-
1
-
-
0000086322
-
Thiamin-dependent enzymes
-
L. Sinnott Academic Press San Diego
-
R. Schowen Thiamin-dependent enzymes L. Sinnott Comprehensive Catalysis 1998 Academic Press San Diego 217 266
-
(1998)
Comprehensive Catalysis
, pp. 217-266
-
-
Schowen, R.1
-
2
-
-
2242446202
-
Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms
-
D.A. Rodionov, A.G. Vitreschak, A.A. Mironov, and M.S. Gelfand Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms J. Biol. Chem. 277 2002 48949 48959
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 48949-48959
-
-
Rodionov, D.A.1
Vitreschak, A.G.2
Mironov, A.A.3
Gelfand, M.S.4
-
3
-
-
1842555070
-
Rational protein crystallization by mutational surface engineering
-
Z.S. Derewenda Rational protein crystallization by mutational surface engineering Structure 12 2004 1 20
-
(2004)
Structure
, vol.12
, pp. 1-20
-
-
Derewenda, Z.S.1
-
5
-
-
0028951187
-
The allosteric ligand site in the Vmax-type cooperative enzyme phosphoglycerate dehydrogenase
-
D.J. Schuller, G.A. Grant, and L.J. Banaszak The allosteric ligand site in the Vmax-type cooperative enzyme phosphoglycerate dehydrogenase Nature Struct. Biol. 2 1995 69 76
-
(1995)
Nature Struct. Biol.
, vol.2
, pp. 69-76
-
-
Schuller, D.J.1
Grant, G.A.2
Banaszak, L.J.3
-
6
-
-
4644309404
-
Structure of 3-benzyl-5-(2-hydroxyethyl)-4-methyl-1,3-thiazolium chloride
-
W. Shin, and C.H. Chae Structure of 3-benzyl-5-(2-hydroxyethyl)-4-methyl- 1,3-thiazolium chloride Acta Crystallog. sect. C 49 1993 68 70
-
(1993)
Acta Crystallog. Sect. C
, vol.49
, pp. 68-70
-
-
Shin, W.1
Chae, C.H.2
-
7
-
-
0017765011
-
Stereochemistry of intermediates in thiamine catalysis. 2. Crystal structure of dl-2-(alpha-hydroxybenzyl)thiamine chloride hydrochloride trihydrate
-
J. Pletcher, M. Sax, G. Blank, and M. Wood Stereochemistry of intermediates in thiamine catalysis. 2. Crystal structure of dl-2-(alpha-hydroxybenzyl)thiamine chloride hydrochloride trihydrate J. Am. Chem. Soc. 99 1977 1396 1403
-
(1977)
J. Am. Chem. Soc.
, vol.99
, pp. 1396-1403
-
-
Pletcher, J.1
Sax, M.2
Blank, G.3
Wood, M.4
-
8
-
-
0020000977
-
The amino group and steric factors in thiamin catalysis
-
A. Schellenberger The amino group and steric factors in thiamin catalysis Ann. N.Y. Acad. Sci. 378 1982 51 62
-
(1982)
Ann. N.Y. Acad. Sci.
, vol.378
, pp. 51-62
-
-
Schellenberger, A.1
-
9
-
-
0040730568
-
Crystal structure of thiamin thiazolone: A possible transition-state analogue with an intramolecular N-H⋯O hydrogen bond in the V form
-
W. Shin, and Y.C. Kim Crystal structure of thiamin thiazolone: a possible transition-state analogue with an intramolecular N-H⋯O hydrogen bond in the V form J. Am. Chem. Soc. 108 1986 7078 7082
-
(1986)
J. Am. Chem. Soc.
, vol.108
, pp. 7078-7082
-
-
Shin, W.1
Kim, Y.C.2
-
10
-
-
0037391206
-
Current mechanistic understanding of thiamin diphosphate-dependent enzymatic reactions
-
F. Jordan Current mechanistic understanding of thiamin diphosphate-dependent enzymatic reactions Nature Prod. Rep. 20 2003 184 201
-
(2003)
Nature Prod. Rep.
, vol.20
, pp. 184-201
-
-
Jordan, F.1
-
11
-
-
0032558425
-
Is a hydrophobic amino acid required to maintain the reactive V conformation of thiamin at the active center of thiamin diphosphate-requiring enzymes? Experimental and computational studies of isoleucine 415 of yeast pyruvate decarboxylase
-
F. Guo, D. Zhang, A. Kahyaoglu, R.S. Farid, and F. Jordan Is a hydrophobic amino acid required to maintain the reactive V conformation of thiamin at the active center of thiamin diphosphate-requiring enzymes? Experimental and computational studies of isoleucine 415 of yeast pyruvate decarboxylase Biochemistry 37 1998 13379 13391
-
(1998)
Biochemistry
, vol.37
, pp. 13379-13391
-
-
Guo, F.1
Zhang, D.2
Kahyaoglu, A.3
Farid, R.S.4
Jordan, F.5
-
12
-
-
0031793928
-
Iterated profile searches with PSI-BLAST - A tool for discovery in protein databases
-
S.F. Altschul, and E.V. Koonin Iterated profile searches with PSI-BLAST - a tool for discovery in protein databases Trends Biochem. Sci. 23 1998 444 447
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 444-447
-
-
Altschul, S.F.1
Koonin, E.V.2
-
13
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
L. Holm, and C. Sander Protein structure comparison by alignment of distance matrices J. Mol. Biol. 233 1993 123 138
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
14
-
-
0242330726
-
Application of 3D-Jury, GRDB, and Verify3D in fold recognition
-
M. von Grotthuss, J. Pas, L. Wyrwicz, K. Ginalski, and L. Rychlewski Application of 3D-Jury, GRDB, and Verify3D in fold recognition Proteins: Struct. Funct. Genet. 53 2003 418 423
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.53
, pp. 418-423
-
-
Von Grotthuss, M.1
Pas, J.2
Wyrwicz, L.3
Ginalski, K.4
Rychlewski, L.5
-
15
-
-
0242267511
-
Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment
-
K. Ginalski, and L. Rychlewski Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment Proteins: Struct. Funct. Genet. 53 2003 410 417
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.53
, pp. 410-417
-
-
Ginalski, K.1
Rychlewski, L.2
-
16
-
-
0038386050
-
3D-Jury: A simple approach to improve protein structure predictions
-
K. Ginalski, A. Elofsson, D. Fischer, and L. Rychlewski 3D-Jury: a simple approach to improve protein structure predictions Bioinformatics 19 2003 1015 1018
-
(2003)
Bioinformatics
, vol.19
, pp. 1015-1018
-
-
Ginalski, K.1
Elofsson, A.2
Fischer, D.3
Rychlewski, L.4
-
17
-
-
0043173988
-
Crystal structures of MTH1187 and its yeast ortholog YBL001c
-
X. Tao, R. Khayat, D. Christendat, A. Savchenko, X. Xu, and S. Goldsmith-Fischman Crystal structures of MTH1187 and its yeast ortholog YBL001c Proteins: Struct. Funct. Genet. 52 2003 478 480
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.52
, pp. 478-480
-
-
Tao, X.1
Khayat, R.2
Christendat, D.3
Savchenko, A.4
Xu, X.5
Goldsmith-Fischman, S.6
-
19
-
-
0037020177
-
A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes
-
T.J. Ettema, A.B. Brinkman, T.H. Tani, J.B. Rafferty, and J. Van Der Oost A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes J. Biol. Chem. 277 2002 37464 37468
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 37464-37468
-
-
Ettema, T.J.1
Brinkman, A.B.2
Tani, T.H.3
Rafferty, J.B.4
Van Der Oost, J.5
-
20
-
-
0032522653
-
Structure and control of pyridoxal phosphate dependent allosteric threonine deaminase
-
D.T. Gallagher, G.L. Gilliland, G. Xiao, J. Zondlo, K.E. Fisher, D. Chinchilla, and E. Eisenstein Structure and control of pyridoxal phosphate dependent allosteric threonine deaminase Structure 6 1998 465 475
-
(1998)
Structure
, vol.6
, pp. 465-475
-
-
Gallagher, D.T.1
Gilliland, G.L.2
Xiao, G.3
Zondlo, J.4
Fisher, K.E.5
Chinchilla, D.6
Eisenstein, E.7
-
21
-
-
0027918180
-
A thiamin diphosphate binding fold revealed by comparison of the crystal structures of transketolase, pyruvate oxidase and pyruvate decarboxylase
-
Y.A. Muller, Y. Lindqvist, W. Furey, G.E. Schulz, F. Jordan, and G. Schneider A thiamin diphosphate binding fold revealed by comparison of the crystal structures of transketolase, pyruvate oxidase and pyruvate decarboxylase Structure 1 1993 95 103
-
(1993)
Structure
, vol.1
, pp. 95-103
-
-
Muller, Y.A.1
Lindqvist, Y.2
Furey, W.3
Schulz, G.E.4
Jordan, F.5
Schneider, G.6
-
22
-
-
0141925483
-
Structure of apo, unactivated insulin-like growth factor-1 receptor kinase at 1.5 Å resolution
-
S. Munshi, D.L. Hall, M. Kornienko, P.L. Darke, and L.C. Kuo Structure of apo, unactivated insulin-like growth factor-1 receptor kinase at 1.5 Å resolution Acta Crystallog. sect. D 59 2003 1725 1730
-
(2003)
Acta Crystallog. Sect. D
, vol.59
, pp. 1725-1730
-
-
Munshi, S.1
Hall, D.L.2
Kornienko, M.3
Darke, P.L.4
Kuo, L.C.5
-
23
-
-
0036926615
-
A new vector for high-throughput, ligation-independent cloning encoding a tobacco etch virus protease cleavage site
-
L. Stols, M. Gu, L. Dieckman, R. Raffen, F.R. Collart, and M.I. Donnelley A new vector for high-throughput, ligation-independent cloning encoding a tobacco etch virus protease cleavage site Protein Expr. Purif. 25 2002 1 7
-
(2002)
Protein Expr. Purif.
, vol.25
, pp. 1-7
-
-
Stols, L.1
Gu, M.2
Dieckman, L.3
Raffen, R.4
Collart, F.R.5
Donnelley, M.I.6
-
24
-
-
0036922069
-
High throughput methods for gene cloning and expression
-
L. Dieckman, M. Gu, L. Stols, M.I. Donnelley, and F.R. Collart High throughput methods for gene cloning and expression Protein Expr. Purif. 25 2002 8 15
-
(2002)
Protein Expr. Purif.
, vol.25
, pp. 8-15
-
-
Dieckman, L.1
Gu, M.2
Stols, L.3
Donnelley, M.I.4
Collart, F.R.5
-
25
-
-
0033151873
-
Taking MAD to the extreme: Ultrafast protein structure determination
-
M.A. Walsh, I. Dementieva, G. Evans, R. Sanishvili, and A. Joachimiak Taking MAD to the extreme: ultrafast protein structure determination Acta Crystallog. sect. D 55 1999 1168 1173
-
(1999)
Acta Crystallog. Sect. D
, vol.55
, pp. 1168-1173
-
-
Walsh, M.A.1
Dementieva, I.2
Evans, G.3
Sanishvili, R.4
Joachimiak, A.5
-
26
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews, B. (1968). Solvent content of protein crystals. J. Mol. Biol. 33, 491-497.
-
(1968)
J. Mol. Biol.
, vol.33
, pp. 491-497
-
-
Matthews, B.1
-
27
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. & Minor, W. (1997). Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
29
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
CCP4
-
CCP4 The CCP4 suite: programs for protein crystallography Acta Crystallog. sect. D 50 1994 760 763
-
(1994)
Acta Crystallog. Sect. D
, vol.50
, pp. 760-763
-
-
-
30
-
-
0032128419
-
Miscellaneous algorithms for density modification
-
K. Cowtan, and P. Main Miscellaneous algorithms for density modification Acta Crystallog. sect D 54 1998 487 493
-
(1998)
Acta Crystallog. Sect D
, vol.54
, pp. 487-493
-
-
Cowtan, K.1
Main, P.2
-
31
-
-
0032964481
-
Automated protein model building combined with iterative structure refinement
-
A. Perrakis, R. Morris, and V.S. Lamzin Automated protein model building combined with iterative structure refinement Nature Struct. Biol. 6 1999 458 463
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 458-463
-
-
Perrakis, A.1
Morris, R.2
Lamzin, V.S.3
-
32
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
G.N. Murshudov, A.A. Vagin, and E.J. Dodson Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallog. sect. D 53 1997 240 255
-
(1997)
Acta Crystallog. Sect. D
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
|