Domain Architecture of a High Mobility Group A-type Bacterial Transcriptional Factor

Journal of Biological Chemistry

Volumn 276, Issue 45, 2001, Pages 41566-41575

  Padmanabhan, S ^a   Elías Arnanz, Montserrat ^a   Carpio, Emilio ^a   Aparicio, Pedro ^a   Murillo, Francisco Jose ^a  

^a UNIVERSITY OF MURCIA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; DNA; PROTEINS;

STRUCTURAL STABILITY;

BIOCHEMISTRY;

DNA; HIGH MOBILITY GROUP A PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR CARD; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; CARD PROTEIN, MYXOCOCCUS XANTHUS; CASEIN KINASE II; PROTEIN SERINE THREONINE KINASE; TRANSACTIVATOR PROTEIN;

AMINO TERMINAL SEQUENCE; ARTICLE; BINDING AFFINITY; CHROMATIN STRUCTURE; DNA BINDING; MYXOCOCCUS XANTHUS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN PHOSPHORYLATION; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; AMINO ACID SEQUENCE; ANIMAL; CHEMISTRY; DIMERIZATION; HUMAN; METABOLISM; MOLECULAR GENETICS; MOLECULAR WEIGHT; MOUSE; PHOSPHORYLATION; PHYSIOLOGY; RABBIT;

BACTERIA (MICROORGANISMS); EUKARYOTA; MYXOCOCCUS XANTHUS; PROKARYOTA;

AMINO ACID SEQUENCE; ANIMALS; BACTERIAL PROTEINS; CASEIN KINASE II; DIMERIZATION; DNA; HMGA PROTEINS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PHOSPHORYLATION; PROTEIN-SERINE-THREONINE KINASES; RABBITS; TRANS-ACTIVATORS;

EID: 0035834766     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M106352200     Document Type: Article

References (70)

1. Shore, D., and Baldwin, R. L. (1983) J. Mol. Biol. 170, 957-981
2. Werner, M. H., and Burley, S. K. (1997) Cell 88, 733-736
3. Elías-Arnanz, M., and Salas, M. (1999) Genes Dev. 13, 2502-2513
4. Grosschedl, R. K., Giese, K., and Pagel, J. (1994) Trends Genet. 10, 94-100
5. Bustin, M., and Reeves, R. (1996) Prog. Nucleic Acids Res. Mol. Biol. 54, 35-100
6. Bustin, M. (1999) Mol. Cell. Biol. 19, 5237-5246
7. Bustin, M. (2001) Trends Biochem. Sci. 26, 152-153
8. Aravind, L., and Landsman, D. (1998) Nucleic Acids Res. 26, 4413-4421
9. Bustin, M., Lehn, D. A., and Landsman, D. (1990) Biochim. Biophys. Acta 1049, 231-243
10. Solomon, M. J., Strauss, F., and Varshavsky, A. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 1276-1280
11. Maher, J. F., and Nathans, D. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 6716-6720
12. Huth, J. R., Bewley, C. A., Nissen, M. S., Evans, J. N. S., Reeves, R., Gronenborn, A. M., and Clore, G. M. (1997) Nat. Struct. Biol. 4, 657-665
13. Yie, J., Liang, S., Merika, M., and Thanos, D. (1997) Mol. Cell. Biol. 17, 3649-3662
14. Palvimo, J., and Linnala-Kankkunen, A. (1989) FEBS Lett. 257, 101-104
15. Ferranti, P., Malorni, A., Marino, G., Pucci, P., Goodwin, G. H., Manfioletti, G., and Giancotti, V. (1995) J. Biol. Chem. 267, 22486-22489
16. Reeves, R., Langan, T. A., and Nissen, M. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 1671-1675
17. Wang, D.-Z., Ray, P., and Boothby, M. (1995) J. Biol. Chem. 270, 22924-22932
18. Schwanbeck, R., Gymnopoulos, M., Petry, I., Piekielko, A., Szewczuk, Z., Heyduk, T., Zechel, K., and Wisniewski, J. R. (2001) J. Biol. Chem. 276, 26012-26021
19. Nicolás, F. J., Cayuela, M. L., Martínez-Argudo, I. M., Ruiz-Vázquez, R. M., and Murillo, F. J. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 6881-6885
20. Nicolás, F. J., Ruiz-Vázquez, R. M., and Murillo, F. J. (1994) Genes Dev. 8, 2375-2387
21. Hodgson, D. A., and Murillo, F. J. (1993) Myxobacteria II (Dworkin, M., and Kaiser, D., eds) pp. 157-181, American Society for Microbiology, Washington, D. C.
22. Kaiser, D. (1984) in Microbial Development (Losick, R., and Shapiro, L., eds) pp. 197-218, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
23. Jain, R., and Inouye, S. (1998) J. Bacteriol. 180, 6544-6550
24. Treuner-Lange, A., Ward, M. J., and Zusman, D. R. (2001) Mol. Microbiol. 40, 126-140
25. Studier, F. W., Rosenberg, A. H., Dunn, J. J., and Dubendorff, J. W. (1990) Methods Enzymol. 185, 60-89
26. Thanos, D., and Maniatis, T. (1992) Cell 71, 777-789
27. Laemmli, U. K. (1970) Nature 227, 680-685
28. Pace, C. N., Vajdos, F., Fee, L., Grimsley, G., and Gray, T. (1995) Protein Sci. 4, 2411-2423
29. Scopes, R. K. (1974) Anal. Biochem. 59, 277-282
30. Reeves, R., and Nissen, M. S. (1991) J. Biol. Chem. 265, 8573-8582
31. Ausubel, F. M., Brent, R., Kingston, R., Seidman, J. G., Smith, J. A., and Struhl, K. (1995) in Current Protocols in Molecular Biology, Supplement 13, pp. 2.4.1-2.4.9, Wiley, New York
32. Ortiz, M. L., Calero, M., Patron, C. F., Castellanos, L., and Mendez, E. (1992) FEBS Lett. 296, 300-304
33. Cohen, S. L., and Chait, B. T., (1997) Anal. Biochem. 247, 257-267
34. Strzelecka-Golaszewska, H., Moraczewska, J., Khaitlina, S. Y., and Mossakowska, M. (1993) Eur. J. Biochem. 211, 731-742
35. Potschka, M. (1987) Anal. Biochem. 162, 47-64
36. Ackers, G. (1970) Adv. Protein Chem. 24, 343-446
37. Brown, K. C., Yang, S.-H., and Kodadek, T. (1995) Biochemistry 34, 4733-4739
38. Minton, A. P. (1994) in Modern Analytical Ultracentrifugation (Schuster, T. M., and Laue, T. M., eds) pp. 81-93, Birkhauser, Boston, MA
39. Hansen, J. C., Lebowitz, J., and Demeler, B. (1994) Biochemistry 33, 13155-13163
40. Laue, T. M., Shak, B. D., Ridgeway, T. M., and Pelletier, S. L. (1992) Analytical Ultracentrifugation in Biochemistry and Polymer Science, (Harding, S. E., Rowe, A. J., and Horton, J. C., eds) pp. 90-125, Royal Society of Chemistry, Cambridge, United Kingdom
41. Carey, J. (2000) Methods Enzymol. 328, 499-514
42. Parsell, D. A., and Sauer, R. T. (1989) J. Biol. Chem. 264, 7590-7595
43. Tobias, J. W., Shrader, T. E., Rocap, G., and Varshavsky, A. (1991) Science 254, 1374-1377
44. Claus, P., Schulze, E., and Wisniewski, J. R. (1994) J. Biol. Chem. 269, 33042-33048
45. Hirel, P.-H., Schmitter, J.-M., Dessen, P., Fayat, G., and Blanquet, S. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 8247-8251
46. Du, W., Thanos, D., and Maniatis, T. (1993) Cell 74, 887-898
47. Yie, J., Merika, M., Munshi, N., Chen, G., and Thanos, D. (1997) EMBO J. 18, 3074-3089
48. Corbett, R. J. T., and Roche, R. S. (1984) Biochemistry 23, 1888-1894
49. Nozaki, Y., Schechter, N. M., Reynolds, J. A., and Tanford, C. (1976) Biochemistry 15, 3884-3889
50. Siegel, L. M., and Monty, K. J. (1966) Biochim. Biophys. Acta 112, 346-362
51. Westwood, J. T., and Wu, C. (1993) Mol. Cell. Biol. 13, 3481-3486
52. Schmid, F. X. (1997) in Protein Structure: A Practical Approach (Creighton, T. E., ed) pp. 261-297, Oxford University Press, Oxford, United Kingdom
53. Johnson, W. C., Jr. (1990) Proteins Struct. Func. Genet. 7, 205-214
54. Rost, B., and Sander, C. (1993) J. Mol. Biol. 232, 584-599
55. Spolar, R. S., and Record, M. T., Jr. (1994) Science 263, 777-784
56. Zhang, X. M., and Verdine, G. L. (1999) J. Biol. Chem. 274, 20235-20243
57. Baldwin, R. L., and Rose, G. D. (1999) Trends Biochem. Sci. 24, 26-33
58. Serrano, L. (2000) Adv. Protein Chem. 53, 49-85
59. Bowie, J. U., Reidhaar-Olson, J. F., Lim, W. A., and Sauer, R. T. (1990) Science 247, 1306-1310
60. Rechsteiner, M., and Rogers, S. W. (1996) Trends Biochem. Sci. 21, 267-271
61. Wright, P. E., and Dyson, H. J. (1999) J. Mol. Biol. 293, 321-331
62. Merika, M., and Thanos, D. (2001) Curr. Opin. Gen. Dev. 11, 205-208
63. Selby, C. P., and Sancar, A. (1995) J. Biol. Chem. 270, 4882-4889
64. Cayuela, M. L. (1999) Caracterización de Car D, un factor transcripcional de la bacteria Myxococcus xanthus. Ph.D. thesis, pp. 86-88, Universidad de Murcia, Spain
65. Selby, C. P., and Sancar, A. (1993) Science 260, 53-58
66. Ayora, S., Rojo, F., Ogasawara, N., Nakai, S., and Alonso, J. C. (1996) J. Mol. Biol. 256, 301-318
67. Hodgson, D. A. (1993) Mol. Microbiol. 7, 471-488
68. McGowan, S. J., Gorham, H. C., and Hodgson, D. A. (1993) Mol. Microbiol. 10, 713-735
69. Lonetto, M., Brown, K., Rudd, K., and Buttner, L. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 7573-7577
70. Mesbah, M., Premachandran, U., and Whitman, W. B. (1989) Int. J. Syst. Bacteriol. 39, 159-167