Lactobacillus equigenerosi sp. nov., a coccoid species isolated from faeces of thoroughbred racehorses

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 4, 2008, Pages 914-918

  Endo, Akihito ^a,b   Roos, Stefan ^c   Satoh, Eiichi ^a   Morita, Hidetoshi ^d   Okada, Sanae ^a  

^a TOKYO UNIVERSITY OF AGRICULTURE   (Japan)

^b NATIONAL INSTITUTE OF HEALTH SCIENCES   (Japan)

^c SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^d AZABU UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; RNA 16S; BACTERIAL RNA;

ARTICLE; BACTERIAL CELL; BACTERIAL STRAIN; BACTERIUM ISOLATE; BACTERIUM ISOLATION; BIOCHEMISTRY; CLUSTER ANALYSIS; DNA DNA HYBRIDIZATION; FECES; GENE SEQUENCE; HORSE; LACTIC ACID BACTERIUM; LACTOBACILLUS; LACTOBACILLUS EQUIGENEROSI; LACTOBACILLUS FERMENTUM; LACTOBACILLUS GASTRICUS; LACTOBACILLUS INGLUVIEI; LACTOBACILLUS MUCOSAE; LACTOBACILLUS REUTERI; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TAXONOMY; ANIMAL; BACTERIAL GENE; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; PHENOTYPE; SCANNING ELECTRON MICROSCOPY;

COCCOIDEA; CONGIOPODIDAE; EQUIDAE; LACTOBACILLUS; LACTOBACILLUS FERMENTUM; LACTOBACILLUS GASTRICUS; LACTOBACILLUS INGLUVIEI; LACTOBACILLUS MUCOSAE; LACTOBACILLUS REUTERI;

ANIMALS; FECES; GENES, BACTERIAL; HORSES; LACTOBACILLUS; MICROSCOPY, ELECTRON, SCANNING; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S;

EID: 47249095387     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65250-0     Document Type: Article

References (32)

1. Baelo, M., Vancanneyt, M., Devriese, L. &,Lefebvre, K, Swings, J. & Haesebrouck F. (2003). Lactobacillus ingluviei sp. nov., isolated from the intestinal tract of pigeons. Int J Syst Evol Microbiol 53, 133-136.
2. Brashears, M. M., Jaroni, D. & Trimble, J. (2003). Isolation, selectidn, and characterization of lactic acid bacteria for a competitive exclusion product to reduce shedding of Escherichia coli O 157: H7 in cattle. J Food Prot 66, 355-363.
3. Casey, P. G., Casey, G. D., Gardiner, G. E., Tangney, M., Stanton, C., Ross, R. P., Hill, C. & Fitzgerald, G. F. (2004). Isolation and characterization of anti-Salmonella lactic acid bacteria from the porcine gastrointestinal tract. Lett Appl Microbiol 39, 431-438.
4. Cavalli-Sforza, L. L. & Edwards, A. W. F. (1967). Phylogenetic analysis models and estimation procedures. Am J Hum Genet 19, 233-257.
5. Collins, M. D., Rodrigues, U. M., Ash, C., Aguirre, M., Farrow, J. A. E., Martinez-Murcia, A., Philips, B. A., Williams, A. M. & Wallbanks, S. (1991). Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse transcriptase sequencing of 16S rRNA. FEMS Microbiol Lett 77, 5-12.
6. Collins, M. D., Samelis, J., Metaxopoulos, J. & Wallbanks, S. (1993). Taxonomic studies on some leuconostoc-like organisms from fermented sausages: description of a new genus Weissella for the Leuconostoc paramesenteroides group of species. J Appl Microbiol 75, 595-603.
7. Dellegilo, F., Torriani, S. & Fells, G. E. (2004). Reclassification of Lactobacillus cellobiosus Rogosa et al. 1953 as a later synonym of Lactobacillus fermentum Beijerinck 1901. Int J Syst Evol Microbiol 54, 809-812.
8. Endo, A. & Okada, S. (2005). Lactobacillus satsumensis sp. nov., isolated from mashes of shochu, a traditional Japanese distilled spirit made from fermented rice and other starchy materials. Int J Syst Evol Microbiol 55, 83-85.
9. Endo, A. & Okada, S. (2006). Oenococcus kitaharae sp. nov., a novel non-acidophilic and non-malolactic fermenting oenococcus isolated from a composting distilled shochu residue. Int J Syst Evol Microbiol 56, 2345-2348.
10. Endo, A., Okada, S. & Morita, H. (2007). Molecular profiling of Lactobacillus, Streptococcus, and Bifidobacterium species in feces of active racehorses. J Gen Appl Microbiol 53, 191-200.
11. Ezaki, T., Yamamoto, N. Ninomiya, K., Suzuki, S. & Yabuuchi, E. (1983). Transfer of Peptococcus indolicus, Peptococcus asaccharolyticus, Peptococcus prevotii, and Peptococcus magnus to the genus Peptostreptococcus and proposal of Peptostreptococcus tetradius sp. nov. Int J Syst Bacteriol 33, 683-698.
12. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
13. Garvie, E. I. (1986). Genus Pediococcus Claussen 1903. In Bergey's Manual of Systematic Bacteriology, vol. 2, pp. 1075-1079. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
14. Hammes, W. P. & Hertel, C. (2006). The genera Lactobacillus and Carnobacterium. In The Prokaryotes, 3rd edn, vol. 4, pp. 320-403. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
15. Hammes, W. P. & Vogel, R. F. (1996). The genus Lactobacillus. In The Lactic Acid Bacteria, vol. 2, The Genera of Lactic Acid Bacteria, pp. 19-54. Edited by B. J. B. Wood & W. H. Holzapfel. London: Blackie.
16. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
17. Kluge, A. G. Crarris, F. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
18. Liu, L., Zhang, B., Tong, H. & Dong, X. (2006). Pediococcus ethanolidurans sp. nov., isolated from the walls of a distilled-spirit-fermenting cellar. Int J Syst Evol Microbiol 56, 2405-2408.
19. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
20. Morita, H., Shiratori, M., Murakami, M., Takami, H., Kato, Y., Endo, A., Nakajima, F., Takagi, M., Akita, H. & other authors (2007). Lactobacillus hayakitensis sp. nov., isolated from intestines of healthy thoroughbreds. Int J Syst Evol Microbiol 57, 2836-2839.
21. Ouwehand, A. C., Salminen, S. & Isolauri, E. (2002). Probiotics: an overview of beneficial effects. Antonie van Leeuwenhoek 82, 279-289.
22. Rogosa, M. (1974). Genus Lactobacillus. In Bergey's Manual of Determinative Bacteriology, 8th edn, pp. 576-593. Edited by R. E. Buchanan & N. E. Gibbons. Baltimore: Williams & Wilkins.
23. Roos, S., Karner, F., Axelsson, L. & Jonsson, H. (2000). Lactobacillus mucosae sp. nov., a new species with in vitro mucus-binding activity isolated from pig intestine. Int J Syst Evol Microbiol 501, 251-258.
24. Roos, S., Engstrand, L. & Jonsson, H. (2005). Lactabacillus gastricus sp. nov., Lactobacillus antri sp. nov., Lactobacillus kalixensis sp, nov. and Lactobacillus ultunensis sp. nov., isolated from human stomach mucosa. Int J Syst Evol Microbiol 55, 77-82.
25. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
26. Schleifer, K. H. & Ludwig, W. (1995). Phylogeny of the genus Lactobacillus and related genera. Syst Appl Microbiol 18, 461-467.
27. Simpson, W. J. & Taguchi, H. (1996). The genus Pediococcus with notes on the genera Tetragenococcus and Aerococcus. In The Lactic Acid Bacteria, vol. 2, The Genera of Lactic Acid Bacteria, pp. 125-172. Edited by B. J. B. Wood & W. H. Holzapfel. London: Blackie.
28. Stackebrandt, E. & Ebers, J. (2606). Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 33, 152-155.
29. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
30. Thompson, J. D., Gibson, T. J, Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
31. Tong, H. & Dong, X. (2005). Lactobacillus concavus sp. nov., isolated from the walls of a distilled spirit fermenting cellar in China. Int J Syst Evol Microbiol 55, 2199-2202.
32. Walter, J., Hertel, C., Tannock, G. W., Lis, C. M., Munro, K. & Hammes, W. P. (2001). Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human faeces by using group-specific PCR primers and denaturing gradient gel electrophoresis. Appl Environ Microbiol 67, 2578-2585.