Codon usage in prokaryotes

Biotechnology and Biotechnological Equipment

Volumn 22, Issue 2, 2008, Pages 669-682

  Bachvarov, B ^a   Kirilov, K ^a   Ivanov, I ^a  

^a INSTITUTE OF MOLECULAR BIOLOGY   (Bulgaria)

Author keywords

Codon usage; Codon usage in prokaryotes; Preferential codons; Prokaryotic genomes; Prokaryotic taxonomy; Rare codons

Indexed keywords

BACTERIA (MICROORGANISMS); PROKARYOTA;

EID: 46349102622     PISSN: 13102818     EISSN: None     Source Type: Journal    
DOI: 10.1080/13102818.2008.10817533     Document Type: Article

References (9)

1. Binnewies T.T., Motro Y., Hallin P.F., Lund O., Dunn D., La T., Hampson D.J., Bellgard M., Wassenaar T.M., and Ussery D.W., (2006) Funct. Integr. Genomics, 6 165–185.
2. Field D., Wilson G., and van der Gast. C., (2006) Curr. Opin. Microbiol., 9 499–504.
3. Grantham R., Gautier C., Gouy M., Jacobzone M., and Mercier R., (1981) Nucleic Acids Res., 9 43–74.
4. Grantham R., Gautier C., Gouy M., Mercier R., and Pave A., (1980) Nucleic Acids Res., 8 49–62.
5. Karlin S., Mrazek J., Campbell A., and Kaiser D., (2001) J. Bacteriol., 183 5025–5040.
6. Karlin S., Mrazek J., and Campbell A.M., (1998) Mol. Microbiol., 29 1341–1355.
7. Kozak M., (1997) EMBO J., 16 2482–2492.
8. Kozak M., (1999) Gene, 234 187–208.
9. Shendure J., Porreca G.J., Reppas N.B., Lin X., McCutcheon J.P., Rosenbaum A.M., Wang M.D., Zhang K., Mitra R.D., and Church G.M., (2005) Science, 309 1728–1732.