Molecular cloning and expression of a cold-adapted lipase gene from an antarctic deep sea psychrotrophic bacterium Pseudomonas sp. 7323

Marine Biotechnology

Volumn 10, Issue 5, 2008, Pages 612-621

  Zhang, Jin Wei ^a,b,c   Zeng, Run Ying ^b,c  

^a XIAMEN UNIVERSITY   (China)

^b Chongqing Institute of Geology and Mineral Resources   (China)

^c Key Laboratory of Marine Genetic Resources of Fujian Province   (China)

Author keywords

Characterization; Cold adapted lipase; Deep sea sediment; Sequencing and expression

Indexed keywords

AMINO ACID RESIDUES; CHARACTERIZATION; COLD-ADAPTED LIPASE; DEEP SEA; DEEP SEA SEDIMENT; LIPASE GENE; MOLECULAR CLONING; NUCLEOTIDE SEQUENCING; OPTIMAL TEMPERATURES; P H VALUES; PHYSICO-CHEMICAL PROPERTIES; PSEUDOMONAS SP.; PSEUDOMONAS STRAIN; SEQUENCING AND EXPRESSION; WILD-TYPE;

AMINES; AMINO ACIDS; CALCIUM; CATALYSTS; CHROMATOGRAPHIC ANALYSIS; CLONING; ELECTROPHORETIC MOBILITY; ENZYMES; ESCHERICHIA COLI; GENE ENCODING; GENETIC ENGINEERING; METAL REFINING; METALS; NUCLEIC ACIDS; ORGANIC ACIDS; PROTEINS; PURIFICATION; SEDIMENTATION;

LIPASES;

BACTERIAL PROTEIN; DETERGENT; LIPA PROTEIN, BACTERIA; RNA 16S;

AMINO ACID; BACTERIUM; CLONE; ENZYME ACTIVITY; GENE EXPRESSION; MOLECULAR ANALYSIS;

AMINO ACID SEQUENCE; ANTARCTICA; ARTICLE; CHEMISTRY; CLASSIFICATION; COLD; ENZYME SPECIFICITY; ENZYMOLOGY; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PSEUDOMONAS; SEA; SEQUENCE ALIGNMENT; TEMPERATURE;

AMINO ACID SEQUENCE; ANTARCTIC REGIONS; BACTERIAL PROTEINS; CLONING, MOLECULAR; COLD TEMPERATURE; DETERGENTS; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; OCEANS AND SEAS; PHYLOGENY; PSEUDOMONAS; RNA, RIBOSOMAL, 16S; SEQUENCE ALIGNMENT; SUBSTRATE SPECIFICITY; TEMPERATURE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PSEUDOMONAS; PSEUDOMONAS SP. 7323;

EID: 49349093802     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-008-9099-4     Document Type: Article

References (32)

1. JH Ahn JG Pan JS Rhee 1999 Identification of the tliDEF ABC transporter specific for lipase in Pseudomonas fluorescens SIK W1 J Bacteriol 181 1847 1852
2. H Akatsuka E Kawai K Omori S Komatsubara T Shibatani T Tosa 1994 The lipA gene of Serratia marcescens which encodes an extracellular lipase having no N-terminal signal peptide J Bacteriol 176 1949 1956
3. H Akatsuka E Kawai K Omori T Shibatani 1995 The three genes lipB, lipC, and lipD involved in the extracellular secretion of the Serratia marcescens lipase which lacks an N-terminal signal peptide J Bacteriol 177 6381 6389
4. C Alquati L De Gioia G Santarossa L Alberghina P Fantucci M Lotti 2002 The cold-active lipase of Pseudomonas fragi. Heterologous expression, biochemical characterization and molecular modeling Eur J Biochem 269 3321 3328
5. K Amada M Haruki T Imanaka M Morikawa S Kanaya 2000 Overproduction in Escherichia coli, purification and characterization of a family I.3 lipase from Pseudomonas sp. MIS38 Biochim Biophys Acta 1478 201 210
6. JL Arpigny KE Jaeger 1999 Bacterial lipolytic enzymes: classification and properties Biochem J 343 177 183
7. JL Arpigny G Feller C Gerday 1995 Corrigendum to "Cloning, sequence and structural features of a lipase from the Antarctic facultative psychrophile Psychrobacter immobilis B10" [Biochim. Biophys. Acta 1171 (1993) 331-333] Biochim Biophys Acta 1263 103
8. MM Bradford 1976 A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Anal Biochem 72 248 254
9. Brockerhoff H, Jensen RG (1974) Lipolytic enzymes. Academic, New York
10. DW Choo T Kurihara T Suzuki K Soda N Esaki 1998 A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization Appl Environ Microbiol 64 486 491
11. A Clarke R Leakey 1996 The seasonal cycle of phytoplankton, macronutrients and the microbial community in a near shore Antarctic marine ecosystem Limnol Oceanogr 41 1281 1294
12. MS Clark A Clarke CS Cockell P Convey HW Dietrich III KPP Fraser IA Johnston BA Methe AE Murray LS Peck K Roemisch AD Rogers 2004 Antarctic genomics Compar Funct Genom 5 230 238
13. G Feller C Gerday 2003 Psychrophilic enzymes: hot topics in cold adaptation Nat Rev Microbiol 1 200 208
14. G Feller M Thiry JL Arpigny C Gerday 1991 Cloning and expression in Escherichia coli of three lipase-encoding genes from the psychrotrophic Antarctic strain Moraxella TA144 Gene 102 111 115
15. G Feller E Narinx JL Arpigny SJ Zekhnini C Gerday 1994 Temperature dependence of growth, enzyme secretion and activity of psychrophilic Antarctic bacteria Appl Microbiol Biotechnol 41 477 479
16. G Feller E Narinx JL Arpigny M Aittaleb E Baise S Genicot C Gerday 1996 Enzymes from psychrophilic organisms FEMS Microbiol Rev 18 189 202
17. C Gerday M Aittaleb M Bentahir JP Chessa P Claverie T Collins S D'amico J Dumont G Garsoux D Georlette A Hoyoux T Lonhienne MA Meuwis G Feller 2000 Cold-adapted enzymes: from fundamentals to biotechnology Trends Biotechnol 18 103 107
18. E Kawai A Idei H Kumura K Shimazaki 1999 The ABC-exporter genes involved in the lipase secretion are clustered with the genes for lipase, alkaline protease, and serine protease homologues in Pseudomonas fluorescens no. 33 Biochim Biophys Acta 1446 377 382
19. Y Kojima M Kobayashi S Shimizu 2003 A novel lipase from Pseudomonas fluorescens HU380: gene cloning, overproduction, renaturation-activation, two-step purification, and characterization J Biosci Bioeng 96 242 249
20. UK Laemmli 1970 Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 680 685
21. YP Lee GH Chung JS Rhee 1993 Purification and characterization of Pseudomonas fluorescens SIK W1 lipase expressed in Escherichia coli Biochim Biophys Acta 1169 156 169
22. X Li S Tetling UK Winkler KE Jaeger MJ Benedik 1995 Gene cloning, sequence analysis, purification, and secretion by Escherichia coli of an extracellular lipase from Serratia marcescens Appl Environ Microbiol 61 2674 2680
23. HO Pörtner 2002 Climate variations and the physiological basis of temperature dependent biogeography: systematic to molecular hierarchy of thermal tolerance in animals Comp Biochem Physiol A 132 739 761
24. Palleroni NJ (2005) Genus I. Pseudomonas. In: Brenner DJ, Krieg NR, Staley JT, Garrity GM (eds) Bergey's manual of systematic bacteriology, vol. 2, 2nd edn. Springer, New York, pp 323-379
25. LS Peck 2002 Ecophysiology of Antarctic marine ectotherms: limits to life Polar Biol 25 31 40
26. N Rashid Y Shimada S Ezaki H Atomi T Imanaka 2001 Low-temperature lipase from psychrotrophic Pseudomonas sp. strain KB700A Appl Environ Microbiol 67 4064 4069
27. GPC Salmond PJ Reeves 1993 Membrane traffic wardens and protein secretion in Gram-negative bacteria Trends Biochem Sci 18 7 12
28. T Suzuki T Nakayama T Kurihara T Nishino N Esaki 2001 Cold-active lipolytic activity of psychrotrophic Acinetobacter sp. strain No. 6 J Biosci Bioeng 92 144 148
29. C Verde MC De Rosa D Giordano D Mosca D De Pascale L Raiola E Cocca V Carratore B Giardina G Di Prisco 2005 Structure, function and molecular adaptations of haemoglobins of the polar cartilaginous fish Bathyraja eatonii and Raja hyperborea Biochem J 389 297 306
30. MR Yen CR Peabody SM Partovi Y Zhai YH Tseng MH Saier 2002 Protein-translocating outer membrane porins of Gram-negative bacteria Biochim Biophys Acta 1562 6 31
31. JW Zhang RY Zeng 2007 Psychrotrophic amylolytic bacteria from deep sea sediment of Prydz Bay, Antarctic: diversity and characterization of amylases World J Microbiol Biotechnol 23 1551 1557
32. JW Zhang S Lin RY Zeng 2007 Cloning, expression, and characterization of a cold-adapted lipase gene from an Antarctic deep-sea psychrotrophic bacterium, Psychrobacter sp. 7195 J Microbiol Biotechnol 17 604 610