. A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other. American Journal of Human Genetics, 74:765-769.
    • (2004) American Journal of Human Genetics , vol.74 , pp. 765-769
    • Nyholt, D.R.1
  • 13
    • 1942438016 scopus 로고    scopus 로고
    • Rules of evidence for cancer molecular-marker discovery and validation
    • Ransohoff, DF. 2004. Rules of evidence for cancer molecular-marker discovery and validation. Nature Reviews Cancer, 4:309-314.
    • (2004) Nature Reviews Cancer , vol.4 , pp. 309-314
    • Ransohoff, D.F.1
  • 15
    • 49649124535 scopus 로고    scopus 로고
    • Confidence levels for the comparison of microarray experiments
    • 3:Article32. Epub Nov 23
    • Shedden, K. 2004. Confidence levels for the comparison of microarray experiments. Stat. Appl. Genetics and Molecular Biology, 3:Article32. Epub 2004 Nov 23.
    • (2004) Stat. Appl. Genetics and Molecular Biology
    • Shedden, K.1
  • 17
    • 11244258643 scopus 로고    scopus 로고
    • An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis
    • Sweet-Cordero, A., Mukherjee, S., Subramanian, A. et al. 2005. An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis. Nature Genetics, 37:48-55.
    • (2005) Nature Genetics , vol.37 , pp. 48-55
    • Sweet-Cordero, A.1    Mukherjee, S.2    Subramanian, A.3
  • 18
    • 0034960264 scopus 로고    scopus 로고
    • Missing value estimation methods for DNA microarrays
    • Troyanskaya, O., Cantor, M., Sherlock, G. et al. 2001. Missing value estimation methods for DNA microarrays. Bioinformatics, 17:520-525.
    • (2001) Bioinformatics , vol.17 , pp. 520-525
    • Troyanskaya, O.1    Cantor, M.2    Sherlock, G.3
  • 19
    • 18244409687 scopus 로고    scopus 로고
    • van't Veer, L.J., Dai, H., van de, Vijver, M.J. et al. 2002. Gene expression profiling prdicts clinical outcome of breast cancer. Nature, 415:530-536.
    • van't Veer, L.J., Dai, H., van de, Vijver, M.J. et al. 2002. Gene expression profiling prdicts clinical outcome of breast cancer. Nature, 415:530-536.
  • 20
    • 27644506613 scopus 로고    scopus 로고
    • Integrative genomic and proteomic analysis of prostate cancer reveals signatures of metastatic progression
    • Varambally, S., Yu, J., Laxman, B. et al. 2005. Integrative genomic and proteomic analysis of prostate cancer reveals signatures of metastatic progression. Cancer Cell, 8:393-406.
    • (2005) Cancer Cell , vol.8 , pp. 393-406
    • Varambally, S.1    Yu, J.2    Laxman, B.3
  • 21
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang, Y.H., Dudoit, S., Luu, P. et al. 2002. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Research, 30:E15.
    • (2002) Nucleic Acids Research , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.