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Volumn 37, Issue 4, 2004, Pages 269-284

Induction of comprehensible models for gene expression datasets by subgroup discovery methodology

Author keywords

Comprehensible classification; Disease markers; Gene expression measurements; Machine learning; Subgroup discovery

Indexed keywords

ACUTE GRANULOCYTIC LEUKEMIA; ACUTE LYMPHOBLASTIC LEUKEMIA; ALGORITHM; ARTICLE; DATA BASE; DISEASE CLASSIFICATION; DISEASE MARKER; DNA MICROARRAY; GENE EXPRESSION; GENE INDUCTION; HUMAN; INFORMATION PROCESSING; LEARNING; LEUKEMIA; MACHINE; MODEL; PREDICTION; PRIORITY JOURNAL;

EID: 4744364732     PISSN: 15320464     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbi.2004.07.007     Document Type: Article
Times cited : (39)

References (59)
  • 1
    • 0037780760 scopus 로고    scopus 로고
    • Analysis of the PI-3-kinase-PTEN-AKT pathway in human lymphoma and leukemia using a cell line microarray
    • R.T. Abbott, S. Tripp, S.L. Perkins, K.S. Elenitoba-Johnson, and M.S. Lim Analysis of the PI-3-kinase-PTEN-AKT pathway in human lymphoma and leukemia using a cell line microarray Mod Pathol 16 6 2003 607 612
    • (2003) Mod Pathol , vol.16 , Issue.6 , pp. 607-612
    • Abbott, R.T.1    Tripp, S.2    Perkins, S.L.3    Elenitoba-Johnson, K.S.4    Lim, M.S.5
  • 3
    • 0035788687 scopus 로고    scopus 로고
    • Serum levels of interleukin-18 are increased in patients with cutaneous T-cell lymphoma and cutaneous natural killer-cell lymphoma
    • Y. Amo, Y. Ohta, Y. Hamada, and K. Katsuoka Serum levels of interleukin-18 are increased in patients with cutaneous T-cell lymphoma and cutaneous natural killer-cell lymphoma Br J Dermatol 145 4 2001 674 676
    • (2001) Br J Dermatol , vol.145 , Issue.4 , pp. 674-676
    • Amo, Y.1    Ohta, Y.2    Hamada, Y.3    Katsuoka, K.4
  • 4
    • 0037373369 scopus 로고    scopus 로고
    • Role of leptin on alcohol-induced oxidative stress in Swiss mice
    • V. Balasubramaniyan, S.J. Kalaivani, and N. Nalini Role of leptin on alcohol-induced oxidative stress in Swiss mice Pharmacol Res 47 3 2003 211 216
    • (2003) Pharmacol Res , vol.47 , Issue.3 , pp. 211-216
    • Balasubramaniyan, V.1    Kalaivani, S.J.2    Nalini, N.3
  • 5
    • 0021922869 scopus 로고
    • In vitro biosynthesis of complement protein D by U937 cells
    • S.R. Barnum, and J.E. Volanakis In vitro biosynthesis of complement protein D by U937 cells J Immunol 134 3 1985 1799 1803
    • (1985) J Immunol , vol.134 , Issue.3 , pp. 1799-1803
    • Barnum, S.R.1    Volanakis, J.E.2
  • 6
    • 0022374730 scopus 로고
    • Biosynthesis of complement protein D by HepG2 cells: A comparison of D produced by HepG2 cells, U937 cells and blood monocytes
    • S.R. Barnum, and J.E. Volanakis Biosynthesis of complement protein D by HepG2 cells: a comparison of D produced by HepG2 cells, U937 cells and blood monocytes Eur J Immunol 15 11 1985 1148 1151
    • (1985) Eur J Immunol , vol.15 , Issue.11 , pp. 1148-1151
    • Barnum, S.R.1    Volanakis, J.E.2
  • 7
    • 0026673481 scopus 로고
    • Production and interferon-gamma-mediated regulation of complement component C2 and factors B and D by the astroglioma cell line U105-MG
    • S.R. Barnum, Y. Ishii, A. Agrawal, and J.E. Volanakis Production and interferon-gamma-mediated regulation of complement component C2 and factors B and D by the astroglioma cell line U105-MG Biochem J 287 Pt 2 1992 595 601
    • (1992) Biochem J , vol.287 , Issue.2 , pp. 595-601
    • Barnum, S.R.1    Ishii, Y.2    Agrawal, A.3    Volanakis, J.E.4
  • 9
    • 0037473998 scopus 로고    scopus 로고
    • Critical review of acylation-stimulating protein physiology in humans and rodents
    • K. Cianflone, Z. Xia, and L.Y. Chen Critical review of acylation-stimulating protein physiology in humans and rodents Biochim Biophys Acta 1609 2 2003 127 143
    • (2003) Biochim Biophys Acta , vol.1609 , Issue.2 , pp. 127-143
    • Cianflone, K.1    Xia, Z.2    Chen, L.Y.3
  • 10
    • 0035826360 scopus 로고    scopus 로고
    • Identifying marker genes in transcription profiling data using a mixture of feature relevance experts
    • M.L. Chow, E.J. Moler, and I.S. Mian Identifying marker genes in transcription profiling data using a mixture of feature relevance experts Physiol Genom 3 5 2001 99 111
    • (2001) Physiol Genom , vol.3 , Issue.5 , pp. 99-111
    • Chow, M.L.1    Moler, E.J.2    Mian, I.S.3
  • 11
    • 34249966007 scopus 로고
    • The CN2 induction algorithm
    • P. Clark, and T. Niblett The CN2 induction algorithm Machine Learn 3 4 1989 261 283
    • (1989) Machine Learn , vol.3 , Issue.4 , pp. 261-283
    • Clark, P.1    Niblett, T.2
  • 12
    • 0031136321 scopus 로고    scopus 로고
    • Cloning and characterization of the mouse collapsin response mediator protein-1, Crmp1
    • M. Cohen-Salmon, F. Crozet, G. Rebillard, and C. Petit Cloning and characterization of the mouse collapsin response mediator protein-1, Crmp1 Mamm Genome 8 5 1997 349 351
    • (1997) Mamm Genome , vol.8 , Issue.5 , pp. 349-351
    • Cohen-Salmon, M.1    Crozet, F.2    Rebillard, G.3    Petit, C.4
  • 14
    • 22844456607 scopus 로고    scopus 로고
    • The role of Occam's razor in knowledge discovery
    • P. Domingos The role of Occam's razor in knowledge discovery Data Mining and Knowledge Discovery 3 1999 409 425
    • (1999) Data Mining and Knowledge Discovery , vol.3 , pp. 409-425
    • Domingos, P.1
  • 16
    • 0033782028 scopus 로고    scopus 로고
    • Leptin in the regulation of immunity, inflammation, and hematopoiesis
    • G. Fantuzzi, and R. Faggioni Leptin in the regulation of immunity, inflammation, and hematopoiesis J Leuk Biol 68 2000 437 446
    • (2000) J Leuk Biol , vol.68 , pp. 437-446
    • Fantuzzi, G.1    Faggioni, R.2
  • 17
    • 0141889928 scopus 로고    scopus 로고
    • Molecular analysis of t(X;11)(q24;q23) in an infant with AML-M4
    • J.F. Fu, D.C. Liang, C.P. Yang, J.J. Hsu, and L.Y. Shih Molecular analysis of t(X;11)(q24;q23) in an infant with AML-M4 Genes Chromos Cancer 38 3 2003 253 259
    • (2003) Genes Chromos Cancer , vol.38 , Issue.3 , pp. 253-259
    • Fu, J.F.1    Liang, D.C.2    Yang, C.P.3    Hsu, J.J.4    Shih, L.Y.5
  • 18
    • 0033075882 scopus 로고    scopus 로고
    • Separate-and-conquer rule learning
    • J. Fürnkranz Separate-and-conquer rule learning Artif Intell Rev 13 1999 3 54
    • (1999) Artif Intell Rev , vol.13 , pp. 3-54
    • Fürnkranz, J.1
  • 19
    • 0038433995 scopus 로고    scopus 로고
    • Expert-guided subgroup discovery: Methodology and application
    • D. Gamberger, and N. Lavrač Expert-guided subgroup discovery: Methodology and application J Artif Intell Res 17 2002 501 527
    • (2002) J Artif Intell Res , vol.17 , pp. 501-527
    • Gamberger, D.1    Lavrč, N.2
  • 20
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    • T.R. Golub, D.K. Slonim, P. Tamayo, C. Huard, M. Gaasenbeek, and J.P. Mesirov Molecular classification of cancer: class discovery and class prediction by gene expression monitoring Science 286 1999 531 537
    • (1999) Science , vol.286 , pp. 531-537
    • Golub, T.R.1    Slonim, D.K.2    Tamayo, P.3    Huard, C.4    Gaasenbeek, M.5    Mesirov, J.P.6
  • 24
    • 0036893713 scopus 로고    scopus 로고
    • Prevention of leptin binding to its receptor suppresses rat leukemic cell growth by inhibiting angiogenesis
    • P.O. Iversen, C.A. Drevon, and J.E. Reseland Prevention of leptin binding to its receptor suppresses rat leukemic cell growth by inhibiting angiogenesis Blood 100 2002 4123 4128
    • (2002) Blood , vol.100 , pp. 4123-4128
    • Iversen, P.O.1    Drevon, C.A.2    Reseland, J.E.3
  • 26
    • 0035079375 scopus 로고    scopus 로고
    • Prostaglandin D synthase (beta-trace) in meningeal hemangiopericytoma
    • M. Kawashima, S.O. Suzuki, T. Yamashima, M. Fukui, and T. Iwaki Prostaglandin D synthase (beta-trace) in meningeal hemangiopericytoma Mod Pathol 14 3 2001 197 201
    • (2001) Mod Pathol , vol.14 , Issue.3 , pp. 197-201
    • Kawashima, M.1    Suzuki, S.O.2    Yamashima, T.3    Fukui, M.4    Iwaki, T.5
  • 27
  • 28
    • 0030586849 scopus 로고    scopus 로고
    • Structural organization of the human microsomal glutathione S-transferase gene (GST12)
    • M.J. Kelner, M.N. Stokely, N.E. Stovall, and M.A. Montoya Structural organization of the human microsomal glutathione S-transferase gene (GST12) Genomics 36 1 1996 100 103
    • (1996) Genomics , vol.36 , Issue.1 , pp. 100-103
    • Kelner, M.J.1    Stokely, M.N.2    Stovall, N.E.3    Montoya, M.A.4
  • 29
    • 0041520660 scopus 로고    scopus 로고
    • MLL/SEPTIN6 chimeric transcript from inv ins(X;11)(q24;q23q13) in acute monocytic leukemia: Report of a case and review of the literature
    • H.J. Kim, C.S. Ki, Q. Park, H.H. Koo, K.H. Yoo, and E.J. Kim MLL/SEPTIN6 chimeric transcript from inv ins(X;11)(q24;q23q13) in acute monocytic leukemia: report of a case and review of the literature Genes Chromos Cancer 38 1 2003 8 12
    • (2003) Genes Chromos Cancer , vol.38 , Issue.1 , pp. 8-12
    • Kim, H.J.1    Ki, C.S.2    Park, Q.3    Koo, H.H.4    Yoo, K.H.5    Kim, E.J.6
  • 30
    • 0035987843 scopus 로고    scopus 로고
    • Synthesis of factor D by gastric cancer-derived cell lines
    • E. Kitano, and H. Kitamura Synthesis of factor D by gastric cancer-derived cell lines Int. Immunopharmacol 2 6 2002 843 848
    • (2002) Int. Immunopharmacol , vol.2 , Issue.6 , pp. 843-848
    • Kitano, E.1    Kitamura, H.2
  • 32
    • 0033104708 scopus 로고    scopus 로고
    • Expression and function of leptin receptor isoforms in myeloid leukemia and myelodysplastic syndromes: Proliferative and anti-apoptotic activities
    • M. Konopleva, A. Mikhail, Z. Estrov, S. Zhao, D. Harris, and G. Sanchez-Williams Expression and function of leptin receptor isoforms in myeloid leukemia and myelodysplastic syndromes: proliferative and anti-apoptotic activities Blood 93 1999 1668 1676
    • (1999) Blood , vol.93 , pp. 1668-1676
    • Konopleva, M.1    Mikhail, A.2    Estrov, Z.3    Zhao, S.4    Harris, D.5    Sanchez-Williams, G.6
  • 33
    • 0036866625 scopus 로고    scopus 로고
    • Glutathione S-transferase P1 genetic polymorphisms and susceptibility to childhood acute lymphoblastic leukaemia
    • M. Krajinovic, D. Labuda, and D. Sinnett Glutathione S-transferase P1 genetic polymorphisms and susceptibility to childhood acute lymphoblastic leukaemia Pharmacogenetics 12 8 2002 655 658
    • (2002) Pharmacogenetics , vol.12 , Issue.8 , pp. 655-658
    • Krajinovic, M.1    Labuda, D.2    Sinnett, D.3
  • 37
    • 0034873384 scopus 로고    scopus 로고
    • Serum levels of interleukin-18 and sICAM-1 in patients affected by breast cancer: Preliminary considerations
    • R.A. Merendino, S. Gangemi, A. Ruello, A. Bene, E. Losi, and G. Lonbardo Serum levels of interleukin-18 and sICAM-1 in patients affected by breast cancer: preliminary considerations Int J Biol Markers 16 2 2001 126 129
    • (2001) Int J Biol Markers , vol.16 , Issue.2 , pp. 126-129
    • Merendino, R.A.1    Gangemi, S.2    Ruello, A.3    Bene, A.4    Losi, E.5    Lonbardo, G.6
  • 42
    • 0030728769 scopus 로고    scopus 로고
    • Interleukin 18 enhances Fas ligand expression and induces apoptosis in Fas-expressing human myelomonocytic KG-1 cells
    • T. Ohtsuki, M.J. Micallef, K. Kohno, T. Tanimoto, M. Ikeda, and M. Kurimoto Interleukin 18 enhances Fas ligand expression and induces apoptosis in Fas-expressing human myelomonocytic KG-1 cells Anticancer Res 17 5A 1997 3253 3258
    • (1997) Anticancer Res , vol.17 , Issue.5 , pp. 3253-3258
    • Ohtsuki, T.1    Micallef, M.J.2    Kohno, K.3    Tanimoto, T.4    Ikeda, M.5    Kurimoto, M.6
  • 43
    • 0028845730 scopus 로고
    • Cloning of a new cytokine that induces IFN-gamma production by T cells
    • H. Okamura, H. Tsutsi, T. Komatsu, M. Yutsudo, A. Hakura, and T. Tanimoto Cloning of a new cytokine that induces IFN-gamma production by T cells Nature 378 6552 1995 88 91
    • (1995) Nature , vol.378 , Issue.6552 , pp. 88-91
    • Okamura, H.1    Tsutsi, H.2    Komatsu, T.3    Yutsudo, M.4    Hakura, A.5    Tanimoto, T.6
  • 44
    • 0037081079 scopus 로고    scopus 로고
    • SEPTIN6, a human homologue to mouse Septin6, is fused to MLL in infant acute myeloid leukemia with complex chromosomal abnormalities involving 11q23 and Xq24
    • R. Ono, T. Taki, T. Taketani, H. Kawaguchi, M. Taniwaki, and T. Okamura SEPTIN6, a human homologue to mouse Septin6, is fused to MLL in infant acute myeloid leukemia with complex chromosomal abnormalities involving 11q23 and Xq24 Cancer Res 62 2 2002 333 337
    • (2002) Cancer Res , vol.62 , Issue.2 , pp. 333-337
    • Ono, R.1    Taki, T.2    Taketani, T.3    Kawaguchi, H.4    Taniwaki, M.5    Okamura, T.6
  • 46
    • 0001259758 scopus 로고
    • Overfitting avoidance as bias
    • C. Schaffer Overfitting avoidance as bias Machine Learning 10 1993 153 178
    • (1993) Machine Learning , vol.10 , pp. 153-178
    • Schaffer, C.1
  • 47
    • 0037063170 scopus 로고    scopus 로고
    • MLL-SEPTIN6 fusion recurs in novel translocation of chromosomes 3, X, and 11 in infant acute myelomonocytic leukaemia and in t(X;11) in infant acute myeloid leukaemia, and MLL genomic breakpoint in complex MLL-SEPTIN6 rearrangement is a DNA topoisomerase II cleavage site
    • D.J. Slater, E. Hilgenfeld, E.F. Rappaport, N. Shah, R.G. Meek, and W.R. Williams MLL-SEPTIN6 fusion recurs in novel translocation of chromosomes 3, X, and 11 in infant acute myelomonocytic leukaemia and in t(X;11) in infant acute myeloid leukaemia, and MLL genomic breakpoint in complex MLL-SEPTIN6 rearrangement is a DNA topoisomerase II cleavage site Oncogene 21 30 2002 4706 4714
    • (2002) Oncogene , vol.21 , Issue.30 , pp. 4706-4714
    • Slater, D.J.1    Hilgenfeld, E.2    Rappaport, E.F.3    Shah, N.4    Meek, R.G.5    Williams, W.R.6
  • 49
    • 0036168728 scopus 로고    scopus 로고
    • Chemotherapy-induced immunosuppression and reconstitution of immune function
    • T.A. Steele Chemotherapy-induced immunosuppression and reconstitution of immune function Leuk Res 26 4 2002 411 414
    • (2002) Leuk Res , vol.26 , Issue.4 , pp. 411-414
    • Steele, T.A.1
  • 50
    • 0035667732 scopus 로고    scopus 로고
    • Expression of prostaglandin D synthase in ovarian cancer
    • B. Su, M. Guan, R. Zhao, and Y. Lu Expression of prostaglandin D synthase in ovarian cancer Clin Chem Lab Med 39 12 2001 1198 1203
    • (2001) Clin Chem Lab Med , vol.39 , Issue.12 , pp. 1198-1203
    • Su, B.1    Guan, M.2    Zhao, R.3    Lu, Y.4
  • 51
    • 0032855445 scopus 로고    scopus 로고
    • Oversecretion of IL-18 in haemophagocytic lymphohistiocytosis: A novel marker of disease activity
    • H. Takada, S. Ohga, Y. Mizuno, A. Suminoe, A. Matsuzaki, and K. Ihara Oversecretion of IL-18 in haemophagocytic lymphohistiocytosis: a novel marker of disease activity Br J Haematol 106 1 1999 182 189
    • (1999) Br J Haematol , vol.106 , Issue.1 , pp. 182-189
    • Takada, H.1    Ohga, S.2    Mizuno, Y.3    Suminoe, A.4    Matsuzaki, A.5    Ihara, K.6
  • 52
    • 0030869609 scopus 로고    scopus 로고
    • Characterization of anti-human interleukin-18 (IL-18)/interferon-gamma- inducing factor (IGIF) monoclonal antibodies and their application in the measurement of human IL-18 by ELISA
    • M. Taniguchi, K. Nagaoka, T. Kunikata, T. Kayano, H. Yamauchi, and S. Nakamura Characterization of anti-human interleukin-18 (IL-18)/interferon-gamma- inducing factor (IGIF) monoclonal antibodies and their application in the measurement of human IL-18 by ELISA J Immunol Methods 206 1-2 1997 107 113
    • (1997) J Immunol Methods , vol.206 , Issue.12 , pp. 107-113
    • Taniguchi, M.1    Nagaoka, K.2    Kunikata, T.3    Kayano, T.4    Yamauchi, H.5    Nakamura, S.6
  • 53
    • 0037108108 scopus 로고    scopus 로고
    • Negative prognostic value of glutathione S-transferase (GSTM1 and GSTT1) deletions in adult acute myeloid leukemia
    • M.T. Voso, F. D'Alo, R. Putzulu, L. Mele, A. Scardocci, and P. Chiusolo Negative prognostic value of glutathione S-transferase (GSTM1 and GSTT1) deletions in adult acute myeloid leukemia Blood 100 2002 2703 2707
    • (2002) Blood , vol.100 , pp. 2703-2707
    • Voso, M.T.1    D'Alo, F.2    Putzulu, R.3    Mele, L.4    Scardocci, A.5    Chiusolo, P.6
  • 55
    • 0042744837 scopus 로고    scopus 로고
    • Survival of acute myeloid leukemia cells requires PI3 kinase activation
    • Q. Xu, S.-E. Simpson, T.J. Scialla, A. Bagg, and M. Carroll Survival of acute myeloid leukemia cells requires PI3 kinase activation Blood 102 2003 972 980
    • (2003) Blood , vol.102 , pp. 972-980
    • Xu, Q.1    Simpson, S.-E.2    Scialla, T.J.3    Bagg, A.4    Carroll, M.5
  • 56
    • 0027443880 scopus 로고
    • Molecular cloning of M6: Identification of a PLP/DM20 gene family
    • Y. Yan, C. Lagenaur, and V. Narayanan Molecular cloning of M6: identification of a PLP/DM20 gene family Neuron 11 3 1993 423 431
    • (1993) Neuron , vol.11 , Issue.3 , pp. 423-431
    • Yan, Y.1    Lagenaur, C.2    Narayanan, V.3
  • 57
    • 0036348548 scopus 로고    scopus 로고
    • Clinical significance of IL-18 gene over-expression in AML
    • B. Zhang, Y. Wang, G.G. Zheng, X.T. Ma, G. Li, and F.K. Zhang Clinical significance of IL-18 gene over-expression in AML Leuk Res 26 10 2002 887 892
    • (2002) Leuk Res , vol.26 , Issue.10 , pp. 887-892
    • Zhang, B.1    Wang, Y.2    Zheng, G.G.3    Ma, X.T.4    Li, G.5    Zhang, F.K.6
  • 58
    • 0037600776 scopus 로고    scopus 로고
    • Expression of IL-18 and its receptor in human leukemia cells
    • B. Zhang, X.T. Ma, G.G. Zheng, G. Li, Q. Rao, and K.F. Wu Expression of IL-18 and its receptor in human leukemia cells Leuk Res 27 9 2003 813 822
    • (2003) Leuk Res , vol.27 , Issue.9 , pp. 813-822
    • Zhang, B.1    Ma, X.T.2    Zheng, G.G.3    Li, G.4    Rao, Q.5    Wu, K.F.6
  • 59
    • 0036205647 scopus 로고    scopus 로고
    • Functional role of phosphatidylinositol 3-kinase in direct tumor lysis by human natural killer cells
    • B. Zhong, J.H. Liu, D.L. Gilvary, K. Jiang, M. Kasuga, and C.A. Ritchey Functional role of phosphatidylinositol 3-kinase in direct tumor lysis by human natural killer cells Immunobiology 205 1 2002 74 94
    • (2002) Immunobiology , vol.205 , Issue.1 , pp. 74-94
    • Zhong, B.1    Liu, J.H.2    Gilvary, D.L.3    Jiang, K.4    Kasuga, M.5    Ritchey, C.A.6


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