-
1
-
-
29144480020
-
ANOSVA: A statistical method for detecting splice variation from expression data
-
M. S. Cline, J. Blume, S. Cawley, T. A. Clark, J. S. Hu, G. Lu, N. Salomonis, H. Wang, and A. Williams, "ANOSVA: A statistical method for detecting splice variation from expression data", in Bioinformatics, 2005, vol. 21, pp. i107-i115.
-
(2005)
Bioinformatics
, vol.21
-
-
Cline, M.S.1
Blume, J.2
Cawley, S.3
Clark, T.A.4
Hu, J.S.5
Lu, G.6
Salomonis, N.7
Wang, H.8
Williams, A.9
-
2
-
-
16544378889
-
Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data
-
K. Le, K. Mitsouras, M. Roy, Q. Wang, Q. Xu, S. F. Nelson, and C. Lee, "Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data", in Nucleic Acids Res., 2004, vol. 32, e180.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Le, K.1
Mitsouras, K.2
Roy, M.3
Wang, Q.4
Xu, Q.5
Nelson, S.F.6
Lee, C.7
-
3
-
-
55449110096
-
Analysis of a splice array experiment elucidates roles of chromatin elongation factor spt4-5 in splicing
-
Y. Xiao, Y. H. Yang, T. A. Burckin, L. Shiue, G. A. Hartzog, and M. R. Segal, "Analysis of a splice array experiment elucidates roles of chromatin elongation factor spt4-5 in splicing", in PLOS Comput. Biol., 2005, vol. 1, e39.
-
(2005)
PLOS Comput. Biol
, vol.1
-
-
Xiao, Y.1
Yang, Y.H.2
Burckin, T.A.3
Shiue, L.4
Hartzog, G.A.5
Segal, M.R.6
-
4
-
-
0242700119
-
Gene structure-based splice variant deconvolution using a microarray platform
-
H. Wang, E. Hubbell, J. S. Hu, G. Mei, M. Cline, G. Lu, T. Clark, M. A. Siani-Rose, M. Ares, D. C. Kulp, and D. Haussler, "Gene structure-based splice variant deconvolution using a microarray platform", in Bioinformatics, 2005, vol. 19, pp. i315-i322.
-
(2005)
Bioinformatics
, vol.19
-
-
Wang, H.1
Hubbell, E.2
Hu, J.S.3
Mei, G.4
Cline, M.5
Lu, G.6
Clark, T.7
Siani-Rose, M.A.8
Ares, M.9
Kulp, D.C.10
Haussler, D.11
-
5
-
-
33846467191
-
Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array
-
P. J. Gardina, T. A. Clark, B. Shimada, M. K. Staples, Q. Yang, J. Veitch, A. Schweitzer, T. Awad, C. Sugnet, S. Dee, C. Davies, A. Williams, and Y. Turpaz, "Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array", in BMC Genomics, 2006, vol. 7, no. 325.
-
(2006)
BMC Genomics
, vol.7
, Issue.325
-
-
Gardina, P.J.1
Clark, T.A.2
Shimada, B.3
Staples, M.K.4
Yang, Q.5
Veitch, J.6
Schweitzer, A.7
Awad, T.8
Sugnet, C.9
Dee, S.10
Davies, C.11
Williams, A.12
Turpaz, Y.13
-
6
-
-
34447517678
-
A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST arrays
-
R. Yoshida, K. Numata, S. Imoto, M. Nagasaki, A. Doi, K. Ueno, and S. Miyano. "A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST arrays", Genome Informatics, 2006, vol. 17, no. 1, pp. 88-99.
-
(2006)
Genome Informatics
, vol.17
, Issue.1
, pp. 88-99
-
-
Yoshida, R.1
Numata, K.2
Imoto, S.3
Nagasaki, M.4
Doi, A.5
Ueno, K.6
Miyano, S.7
-
7
-
-
0035328527
-
Accelerated age-related CpG island methylation in ulcerative colitis
-
J. P. Issa, N. Ahuja, M. Toyota, M. P. Bronner, and T. A. Brentnall, "Accelerated age-related CpG island methylation in ulcerative colitis", in Cancer Res., 2001, vol. 61, pp. 3573-3577.
-
(2001)
Cancer Res
, vol.61
, pp. 3573-3577
-
-
Issa, J.P.1
Ahuja, N.2
Toyota, M.3
Bronner, M.P.4
Brentnall, T.A.5
-
8
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Y. Benjamini and Y. Hochberg, "Controlling the false discovery rate: a practical and powerful approach to multiple testing", in J. Royal Stat. Soc. B, 1995, vol. 57, pp. 289-300.
-
(1995)
J. Royal Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
9
-
-
0036020892
-
A direct approach to false discovery rates
-
J. D. Storey, "A direct approach to false discovery rates", in J. Royal Stat. Soc. B, 2002, vol. 64, pp. 479-498.
-
(2002)
J. Royal Stat. Soc. B
, vol.64
, pp. 479-498
-
-
Storey, J.D.1
-
10
-
-
2942520998
-
Time- and dose-dependent effects of curcumin on gene expression in human colon cancer cells
-
M. J. Van Erk, E. Teuling, Y. C. Staal, S. Huybers, P. J. Van Bladeren, J. M. Aarts, and B. Van Ommen, "Time- and dose-dependent effects of curcumin on gene expression in human colon cancer cells", in J. Carcinog., 2004, vol. 3, no. 8.
-
(2004)
J. Carcinog
, vol.3
, Issue.8
-
-
Van Erk, M.J.1
Teuling, E.2
Staal, Y.C.3
Huybers, S.4
Van Bladeren, P.J.5
Aarts, J.M.6
Van Ommen, B.7
-
11
-
-
0038605227
-
Folate, DNA methylation and colorectal cancer
-
Soc
-
M. Pufulete, P. W. Emery, and T. A. B. Sanders, "Folate, DNA methylation and colorectal cancer", in Proc. Nutr. Soc., 2003, vol. 62, pp. 437-445.
-
(2003)
Proc. Nutr
, vol.62
, pp. 437-445
-
-
Pufulete, M.1
Emery, P.W.2
Sanders, T.A.B.3
-
12
-
-
0037369658
-
Overexpression of orphan G-protein-coupled receptor, Gpr49, in human hepatocellular carcinomas with beta-catenin mutations
-
Y. Yamamoto, M. Sakamoto, G. Fujii, H. Tsuiji, K. Kenetaka, M. Asaka and S. Hirohashi, "Overexpression of orphan G-protein-coupled receptor, Gpr49, in human hepatocellular carcinomas with beta-catenin mutations", in Hepatology, 2003, vol. 37, pp. 528-533.
-
(2003)
Hepatology
, vol.37
, pp. 528-533
-
-
Yamamoto, Y.1
Sakamoto, M.2
Fujii, G.3
Tsuiji, H.4
Kenetaka, K.5
Asaka, M.6
Hirohashi, S.7
-
13
-
-
0034644526
-
Linking colorectal cancer to Wnt signaling
-
M. Bienz and H. Clevers, "Linking colorectal cancer to Wnt signaling", in Cell, 2000, vol. 103, pp. 311-320.
-
(2000)
Cell
, vol.103
, pp. 311-320
-
-
Bienz, M.1
Clevers, H.2
-
14
-
-
0033895709
-
Wnt signaling and cancer
-
P. Polakis, "Wnt signaling and cancer". in Genes Dev., 2000, vol. 14, pp. 1837-1851.
-
(2000)
Genes Dev
, vol.14
, pp. 1837-1851
-
-
Polakis, P.1
-
15
-
-
0034584636
-
Involvement of claudin-1 in the beta-catenin/Tcf signaling pathway and its frequent upregulation in human colorectal cancers
-
N. Miwa, M. Furuse, S. Tsukita, N. Niikawa, Y. Nakamura, and Y. Furukawa, "Involvement of claudin-1 in the beta-catenin/Tcf signaling pathway and its frequent upregulation in human colorectal cancers", in Oncol. Res., 2001, vol. 12, pp. 469-476.
-
(2001)
Oncol. Res
, vol.12
, pp. 469-476
-
-
Miwa, N.1
Furuse, M.2
Tsukita, S.3
Niikawa, N.4
Nakamura, Y.5
Furukawa, Y.6
-
16
-
-
20144388953
-
Regulation of the versican promoter by the beta-catenin-T-cell factor complex in vascular smooth muscle cells
-
M. Rahmani, J. T. Read, J. M. Carthy, P. C. McDonald, B. W. Wong, M. Esfandiarei, X. Si, Z. Luo, H. Luo, P. S. Rennie, and B. M. McManus, "Regulation of the versican promoter by the beta-catenin-T-cell factor complex in vascular smooth muscle cells", in J. Biol. Chem., 2005, vol. 280, pp. 13019-13028.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 13019-13028
-
-
Rahmani, M.1
Read, J.T.2
Carthy, J.M.3
McDonald, P.C.4
Wong, B.W.5
Esfandiarei, M.6
Si, X.7
Luo, Z.8
Luo, H.9
Rennie, P.S.10
McManus, B.M.11
-
17
-
-
3142669010
-
SOX9 is an intestine crypt transcription factor, is regulated by the Wnt pathway, and represses the CDX2 and MUC2 genes
-
P. Blache, M. van de Wetering, I. Duluc, C. Domon, P. Berta, J. N. Freund, H. Clevers, and P. Jay. "SOX9 is an intestine crypt transcription factor, is regulated by the Wnt pathway, and represses the CDX2 and MUC2 genes", in J. Cell Biol., 2004, vol. 66, pp. 37-47.
-
(2004)
J. Cell Biol
, vol.66
, pp. 37-47
-
-
Blache, P.1
van de Wetering, M.2
Duluc, I.3
Domon, C.4
Berta, P.5
Freund, J.N.6
Clevers, H.7
Jay, P.8
-
18
-
-
0034644705
-
Regulation of cyclooxygenase-2 and periostin by Wnt-3 in mouse mammary epithelial cells
-
M. Haertel-Wiesmann, Y. Liang, W. J. Fantl, and L. T. Williams, "Regulation of cyclooxygenase-2 and periostin by Wnt-3 in mouse mammary epithelial cells", in J. Biol. Chem., 2000, vol. 275, pp. 32046-32051.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 32046-32051
-
-
Haertel-Wiesmann, M.1
Liang, Y.2
Fantl, W.J.3
Williams, L.T.4
-
19
-
-
21444439296
-
Developmental regulation of Wnt/beta-catenin signals is required for growth plate assembly, cartilage integrity, and endochondral ossification
-
Y. Tamamura, T. Otani, N. Kanatani, E. Koyama, J. Kitagaki, T. Komori, Y. Yamada, F. Costantini, S. Wakisaka, M. Pacifici, M. Iwamoto, and M. Enomoto-Iwamoto, "Developmental regulation of Wnt/beta-catenin signals is required for growth plate assembly, cartilage integrity, and endochondral ossification", in J. Biol. Chem., 2005, vol. 280, pp. 19185-19195.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 19185-19195
-
-
Tamamura, Y.1
Otani, T.2
Kanatani, N.3
Koyama, E.4
Kitagaki, J.5
Komori, T.6
Yamada, Y.7
Costantini, F.8
Wakisaka, S.9
Pacifici, M.10
Iwamoto, M.11
Enomoto-Iwamoto, M.12
-
20
-
-
33644827996
-
Gene expression profiling of a clonal isolate of oxaliplatin-resistant ovarian carcinoma cell line A2780/C10
-
R. R. Varma, S. M. Hector, K. Clark, W. R. Greco, L. Hawthorn, and L. Pendyala, "Gene expression profiling of a clonal isolate of oxaliplatin-resistant ovarian carcinoma cell line A2780/C10", in Oncol. Rep., 2005, vol. 14, pp. 925-932.
-
(2005)
Oncol. Rep
, vol.14
, pp. 925-932
-
-
Varma, R.R.1
Hector, S.M.2
Clark, K.3
Greco, W.R.4
Hawthorn, L.5
Pendyala, L.6
|