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Volumn 167, Issue 4, 2004, Pages 1585-1595

The high-mobility group A-type protein CarD of the bacterium Myxococcus xanthus as a transcription factor for several distinct vegetative genes

Author keywords

[No Author keywords available]

Indexed keywords

BETA GALACTOSIDASE; CAROTENOID; GENE PRODUCT; HIGH MOBILITY GROUP A PROTEIN; PROTEIN; PROTEIN CARD; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 4644273704     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.104.029207     Document Type: Article
Times cited : (20)

References (47)
  • 1
    • 0032190230 scopus 로고    scopus 로고
    • AT-hook motifs identified in a wide variety of DNA binding proteins
    • ARAVIND, L., and D. LANDSMAN, 1998 AT-hook motifs identified in a wide variety of DNA binding proteins. Nucleic Acids Res. 26: 4413-4421.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 4413-4421
    • Aravind, L.1    Landsman, D.2
  • 2
    • 0020607566 scopus 로고
    • In situ transposon replacement and isolation of a spontaneous tandem genetic duplication
    • AVERY, L., and D. KAISER, 1983 In situ transposon replacement and isolation of a spontaneous tandem genetic duplication. Mol. Gen. Genet. 191: 99-109.
    • (1983) Mol. Gen. Genet. , vol.191 , pp. 99-109
    • Avery, L.1    Kaiser, D.2
  • 3
    • 0031001394 scopus 로고    scopus 로고
    • An HMG I/Y-containing represser complex and supercoiled DNA topology are critical for long-range enhancer-dependent transcription in vitro
    • BAGGA, R., and M. EMERSON, 1997 An HMG I/Y-containing represser complex and supercoiled DNA topology are critical for long-range enhancer-dependent transcription in vitro. Genes Dev. 11: 629-639.
    • (1997) Genes Dev. , vol.11 , pp. 629-639
    • Bagga, R.1    Emerson, M.2
  • 5
    • 0021710537 scopus 로고
    • The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein coding regions
    • BIBB, M. J., P. R. FINDLAY and M. W. JOHNSON, 1984 The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein coding regions. Gene 30: 157-166.
    • (1984) Gene , vol.30 , pp. 157-166
    • Bibb, M.J.1    Findlay, P.R.2    Johnson, M.W.3
  • 6
    • 0017855939 scopus 로고
    • Nutrition of Myxococcus xanthus, a fruiting myxobacterium
    • BRETSCHER, A. P., and D. KAISER, 1978 Nutrition of Myxococcus xanthus, a fruiting myxobacterium. J. Bacteriol. 133: 763-768.
    • (1978) J. Bacteriol. , vol.133 , pp. 763-768
    • Bretscher, A.P.1    Kaiser, D.2
  • 7
    • 0032814140 scopus 로고    scopus 로고
    • Regulation of DNA-dependent activities by the functional motifs of the high mobility group chromosomal proteins
    • BUSTIN, M., 1999 Regulation of DNA-dependent activities by the functional motifs of the high mobility group chromosomal proteins. Mol. Cell. Biol. 19: 5237-5246.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 5237-5246
    • Bustin, M.1
  • 8
    • 0035282078 scopus 로고    scopus 로고
    • Revised nomenclature for high mobility group (HMG) chromosomal proteins
    • BUSTIN, M., 2001 Revised nomenclature for high mobility group (HMG) chromosomal proteins. Trends Biochem. Sci. 26 (3): 152-153.
    • (2001) Trends Biochem. Sci. , vol.26 , Issue.3 , pp. 152-153
    • Bustin, M.1
  • 9
    • 0017800428 scopus 로고
    • Isolation of bacteriophage Mx4, a generalized transducing phage for Myxococcus xanthus
    • CAMPOS, J. M., J. GEISSELSODER and D. R. ZUSMAN, 1978 Isolation of bacteriophage Mx4, a generalized transducing phage for Myxococcus xanthus. J. Mol. Biol. 119: 167-178.
    • (1978) J. Mol. Biol. , vol.119 , pp. 167-178
    • Campos, J.M.1    Geisselsoder, J.2    Zusman, D.R.3
  • 10
    • 0018956590 scopus 로고
    • Analysis of gene control signals by DNA fusion and cloning in E. coli
    • CASADABAN, M. J., and S. N. COHEN, 1980 Analysis of gene control signals by DNA fusion and cloning in E. coli. J. Mol. Biol. 138: 179-207.
    • (1980) J. Mol. Biol. , vol.138 , pp. 179-207
    • Casadaban, M.J.1    Cohen, S.N.2
  • 11
    • 0037610124 scopus 로고    scopus 로고
    • The Stigmatella aurantiaca homolog Myxococcus xanthus high-mobility-group A-type transcription factor CarD: Insights into the functional modules of CarD and their distribution in bacteria
    • CAYUELA, M. L., M. ELÍAS-ARNANZ, M. PEÑALVER-MELLADO, S. PADMANABHAN and F. J. MURILLO, 2003 The Stigmatella aurantiaca homolog Myxococcus xanthus high-mobility-group A-type transcription factor CarD: insights into the functional modules of CarD and their distribution in bacteria. J. Bacteriol. 185: 3527-3537.
    • (2003) J. Bacteriol. , vol.185 , pp. 3527-3537
    • Cayuela, M.L.1    Elías-Arnanz, M.2    Peñalver-Mellado, M.3    Padmanabhan, S.4    Murillo, F.J.5
  • 12
    • 0034660619 scopus 로고    scopus 로고
    • Sigma factor selectivity of Escherichia coli RNA polymerase: Role for CRP, IHF and Lrp transcription factors
    • COLLAND, F., M. BARTH, R. HENGGE-ARONIS and A. KOLB, 2000 Sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and Lrp transcription factors. EMBO J. 19: 3028-3037.
    • (2000) EMBO J. , vol.19 , pp. 3028-3037
    • Colland, F.1    Barth, M.2    Hengge-Aronis, R.3    Kolb, A.4
  • 13
    • 0029980554 scopus 로고    scopus 로고
    • Recent advances in the social and developmental biology of Myxobacteria
    • DWORKIN, M., 1996 Recent advances in the social and developmental biology of Myxobacteria. Microbiol. Rev. 60: 70-102.
    • (1996) Microbiol. Rev. , vol.60 , pp. 70-102
    • Dworkin, M.1
  • 14
    • 0029619641 scopus 로고
    • Reversal of intrinsic DNA bends on the INFB gene enhancer by transcription factors and the architectural protein HMGI(Y)
    • FALVO. J. V., D. THANOS and T. MANIATIS, 1995 Reversal of intrinsic DNA bends on the INFB gene enhancer by transcription factors and the architectural protein HMGI(Y). Cell 83: 1101-1111.
    • (1995) Cell , vol.83 , pp. 1101-1111
    • Falvo, J.V.1    Thanos, D.2    Maniatis, T.3
  • 15
    • 0027530314 scopus 로고
    • Growth phase dependence of the activation of a bacterial gene for carotenoid synthesis by blue light
    • FONTES, M., R. M. Ruiz-VÁZQUEZ and F. J. MURILLO, 1993 Growth phase dependence of the activation of a bacterial gene for carotenoid synthesis by blue light. EMBO J. 12: 1265-1275.
    • (1993) EMBO J. , vol.12 , pp. 1265-1275
    • Fontes, M.1    Ruiz-Vázquez, R.M.2    Murillo, F.J.3
  • 16
    • 0037238704 scopus 로고    scopus 로고
    • A novel regulatory gene for light-induced carotenoid synthesis in the bacterium Myxococcus xanthus
    • FONTES, M., L. GALBIS-MARTÍNEZ and F. J. MURILLO, 2003 A novel regulatory gene for light-induced carotenoid synthesis in the bacterium Myxococcus xanthus. Mol. Microbiol. 47: 561-571.
    • (2003) Mol. Microbiol. , vol.47 , pp. 561-571
    • Fontes, M.1    Galbis-Martínez, L.2    Murillo, F.J.3
  • 17
    • 0024110544 scopus 로고
    • Genetic identification and cloning of a gene required for developmental cell interactions in Myxococcus xanthus
    • GILL, R. E., M. G. CULL and S. FLY, 1988 Genetic identification and cloning of a gene required for developmental cell interactions in Myxococcus xanthus. J. Bacteriol. 170: 5279-5288.
    • (1988) J. Bacteriol. , vol.170 , pp. 5279-5288
    • Gill, R.E.1    Cull, M.G.2    Fly, S.3
  • 18
    • 0030065962 scopus 로고    scopus 로고
    • Light-induced carotenogenesis in Myxococcus xanthus: Light-dependent membrane sequestration of ECF sigma factor CarQ by anti-sigma factor CarR
    • GORHAM, H. C., S. J. McGOWAN, P. ROBSON and D. A. HODGSON, 1996 Light-induced carotenogenesis in Myxococcus xanthus: light-dependent membrane sequestration of ECF sigma factor CarQ by anti-sigma factor CarR. Mol. Microbiol. 19: 171-186.
    • (1996) Mol. Microbiol. , vol.19 , pp. 171-186
    • Gorham, H.C.1    McGowan, S.J.2    Robson, P.3    Hodgson, D.A.4
  • 19
    • 0027516676 scopus 로고
    • Light-induced carotenogenesis in Myxococcus xanthus: Genetic analysis of the carR region
    • HODGSON, D. A., 1993 Light-induced carotenogenesis in Myxococcus xanthus: genetic analysis of the carR region. Mol. Microbiol. 7: 471-488.
    • (1993) Mol. Microbiol. , vol.7 , pp. 471-488
    • Hodgson, D.A.1
  • 20
    • 0002426942 scopus 로고    scopus 로고
    • Light regulation of carotenoid synthesis in Myxococcus xanthus
    • edited by M. X. Caddick, S. Baumber, D. A. Hodgson and M. K. Phillips-Jones. Cambridge University Press, Cambridge, UK
    • HODGSON, D. A., and A. E. BERRY, 1998 Light regulation of carotenoid synthesis in Myxococcus xanthus, pp. 186-211 in Microbial Responses to Light and Time, edited by M. X. CADDICK, S. BAUMBER, D. A. HODGSON and M. K. PHILLIPS-JONES. Cambridge University Press, Cambridge, UK.
    • (1998) Microbial Responses to Light and Time , pp. 186-211
    • Hodgson, D.A.1    Berry, A.E.2
  • 21
    • 0033515434 scopus 로고    scopus 로고
    • Alignment and structure prediction of divergent protein families: Periplasmic and outer membrane proteins of bacterial efflux pumps
    • JOHNSON, J. M., and G. M. CHURCH, 1999 Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps. J. Mol. Biol. 287: 695-715.
    • (1999) J. Mol. Biol. , vol.287 , pp. 695-715
    • Johnson, J.M.1    Church, G.M.2
  • 22
    • 0018536781 scopus 로고
    • Social gliding is correlated with the presence of pili in Myxococcus xanthus
    • KAISER, D., 1979 Social gliding is correlated with the presence of pili in Myxococcus xanthus. Proc. Natl. Acad. Sci. USA 76: 5952-5956.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5952-5956
    • Kaiser, D.1
  • 23
    • 0003015710 scopus 로고
    • Intercellular signaling
    • edited by M. Dworkin and D. Kaiser. American Society for Microbiology, Washington, DC
    • KAISER, D., and L. KROOS, 1993 Intercellular signaling, pp. 257-283 in Myxobacteria II, edited by M. DWORKIN and D. KAISER. American Society for Microbiology, Washington, DC.
    • (1993) Myxobacteria II , pp. 257-283
    • Kaiser, D.1    Kroos, L.2
  • 24
    • 0027273758 scopus 로고
    • How and why bacteria talk to each other
    • KAISER, D., and R. LOSICK, 1993 How and why bacteria talk to each other. Cell 73: 873-885.
    • (1993) Cell , vol.73 , pp. 873-885
    • Kaiser, D.1    Losick, R.2
  • 26
    • 0021221420 scopus 로고
    • Construction of Tn5-lac, a transposon that fuses lad expression to exogenous promoters, and its introduction into Myxococcus xanthus
    • KROOS, L., and D. KAISER, 1984 Construction of Tn5-lac, a transposon that fuses lad expression to exogenous promoters, and its introduction into Myxococcus xanthus. Proc. Natl. Acad. Sci. USA 81: 5816-5820.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 5816-5820
    • Kroos, L.1    Kaiser, D.2
  • 27
    • 0028953815 scopus 로고
    • The eubacterial transcriptional activator Lrp is present in the archaeon Pyrococcus furiosus
    • KYRPIDES, N. C., and C. A. OUZOUNIS, 1995 The eubacterial transcriptional activator Lrp is present in the archaeon Pyrococcus furiosus. Trends Biochem. Sci. 20: 140-141.
    • (1995) Trends Biochem. Sci. , vol.20 , pp. 140-141
    • Kyrpides, N.C.1    Ouzounis, C.A.2
  • 29
    • 0028018104 scopus 로고
    • Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions
    • LONETTO, M. A., K. L. BROWN, K. E. RUDD and M. J. BUTTER, 1994 Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions. Proc. Natl. Acad. Sci. USA 91: 7573-7577.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 7573-7577
    • Lonetto, M.A.1    Brown, K.L.2    Rudd, K.E.3    Butter, M.J.4
  • 30
    • 0031735868 scopus 로고    scopus 로고
    • The structure of an ECF-sigma-dependent, light-inducible promoter from the bacterium Myxococcus xanthus
    • MARTÍNEZ-ARGUDO, I., R. M. RUIZ-VÁZQUEZ and F. J. MURILLO, 1998 The structure of an ECF-sigma-dependent, light-inducible promoter from the bacterium Myxococcus xanthus. Mol. Microbiol. 30: 883-893.
    • (1998) Mol. Microbiol. , vol.30 , pp. 883-893
    • Martínez-Argudo, I.1    Ruiz-Vázquez, R.M.2    Murillo, F.J.3
  • 31
    • 0344491055 scopus 로고
    • Genetic and allelic interactions in the carotenogenic response of Myxococcus xanthus to blue light
    • MARTÍNEZ-LABORDA, A., and F. J. MURILLO, 1989 Genetic and allelic interactions in the carotenogenic response of Myxococcus xanthus to blue light. Genetics 122: 481-490.
    • (1989) Genetics , vol.122 , pp. 481-490
    • Martínez-Laborda, A.1    Murillo, F.J.2
  • 32
    • 0027440059 scopus 로고
    • Light-induced carotenogenesis in Myxococcus xanthus. DNA sequence analysis of the carR region
    • McGOWAN, S. J., H. C. GORHAM and D. A. HODGSON, 1993 Light-induced carotenogenesis in Myxococcus xanthus. DNA sequence analysis of the carR region. Mol. Microbiol. 10: 713-735.
    • (1993) Mol. Microbiol. , vol.10 , pp. 713-735
    • McGowan, S.J.1    Gorham, H.C.2    Hodgson, D.A.3
  • 33
    • 0031803840 scopus 로고    scopus 로고
    • TonB-dependent iron acquisition: Mechanisms of siderophore-mediated active transport
    • MOECK, G. S., and J. W. COULTON, 1998 TonB-dependent iron acquisition: mechanisms of siderophore-mediated active transport. Mol. Microbiol. 28: 675-681.
    • (1998) Mol. Microbiol. , vol.28 , pp. 675-681
    • Moeck, G.S.1    Coulton, J.W.2
  • 34
    • 0035153902 scopus 로고    scopus 로고
    • ihfA gene of the bacterium Myxococcus xanthus and its role in activation of carotenoid genes by blue light
    • MORENO, A. J., M. FONTES and F. J. MURILLO, 2001 ihfA gene of the bacterium Myxococcus xanthus and its role in activation of carotenoid genes by blue light. J. Bacteriol. 183: 557-569.
    • (2001) J. Bacteriol. , vol.183 , pp. 557-569
    • Moreno, A.J.1    Fontes, M.2    Murillo, F.J.3
  • 35
    • 0002480960 scopus 로고    scopus 로고
    • The E. COA HU and IHF proteins: Accessory factors for complex protein-DNA assemblies
    • edited by E. C. C. Lin and A. S. Lynch. Landes, Austin, TX
    • NASH, H. A., 1996 The E. COA HU and IHF proteins: accessory factors for complex protein-DNA assemblies, pp. 149-166 in Regulation of Gene Expression in Escherichia coli, edited by E. C. C. LIN and A. S. LYNCH. Landes, Austin, TX.
    • (1996) Regulation of Gene Expression in Escherichia Coli , pp. 149-166
    • Nash, H.A.1
  • 36
    • 0028835104 scopus 로고
    • Leucine-responsive regulatory protein: A global regulator of gene expression in E. coli
    • NEWMAN, E. B., and R. LIN, 1995 Leucine-responsive regulatory protein: a global regulator of gene expression in E. coli. Annu. Rev. Microbiol. 49: 747-775.
    • (1995) Annu. Rev. Microbiol. , vol.49 , pp. 747-775
    • Newman, E.B.1    Lin, R.2
  • 37
    • 0028138867 scopus 로고
    • A genetic link between light response and multicellular development in the bacterium Myxococcus xanthus
    • NICOLÁS, F. J., R. M. RUIZ-VÁZQUEZ and F. J. MURILLO, 1994 A genetic link between light response and multicellular development in the bacterium Myxococcus xanthus. Genes Dev. 8: 2375-2387.
    • (1994) Genes Dev. , vol.8 , pp. 2375-2387
    • Nicolás, F.J.1    Ruiz-Vázquez, R.M.2    Murillo, F.J.3
  • 39
    • 0031948133 scopus 로고    scopus 로고
    • Antibiotic resistance caused by gram-negative multidrug efflux pumps
    • NIKAIDO, H., 1998 Antibiotic resistance caused by gram-negative multidrug efflux pumps. Clin. Infect. Dis. 27: S32-S41.
    • (1998) Clin. Infect. Dis. , vol.27
    • Nikaido, H.1
  • 40
    • 0021073779 scopus 로고
    • Construction of improved M1 3 vectors using oligodeoxynucleotide-directed mutagenesis
    • NORRANDER, J., T. TEMPE and J. MESSING, 1983 Construction of improved M1 3 vectors using oligodeoxynucleotide-directed mutagenesis. Gene 26: 101-106.
    • (1983) Gene , vol.26 , pp. 101-106
    • Norrander, J.1    Tempe, T.2    Messing, J.3
  • 41
    • 0035834766 scopus 로고    scopus 로고
    • Domain architecture of a high mobility group A-type bacterial transcriptional factor
    • PADMANABHAN, S., M. ELÍAS-ARNANZ, E. CARPIO, P. APARICIO and F. J. MURILLO, 2001 Domain architecture of a high mobility group A-type bacterial transcriptional factor. J. Biol. Chem. 276: 41566-41575.
    • (2001) J. Biol. Chem. , vol.276 , pp. 41566-41575
    • Padmanabhan, S.1    Elías-Arnanz, M.2    Carpio, E.3    Aparicio, P.4    Murillo, F.J.5
  • 42
    • 0025196283 scopus 로고
    • The AT-DNA binding domain of mammalian high mobility group I chromosomal protein. A novel peptide motif for recognizing DNA structure
    • REEVES, R., and M. S. NISSEN, 1990 The AT-DNA binding domain of mammalian high mobility group I chromosomal protein. A novel peptide motif for recognizing DNA structure. J. Biol. Chem. 265: 8573-8582.
    • (1990) J. Biol. Chem. , vol.265 , pp. 8573-8582
    • Reeves, R.1    Nissen, M.S.2
  • 43
    • 0021721993 scopus 로고
    • Abnormal motility and fruiting behavior of Myxococcus xanthus bacteriophage-resistant strains induced by a clear plaque mutant of bacteriophage Mx8
    • RUIZ-VÁZQUEZ, R. M., and F. J. MURILLO, 1984 Abnormal motility and fruiting behavior of Myxococcus xanthus bacteriophage-resistant strains induced by a clear plaque mutant of bacteriophage Mx8. J. Bacteriol. 160: 818-821.
    • (1984) J. Bacteriol. , vol.160 , pp. 818-821
    • Ruiz-Vázquez, R.M.1    Murillo, F.J.2
  • 45
    • 0024284551 scopus 로고
    • Lambda ZAP: A bacteriophage lambda expression vector with in vivo excision properties
    • SHORT, J. M., J. M. FERNANDEZ, J. A. SORGE and W. D. HUSE, 1988 Lambda ZAP: a bacteriophage lambda expression vector with in vivo excision properties. Nucleic Acids Res. 16: 7583-7600.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 7583-7600
    • Short, J.M.1    Fernandez, J.M.2    Sorge, J.A.3    Huse, W.D.4
  • 46
    • 0030998258 scopus 로고    scopus 로고
    • Intra- and intermolecular cooperative binding of high-mobility-group protein 1(Y) to the beta-interferon promoter
    • YIE, J., S. LIANG, M. MERIKA and D. THANOS, 1997 Intra- and intermolecular cooperative binding of high-mobility-group protein 1(Y) to the beta-interferon promoter. Mol. Cell. Biol. 17: 3649-3662.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 3649-3662
    • Yie, J.1    Liang, S.2    Merika, M.3    Thanos, D.4
  • 47
    • 0032901093 scopus 로고    scopus 로고
    • The Myxococcus xanthus pilQ (sglA) gene encodes a secretin homolog required for type IV pilus biogenesis, social motility and development
    • WALL, D., P. KOLENBRANDER and D. KAISER, 1998 The Myxococcus xanthus pilQ (sglA) gene encodes a secretin homolog required for type IV pilus biogenesis, social motility and development. J. Bacteriol. 181: 24-33.
    • (1998) J. Bacteriol. , vol.181 , pp. 24-33
    • Wall, D.1    Kolenbrander, P.2    Kaiser, D.3


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