-
1
-
-
25444442089
-
Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset
-
Adkins,R.M. (2004) Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset. BMC Genet., 5, 22.
-
(2004)
BMC Genet
, vol.5
, pp. 22
-
-
Adkins, R.M.1
-
2
-
-
0035058585
-
Haplotypes vs single marker linkage disequilibrium tests: What do we gain?
-
Akey,J. et al. (2001) Haplotypes vs single marker linkage disequilibrium tests: What do we gain? Eur. J. Hum. Genet., 9 291-300.
-
(2001)
Eur. J. Hum. Genet
, vol.9
, pp. 291-300
-
-
Akey, J.1
-
3
-
-
0348226177
-
The haplotyping problem: An overview of computational models and solutions
-
Bonizzoni,P. et al. (2003) The haplotyping problem: An overview of computational models and solutions. J. Comp. Sci. Technol., 18 675-688.
-
(2003)
J. Comp. Sci. Technol
, vol.18
, pp. 675-688
-
-
Bonizzoni, P.1
-
4
-
-
34147136617
-
Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data
-
Carvalho,B. et al. (2007) Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data. Biostatistics 8, 485-499.
-
(2007)
Biostatistics
, vol.8
, pp. 485-499
-
-
Carvalho, B.1
-
5
-
-
4544326903
-
Opportunities for combinatorial optimization in computational biology
-
Greenberg,H.J. et al. (2004) Opportunities for combinatorial optimization in computational biology. INFORMS J. Comput., 16 211-231.
-
(2004)
INFORMS J. Comput
, vol.16
, pp. 211-231
-
-
Greenberg, H.J.1
-
6
-
-
84959064984
-
Comparing assemblies using fragments and mate-pairs
-
Gascuel,O. and Moret,B.M.E, eds Proceedings of the 1st International Workshop on Algorithms in Bioinformatics, Springer, Berlin/ Heidelberg, pp
-
Huson,D.H. et al. (2001) Comparing assemblies using fragments and mate-pairs. In Gascuel,O. and Moret,B.M.E. (eds) Proceedings of the 1st International Workshop on Algorithms in Bioinformatics, Vol. 2149, Lecture Notes in Computer Science, Springer, Berlin/ Heidelberg, pp. 294-306.
-
(2001)
Lecture Notes in Computer Science
, vol.2149
, pp. 294-306
-
-
Huson, D.H.1
-
7
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium (2001) Initial sequencing and analysis of the human genome. Nature, 409, 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
8
-
-
1542374065
-
Incorporating genotyping uncertainty.in haplotype inference for single-nucleotide polymorphisms
-
Kang,H. et al. (2004) Incorporating genotyping uncertainty.in haplotype inference for single-nucleotide polymorphisms. Am. J. Hum. Genet., 74, 495-510.
-
(2004)
Am. J. Hum. Genet
, vol.74
, pp. 495-510
-
-
Kang, H.1
-
9
-
-
84943255398
-
SNPs problems, complexity and algorithms
-
auf der Heide,F.M, ed, Proceedings of Annual European Symposium on Algorithms ESA, Springer, Berlin/Heidelberg, pp
-
Lancia,G. et al. (2001) SNPs problems, complexity and algorithms. In auf der Heide,F.M. (ed.) Proceedings of Annual European Symposium on Algorithms (ESA), Vol. 2161, Lecture Notes in Computer Science Springer, Berlin/Heidelberg, pp. 182-193.
-
(2001)
Lecture Notes in Computer Science
, vol.2161
, pp. 182-193
-
-
Lancia, G.1
-
10
-
-
35648976118
-
The diploid genome sequence of an individual human
-
Levy,S. et al. (2007) The diploid genome sequence of an individual human. PLoS Biology, 5, e254-e254.
-
(2007)
PLoS Biology
, vol.5
-
-
Levy, S.1
-
11
-
-
33847743963
-
Algorithmic strategies for the single nucleotide polymorphism haplotype assembly problem
-
Lippert,R. et al. (2002) Algorithmic strategies for the single nucleotide polymorphism haplotype assembly problem. Brief. Bioinform. 3, 1-9.
-
(2002)
Brief. Bioinform
, vol.3
, pp. 1-9
-
-
Lippert, R.1
-
12
-
-
0033291476
-
A dataset generator for whole genome shotgun sequencing
-
Lengauer,T. Schneider,R. Bork,P. Brutlag,D.L. Glasgow,J.I. Mewes,H.W. and Zimmer,R, eds, AAAI Press, California, pp
-
Myers,G. (1999) A dataset generator for whole genome shotgun sequencing. In Lengauer,T. Schneider,R. Bork,P. Brutlag,D.L. Glasgow,J.I. Mewes,H.W. and Zimmer,R. (eds), Proceedings of the 7th International Conference on Intelligent Systems for Molecular Biology. AAAI Press, California, pp.202-210.
-
(1999)
Proceedings of the 7th International Conference on Intelligent Systems for Molecular Biology
, pp. 202-210
-
-
Myers, G.1
-
13
-
-
35048834697
-
Fast hare: A fast heuristic for single individual SNP haplotype reconstruction
-
Jonassen,I. and Kim,I, eds Proceedings of the 4th International Workshop on Algorithms in Bioinformatics, Springer, Berlin/Heidelberg, pp
-
Panconesi,A. and Sozio,M. (2004) Fast hare: A fast heuristic for single individual SNP haplotype reconstruction. In Jonassen,I. and Kim,I. (eds) Proceedings of the 4th International Workshop on Algorithms in Bioinformatics, Vol. 3240, Lecture Notes in Computer Science, Springer, Berlin/Heidelberg, pp. 266-277.
-
(2004)
Lecture Notes in Computer Science
, vol.3240
, pp. 266-277
-
-
Panconesi, A.1
Sozio, M.2
-
14
-
-
79959524146
-
A haplotype map of the human genome
-
The International HapMap Consortium
-
The International HapMap Consortium (2005) A haplotype map of the human genome. Nature, 437, 1299-1320.
-
(2005)
Nature
, vol.437
, pp. 1299-1320
-
-
-
15
-
-
0035895505
-
The sequence of the human genome
-
Venter,J.C. et al. (2001) The sequence of the human genome. Science, 291, 1304-1351.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
-
16
-
-
19544369865
-
Haplotype reconstruction from SNP fragments by minimum error correction
-
Wang,R.S. et al. (2005) Haplotype reconstruction from SNP fragments by minimum error correction. Bioinformatics, 21, 2456-2462.
-
(2005)
Bioinformatics
, vol.21
, pp. 2456-2462
-
-
Wang, R.S.1
-
17
-
-
34547830829
-
A multi-array multi-SNP genotyping algorithm for affymetrix SNP microarrays
-
Xiao,Y. et al. (2007) A multi-array multi-SNP genotyping algorithm for affymetrix SNP microarrays. Bioinformatics, 23, 1459-1467.
-
(2007)
Bioinformatics
, vol.23
, pp. 1459-1467
-
-
Xiao, Y.1
-
18
-
-
50849099541
-
An improved (and practical) parameterized algorithm for the individual haplotyping problem mfr with mate-pairs
-
DOI 10.1007/s00453-007-9150-2
-
Xie,M. and Wang,J. (2007) An improved (and practical) parameterized algorithm for the individual haplotyping problem mfr with mate-pairs. Algorithmica, DOI 10.1007/s00453-007-9150-2, http://www.springerlink.com/content/p2202u8wrnr65117/.
-
(2007)
Algorithmica
-
-
Xie, M.1
Wang, J.2
-
19
-
-
34547892644
-
Research on parameterized algorithms of the individual haplotyping problem
-
Xie,M. et al. (2007) Research on parameterized algorithms of the individual haplotyping problem. J. Bioinform. Comput. Biol., 5 795-816.
-
(2007)
J. Bioinform. Comput. Biol
, vol.5
, pp. 795-816
-
-
Xie, M.1
-
20
-
-
85192679839
-
Models and algorithms for haplotyping problem
-
Zhang,X.S. et al. (2006) Models and algorithms for haplotyping problem. Curr. Bioinform., 1, 105-114.
-
(2006)
Curr. Bioinform
, vol.1
, pp. 105-114
-
-
Zhang, X.S.1
-
21
-
-
23144447217
-
Haplotype assembly from aligned weighted SNP fragents
-
Zhao,Y.Y. et al. (2005) Haplotype assembly from aligned weighted SNP fragents. Comput. Biol. Chem., 29, 281-287.
-
(2005)
Comput. Biol. Chem
, vol.29
, pp. 281-287
-
-
Zhao, Y.Y.1
|