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Volumn 59, Issue 10, 2008, Pages 2875-2890

A candidate gene survey of quantitative trait loci affecting chemical composition in tomato fruit

Author keywords

Candidate genes; Introgressed lines; Metabolite content; Quantitative trait loci; Solanum lycopersicum; Solanum pennelli; Tomato

Indexed keywords

VEGETABLE PROTEIN;

EID: 46849103376     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/ern146     Document Type: Article
Times cited : (42)

References (41)
  • 2
    • 33845665396 scopus 로고    scopus 로고
    • Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behaviour
    • Carrari F, Baxter C, Usadel B, et al. 2006. Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behaviour. Plant Physiology 142, 1380-1396.
    • (2006) Plant Physiology , vol.142 , pp. 1380-1396
    • Carrari, F.1    Baxter, C.2    Usadel, B.3
  • 4
    • 35548995044 scopus 로고    scopus 로고
    • Changes in regulation of a transcription factor lead to autogamy in cultivated tomatoes
    • Chen KY, Cong B, Wing R, Vrebalov J, Tanksley SD. 2007. Changes in regulation of a transcription factor lead to autogamy in cultivated tomatoes. Science 318, 643-645.
    • (2007) Science , vol.318 , pp. 643-645
    • Chen, K.Y.1    Cong, B.2    Wing, R.3    Vrebalov, J.4    Tanksley, S.D.5
  • 5
    • 0024297354 scopus 로고
    • Multiple sequence alignment with hierarchical clustering
    • Corpet T. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Research 16, 10881-10890.
    • (1988) Nucleic Acids Research , vol.16 , pp. 10881-10890
    • Corpet, T.1
  • 6
    • 0028846653 scopus 로고
    • An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL
    • Eshed Y, Zamir D. 1995. An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 141, 1147-1162.
    • (1995) Genetics , vol.141 , pp. 1147-1162
    • Eshed, Y.1    Zamir, D.2
  • 9
    • 4544345787 scopus 로고    scopus 로고
    • Zooming in on a quantitative trait for tomato yield using interspecific introgressions
    • Fridman E, Carrari F, Liu YS, Fernie A, Zamir D. 2004. Zooming in on a quantitative trait for tomato yield using interspecific introgressions. Science 305, 1786-1789.
    • (2004) Science , vol.305 , pp. 1786-1789
    • Fridman, E.1    Carrari, F.2    Liu, Y.S.3    Fernie, A.4    Zamir, D.5
  • 10
    • 33747472599 scopus 로고    scopus 로고
    • A chromoplast-specific carotenoid biosynthesis pathway is revealed by cloning of the tomato white-flower locus
    • Galpaz N, Ronen G, Khalfa Z, Zamir D, Hirschberg J. 2006. A chromoplast-specific carotenoid biosynthesis pathway is revealed by cloning of the tomato white-flower locus. The Plant Cell 18, 1947-1960.
    • (2006) The Plant Cell , vol.18 , pp. 1947-1960
    • Galpaz, N.1    Ronen, G.2    Khalfa, Z.3    Zamir, D.4    Hirschberg, J.5
  • 12
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon D, Abajian C, Green P. 1998. Consed: a graphical tool for sequence finishing. Genome Research 8, 195-202.
    • (1998) Genome Research , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 13
    • 33644914683 scopus 로고    scopus 로고
    • Sucrose transporter LeSUT1 and LeSUT2 inhibition affects tomato fruit development in different ways
    • Hackel A, Schauer N, Carrari F, Fernie AR, Grimm B, Kühn C. 2006. Sucrose transporter LeSUT1 and LeSUT2 inhibition affects tomato fruit development in different ways. The Plant Journal 45, 180-192.
    • (2006) The Plant Journal , vol.45 , pp. 180-192
    • Hackel, A.1    Schauer, N.2    Carrari, F.3    Fernie, A.R.4    Grimm, B.5    Kühn, C.6
  • 14
    • 34547175751 scopus 로고    scopus 로고
    • Han S, Seo YS, Kim D, Sung S-K, Kim WT. 2007. Expression of MdCAS1 and MdCAS2, encoding apple β-cyanoalanine synthase homologs, is concomitantly induced during ripening and implicates MdCASs in the possible role of the cyanide detoxification in Fuji apple (Malus domestica Borkh.) fruits. Plant Cell Reports 26, 1321-1331.
    • Han S, Seo YS, Kim D, Sung S-K, Kim WT. 2007. Expression of MdCAS1 and MdCAS2, encoding apple β-cyanoalanine synthase homologs, is concomitantly induced during ripening and implicates MdCASs in the possible role of the cyanide detoxification in Fuji apple (Malus domestica Borkh.) fruits. Plant Cell Reports 26, 1321-1331.
  • 16
    • 38549126643 scopus 로고    scopus 로고
    • KEGG for linking genomes to life and the environment
    • Kanehisa M, Araki M, Goto S, et al. 2008. KEGG for linking genomes to life and the environment. Nucleic Acids Research 36, 480-484.
    • (2008) Nucleic Acids Research , vol.36 , pp. 480-484
    • Kanehisa, M.1    Araki, M.2    Goto, S.3
  • 17
    • 33745184059 scopus 로고    scopus 로고
    • Regulatory role of cystathioninec- γ-synthase and de novo synthesis of methionine in the ethylene production during tomato fruit ripening
    • Katz YS, Galili G, Amir R. 2006. Regulatory role of cystathioninec- γ-synthase and de novo synthesis of methionine in the ethylene production during tomato fruit ripening. Plant Molecular Biology 61, 255-268.
    • (2006) Plant Molecular Biology , vol.61 , pp. 255-268
    • Katz, Y.S.1    Galili, G.2    Amir, R.3
  • 18
    • 34548050673 scopus 로고    scopus 로고
    • Differences in regulation of carbohydrate metabolism during early fruit development between domesticated tomato and two wild relatives
    • Kortstee AJ, Appeldoorn NJ, Oortwijn ME, Visser RG. 2007. Differences in regulation of carbohydrate metabolism during early fruit development between domesticated tomato and two wild relatives. Planta 226, 929-939.
    • (2007) Planta , vol.226 , pp. 929-939
    • Kortstee, A.J.1    Appeldoorn, N.J.2    Oortwijn, M.E.3    Visser, R.G.4
  • 19
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 20
    • 36549080467 scopus 로고    scopus 로고
    • An integrated view of quantitative trait variation using tomato interspecific introgression lines
    • Lippman ZB, Semel Y, Zamir D. 2007. An integrated view of quantitative trait variation using tomato interspecific introgression lines. Current Opinion in Genetics & Development 17, 1-8.
    • (2007) Current Opinion in Genetics & Development , vol.17 , pp. 1-8
    • Lippman, Z.B.1    Semel, Y.2    Zamir, D.3
  • 21
    • 33947425559 scopus 로고    scopus 로고
    • The cauliflower Or gene encodes a Dnaj cysteine-rich domain-containing protein that mediates high levels of β-carotene accumulation
    • Lu S, Van Eck J, Zhou X, et al. 2006. The cauliflower Or gene encodes a Dnaj cysteine-rich domain-containing protein that mediates high levels of β-carotene accumulation. The Plant Cell 18, 3594-3605.
    • (2006) The Plant Cell , vol.18 , pp. 3594-3605
    • Lu, S.1    Van Eck, J.2    Zhou, X.3
  • 23
    • 27244454556 scopus 로고    scopus 로고
    • The SOL genomics network: A comparative resource for Solanaceae biology and beyond
    • Mueller LA, Solow TH, Taylor N, et al. 2005a. The SOL genomics network: a comparative resource for Solanaceae biology and beyond. Plant Physiology 138, 1310-1317.
    • (2005) Plant Physiology , vol.138 , pp. 1310-1317
    • Mueller, L.A.1    Solow, T.H.2    Taylor, N.3
  • 24
    • 21044436749 scopus 로고    scopus 로고
    • The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL)
    • Mueller LA, Tanksley SD, Giovannoni JJ, et al. 2005b. The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL). Comparative and Functional Genomics 6, 153-158.
    • (2005) Comparative and Functional Genomics , vol.6 , pp. 153-158
    • Mueller, L.A.1    Tanksley, S.D.2    Giovannoni, J.J.3
  • 25
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M, Gojobori T. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biology and Evolution 5, 418-426.
    • (1986) Molecular Biology and Evolution , vol.5 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 27
    • 37549042772 scopus 로고    scopus 로고
    • Genetic and molecular regulation of fruit and plant domestication traits in tomato and pepper
    • Paran I, Van der Knaap E. 2007. Genetic and molecular regulation of fruit and plant domestication traits in tomato and pepper. Journal of Experimental Botany 58, 3841-3852.
    • (2007) Journal of Experimental Botany , vol.58 , pp. 3841-3852
    • Paran, I.1    Van der Knaap, E.2
  • 28
    • 33646382386 scopus 로고    scopus 로고
    • Believe it or not, QTLs are accurate!
    • Price A. 2006. Believe it or not, QTLs are accurate! Trends in Plant Science 11, 213-216.
    • (2006) Trends in Plant Science , vol.11 , pp. 213-216
    • Price, A.1
  • 29
    • 33751265748 scopus 로고    scopus 로고
    • The diversity of the DnaJ/Hsp40 family, the crucial partners for Hsp70 chaperones
    • Qiu XB, Shao YM, Miao S, Wang L. 2006. The diversity of the DnaJ/Hsp40 family, the crucial partners for Hsp70 chaperones. Cell and Molecular Life Science 63, 2560-2570.
    • (2006) Cell and Molecular Life Science , vol.63 , pp. 2560-2570
    • Qiu, X.B.1    Shao, Y.M.2    Miao, S.3    Wang, L.4
  • 30
  • 31
    • 20444391743 scopus 로고    scopus 로고
    • To clone or not to clone plant QTLs: Present and future challenges
    • Salvi S, Tuberosa R. 2005. To clone or not to clone plant QTLs: present and future challenges. Trends in Plant Science 10, 297-304.
    • (2005) Trends in Plant Science , vol.10 , pp. 297-304
    • Salvi, S.1    Tuberosa, R.2
  • 32
    • 33947307759 scopus 로고    scopus 로고
    • Plant metabolomics: Towards biological functions and mechanism
    • Schauer N, Fernie A. 2006. Plant metabolomics: towards biological functions and mechanism. Trends in Plant Science 11, 508-516.
    • (2006) Trends in Plant Science , vol.11 , pp. 508-516
    • Schauer, N.1    Fernie, A.2
  • 33
    • 33645746673 scopus 로고    scopus 로고
    • Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
    • Schauer N, Semel Y, Roessner U, et al. 2006. Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nature Biotechnology 24, 447-454.
    • (2006) Nature Biotechnology , vol.24 , pp. 447-454
    • Schauer, N.1    Semel, Y.2    Roessner, U.3
  • 36
    • 0036255811 scopus 로고    scopus 로고
    • Candidate-gene approaches for studying complex genetic traits: Practical considerations
    • Tabor HK, Risch NJ, Myers RM. 2002. Candidate-gene approaches for studying complex genetic traits: practical considerations. Nature Reviews Genetics 3, 1-7.
    • (2002) Nature Reviews Genetics , vol.3 , pp. 1-7
    • Tabor, H.K.1    Risch, N.J.2    Myers, R.M.3
  • 37
    • 0032964297 scopus 로고    scopus 로고
    • BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    • Tatusova TA, Madden TL. 1999. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiology Letters 174, 247-250.
    • (1999) FEMS Microbiology Letters , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 39
    • 0035984046 scopus 로고    scopus 로고
    • Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing
    • Van der Hoeven R, Ronning C, Giovannoni J, Martin G, Tanksley S. 2002. Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing. The Plant Cell 14, 1441-1456.
    • (2002) The Plant Cell , vol.14 , pp. 1441-1456
    • Van der Hoeven, R.1    Ronning, C.2    Giovannoni, J.3    Martin, G.4    Tanksley, S.5
  • 40
    • 26944456370 scopus 로고    scopus 로고
    • The Arabidopsis plastidic methionine sulfoxide reductase B proteins: Sequence and activity characteristics, comparison of the expression with plastidic methionine sulfoxide reductase A, and induction by photooxidative stress
    • Vieira Dos Santos C, Cuiné S, Rouhier N, Rey P. 2005. The Arabidopsis plastidic methionine sulfoxide reductase B proteins: sequence and activity characteristics, comparison of the expression with plastidic methionine sulfoxide reductase A, and induction by photooxidative stress. Plant Physiology 138, 909-922.
    • (2005) Plant Physiology , vol.138 , pp. 909-922
    • Vieira Dos Santos, C.1    Cuiné, S.2    Rouhier, N.3    Rey, P.4
  • 41
    • 27144503824 scopus 로고    scopus 로고
    • Cloning and mapping of genes involved in tomato ascorbic acid biosynthesis and metabolism
    • Zou L, Li H, Ouyang B, Zhang J, Ye Z. 2006. Cloning and mapping of genes involved in tomato ascorbic acid biosynthesis and metabolism. Plant Science 170, 120-127.
    • (2006) Plant Science , vol.170 , pp. 120-127
    • Zou, L.1    Li, H.2    Ouyang, B.3    Zhang, J.4    Ye, Z.5


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