-
1
-
-
0034904569
-
Novel immune-type receptor genes
-
10.1034/j.1600-065X.2001.1810121.x. 11513146
-
Novel immune-type receptor genes. GW Litman NA Hawke JA Yoder, Immunol Rev 2001 181 250 259 10.1034/j.1600-065X.2001.1810121.x 11513146
-
(2001)
Immunol Rev
, vol.181
, pp. 250-259
-
-
Litman, G.W.1
Hawke, N.A.2
Yoder, J.A.3
-
2
-
-
8144229687
-
Resolution of the novel immune-type receptor gene cluster in zebrafish
-
15496470. 10.1073/pnas.0405242101
-
Resolution of the novel immune-type receptor gene cluster in zebrafish. JA Yoder RT Litman MG Mueller S Desai KP Dobrinski JS Montgomery MP Buzzeo T Ota CT Amemiya NS Trede S Wei JY Djeu S Humphray K Jekosch JA Hernandez Prada DA Ostrov GW Litman, Proc Natl Acad Sci U S A 2004 101 15706 15711 15496470 10.1073/pnas.0405242101
-
(2004)
Proc Natl Acad Sci U S a
, vol.101
, pp. 15706-15711
-
-
Yoder, J.A.1
Litman, R.T.2
Mueller, M.G.3
Desai, S.4
Dobrinski, K.P.5
Montgomery, J.S.6
Buzzeo, M.P.7
Ota, T.8
Amemiya, C.T.9
Trede, N.S.10
Wei, S.11
Djeu, J.Y.12
Humphray, S.13
Jekosch, K.14
Hernandez Prada, J.A.15
Ostrov, D.A.16
Litman, G.W.17
-
4
-
-
0035923584
-
Extraordinary variation in a diversified family of immune-type receptor genes
-
11698645. 10.1073/pnas.231418598
-
Extraordinary variation in a diversified family of immune-type receptor genes. NA Hawke JA Yoder RN Haire MG Mueller RT Litman AL Miracle T Stuge L Shen N Miller GW Litman, Proc Natl Acad Sci U S A 2001 98 13832 13837 11698645 10.1073/pnas.231418598
-
(2001)
Proc Natl Acad Sci U S a
, vol.98
, pp. 13832-13837
-
-
Hawke, N.A.1
Yoder, J.A.2
Haire, R.N.3
Mueller, M.G.4
Litman, R.T.5
Miracle, A.L.6
Stuge, T.7
Shen, L.8
Miller, N.9
Litman, G.W.10
-
5
-
-
34848923722
-
Evolutionary vignettes of natural killer cell receptors
-
10.1016/j.coi.2007.08.002. 17884420
-
Evolutionary vignettes of natural killer cell receptors. JG Sambrook S Beck, Curr Opin Immunol 2007 19 553 560 10.1016/j.coi.2007.08.002 17884420
-
(2007)
Curr Opin Immunol
, vol.19
, pp. 553-560
-
-
Sambrook, J.G.1
Beck, S.2
-
6
-
-
7944219923
-
Investigating the morphology, function and genetics of cytotoxic cells in bony fish
-
15533785. 10.1016/j.cca.2004.03.008
-
Investigating the morphology, function and genetics of cytotoxic cells in bony fish. JA Yoder, Comp Biochem Physiol C Toxicol Pharmacol 2004 138 3 271 280 15533785 10.1016/j.cca.2004.03.008
-
(2004)
Comp Biochem Physiol C Toxicol Pharmacol
, vol.138
, Issue.3
, pp. 271-280
-
-
Yoder, J.A.1
-
7
-
-
27744492083
-
Reconstructing immune phylogeny: New perspectives
-
10.1038/nri1712. 16261174
-
Reconstructing immune phylogeny: new perspectives. GW Litman JP Cannon LJ Dishaw, Nat Rev Immunol 2005 5 866 879 10.1038/nri1712 16261174
-
(2005)
Nat Rev Immunol
, vol.5
, pp. 866-879
-
-
Litman, G.W.1
Cannon, J.P.2
Dishaw, L.J.3
-
8
-
-
35648964118
-
Innate immune gene expression in individual zebrafish after Listonella anguillarum inoculation
-
10.1016/j.fsi.2007.07.002. 17804254
-
Innate immune gene expression in individual zebrafish after Listonella anguillarum inoculation. I Rojo OM de Ilarduya A Estonba MA Pardo, Fish Shellfish Immunol 2007 23 1285 1293 10.1016/j.fsi.2007.07.002 17804254
-
(2007)
Fish Shellfish Immunol
, vol.23
, pp. 1285-1293
-
-
Rojo, I.1
De Ilarduya, O.M.2
Estonba, A.3
Pardo, M.A.4
-
9
-
-
0029009404
-
Identification and characterization of T-cell antigen receptor related genes in phylogenetically diverse vertebrate species
-
10.1007/BF00191226. 7642232
-
Identification and characterization of T-cell antigen receptor related genes in phylogenetically diverse vertebrate species. JP Rast RN Haire RT Litman S Pross GW Litman, Immunogenetics 1995 42 204 212 10.1007/BF00191226 7642232
-
(1995)
Immunogenetics
, vol.42
, pp. 204-212
-
-
Rast, J.P.1
Haire, R.N.2
Litman, R.T.3
Pross, S.4
Litman, G.W.5
-
10
-
-
0033592936
-
A novel multigene family encodes diversified variable regions
-
10611341. 10.1073/pnas.96.26.15080
-
A novel multigene family encodes diversified variable regions. SJ Strong MG Mueller RT Litman NA Hawke RN Haire AL Miracle JP Rast CT Amemiya GW Litman, Proc Natl Acad Sci U S A 1999 96 15080 15085 10611341 10.1073/pnas.96.26.15080
-
(1999)
Proc Natl Acad Sci U S a
, vol.96
, pp. 15080-15085
-
-
Strong, S.J.1
Mueller, M.G.2
Litman, R.T.3
Hawke, N.A.4
Haire, R.N.5
Miracle, A.L.6
Rast, J.P.7
Amemiya, C.T.8
Litman, G.W.9
-
11
-
-
43049097795
-
Evidence for a transposition event in a second NITR gene cluster in zebrafish
-
10.1007/s00251-008-0285-3. 18330557
-
Evidence for a transposition event in a second NITR gene cluster in zebrafish. JA Yoder JP Cannon RT Litman C Murphy JL Freeman GW Litman, Immunogenetics 2008 60 257 265 10.1007/s00251-008-0285-3 18330557
-
(2008)
Immunogenetics
, vol.60
, pp. 257-265
-
-
Yoder, J.A.1
Cannon, J.P.2
Litman, R.T.3
Murphy, C.4
Freeman, J.L.5
Litman, G.W.6
-
12
-
-
33846593880
-
A novel immune-type receptor of Japanese flounder (Paralichthys olivaceus) is expressed in both T and B lymphocytes
-
10.1016/j.fsi.2006.05.007. 17158066
-
A novel immune-type receptor of Japanese flounder (Paralichthys olivaceus) is expressed in both T and B lymphocytes. P Piyaviriyakul H Kondo I Hirono T Aoki, Fish Shellfish Immunol 2007 22 467 476 10.1016/j.fsi.2006.05.007 17158066
-
(2007)
Fish Shellfish Immunol
, vol.22
, pp. 467-476
-
-
Piyaviriyakul, P.1
Kondo, H.2
Hirono, I.3
Aoki, T.4
-
13
-
-
0036448367
-
Cloning novel immune-type inhibitory receptors from the rainbow trout, Oncorhynchus mykiss
-
10.1007/s00251-002-0511-3. 12466899
-
Cloning novel immune-type inhibitory receptors from the rainbow trout, Oncorhynchus mykiss. JA Yoder MG Mueller KM Nichols SS Ristow GH Thorgaard T Ota GW Litman, Immunogenetics 2002 54 662 670 10.1007/s00251-002-0511-3 12466899
-
(2002)
Immunogenetics
, vol.54
, pp. 662-670
-
-
Yoder, J.A.1
Mueller, M.G.2
Nichols, K.M.3
Ristow, S.S.4
Thorgaard, G.H.5
Ota, T.6
Litman, G.W.7
-
14
-
-
0035811055
-
Immune-type receptor genes in zebrafish share genetic and functional properties with genes encoded by the mammalian lymphocyte receptor cluster
-
11381126. 10.1073/pnas.121101598
-
Immune-type receptor genes in zebrafish share genetic and functional properties with genes encoded by the mammalian lymphocyte receptor cluster. JA Yoder MG Mueller S Wei BC Corliss DM Prather T Willis RT Litman JY Djeu GW Litman, Proc Natl Acad Sci USA 2001 98 6771 6776 11381126 10.1073/pnas.121101598
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 6771-6776
-
-
Yoder, J.A.1
Mueller, M.G.2
Wei, S.3
Corliss, B.C.4
Prather, D.M.5
Willis, T.6
Litman, R.T.7
Djeu, J.Y.8
Litman, G.W.9
-
15
-
-
35348911948
-
The zebrafish activating immune receptor Nitr9 signals via Dap12
-
10.1007/s00251-007-0250-6. 17891481
-
The zebrafish activating immune receptor Nitr9 signals via Dap12. S Wei JM Zhuo X Chen R Shah J Liu TM Orcutt D Traver JY Djeu GW Litman JA Yoder, Immunogenetics 2007 59 813 821 10.1007/s00251-007-0250-6 17891481
-
(2007)
Immunogenetics
, vol.59
, pp. 813-821
-
-
Wei, S.1
Zhuo, J.M.2
Chen, X.3
Shah, R.4
Liu, J.5
Orcutt, T.M.6
Traver, D.7
Djeu, J.Y.8
Litman, G.W.9
Yoder, J.A.10
-
16
-
-
34249994907
-
The medaka draft genome and insights into vertebrate genome evolution
-
10.1038/nature05846. 17554307
-
The medaka draft genome and insights into vertebrate genome evolution. M Kasahara K Naruse S Sasaki Y Nakatani W Qu B Ahsan T Yamada Y Nagayasu K Doi Y Kasai T Jindo D Kobayashi A Shimada A Toyoda Y Kuroki A Fujiyama T Sasaki A Shimizu S Asakawa N Shimizu S Hashimoto J Yang Y Lee K Matsushima S Sugano M Sakaizumi T Narita K Ohishi S Haga F Ohta H Nomoto K Nogata T Morishita T Endo I Shin H Takeda S Morishita Y Kohara, Nature 2007 447 714 719 10.1038/nature05846 17554307
-
(2007)
Nature
, vol.447
, pp. 714-719
-
-
Kasahara, M.1
Naruse, K.2
Sasaki, S.3
Nakatani, Y.4
Qu, W.5
Ahsan, B.6
Yamada, T.7
Nagayasu, Y.8
Doi, K.9
Kasai, Y.10
Jindo, T.11
Kobayashi, D.12
Shimada, A.13
Toyoda, A.14
Kuroki, Y.15
Fujiyama, A.16
Sasaki, T.17
Shimizu, A.18
Asakawa, S.19
Shimizu, N.20
Hashimoto, S.21
Yang, J.22
Lee, Y.23
Matsushima, K.24
Sugano, S.25
Sakaizumi, M.26
Narita, T.27
Ohishi, K.28
Haga, S.29
Ohta, F.30
Nomoto, H.31
Nogata, K.32
Morishita, T.33
Endo, T.34
Shin, I.35
Takeda, H.36
Morishita, S.37
Kohara, Y.38
more..
-
17
-
-
46249086621
-
-
UTGB - Medaka. http://medaka.utgenome.org/
-
UTGB - Medaka
-
-
-
18
-
-
33845487130
-
Costimulatory receptors in jawed vertebrates: Conserved CD28, odd CTLA4 and multiple BTLAs
-
10.1016/j.dci.2006.06.003. 16928399
-
Costimulatory receptors in jawed vertebrates: conserved CD28, odd CTLA4 and multiple BTLAs. D Bernard JD Hansen PL Du MP Lefranc A Benmansour P Boudinot, Dev Comp Immunol 2007 31 255 271 10.1016/j.dci.2006.06.003 16928399
-
(2007)
Dev Comp Immunol
, vol.31
, pp. 255-271
-
-
Bernard, D.1
Hansen, J.D.2
Du, P.L.3
Lefranc, M.P.4
Benmansour, A.5
Boudinot, P.6
-
19
-
-
27944477670
-
Concerted and birth-and-death evolution of multigene families
-
16285855. 10.1146/annurev.genet.39.073003.112240
-
Concerted and birth-and-death evolution of multigene families. M Nei AP Rooney, Annu Rev Genet 2005 39 121 152 16285855 10.1146/annurev.genet.39.073003. 112240
-
(2005)
Annu Rev Genet
, vol.39
, pp. 121-152
-
-
Nei, M.1
Rooney, A.P.2
-
20
-
-
0033964050
-
Evolution of vertebrate immunoglobulin variable gene segments
-
10793480
-
Evolution of vertebrate immunoglobulin variable gene segments. T Ota T Sitnikova M Nei, Curr Top Microbiol Immunol 2000 248 221 245 10793480
-
(2000)
Curr Top Microbiol Immunol
, vol.248
, pp. 221-245
-
-
Ota, T.1
Sitnikova, T.2
Nei, M.3
-
21
-
-
40449128929
-
Speed and selection in the evolution of killer-cell immunoglobulin-like receptors
-
10.1111/j.1744-313X.2008.00756.x. 18279370
-
Speed and selection in the evolution of killer-cell immunoglobulin-like receptors. J Martinez-Borra SI Khakoo, Int J Immunogenet 2008 35 89 96 10.1111/j.1744-313X.2008.00756.x 18279370
-
(2008)
Int J Immunogenet
, vol.35
, pp. 89-96
-
-
Martinez-Borra, J.1
Khakoo, S.I.2
-
22
-
-
33847405236
-
Genomic organization of the chicken CD8 locus reveals a novel family of immunoreceptor genes
-
17312148
-
Genomic organization of the chicken CD8 locus reveals a novel family of immunoreceptor genes. HJ Liaw WR Chen YC Huang CW Tsai KC Chang CL Kuo, J Immunol 2007 178 3023 3030 17312148
-
(2007)
J Immunol
, vol.178
, pp. 3023-3030
-
-
Liaw, H.J.1
Chen, W.R.2
Huang, Y.C.3
Tsai, C.W.4
Chang, K.C.5
Kuo, C.L.6
-
26
-
-
33747844624
-
BLAST: Improvements for better sequence analysis
-
16845079. 10.1093/nar/gkl164
-
BLAST: improvements for better sequence analysis. J Ye S McGinnis TL Madden, Nucleic Acids Res 2006 34 W6 W9 16845079 10.1093/nar/gkl164
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Ye, J.1
McGinnis, S.2
Madden, T.L.3
-
28
-
-
38549176691
-
Ensembl 2008
-
18000006. 10.1093/nar/gkm988
-
Ensembl 2008. P Flicek BL Aken K Beal B Ballester M Caccamo Y Chen L Clarke G Coates F Cunningham T Cutts T Down SC Dyer T Eyre S Fitzgerald J Fernandez-Banet S Graf S Haider M Hammond R Holland KL Howe K Howe N Johnson A Jenkinson A Kahari D Keefe F Kokocinski E Kulesha D Lawson I Longden K Megy P Meidl B Overduin A Parker B Pritchard A Prlic S Rice D Rios M Schuster I Sealy G Slater D Smedley G Spudich S Trevanion AJ Vilella J Vogel S White M Wood E Birney T Cox V Curwen R Durbin XM Fernandez-Suarez J Herrero TJ Hubbard A Kasprzyk G Proctor J Smith A Ureta-Vidal S Searle, Nucleic Acids Res 2008 36 D707 D714 18000006 10.1093/nar/gkm988
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Flicek, P.1
Aken, B.L.2
Beal, K.3
Ballester, B.4
Caccamo, M.5
Chen, Y.6
Clarke, L.7
Coates, G.8
Cunningham, F.9
Cutts, T.10
Down, T.11
Dyer, S.C.12
Eyre, T.13
Fitzgerald, S.14
Fernandez-Banet, J.15
Graf, S.16
Haider, S.17
Hammond, M.18
Holland, R.19
Howe, K.L.20
Howe, K.21
Johnson, N.22
Jenkinson, A.23
Kahari, A.24
Keefe, D.25
Kokocinski, F.26
Kulesha, E.27
Lawson, D.28
Longden, I.29
Megy, K.30
Meidl, P.31
Overduin, B.32
Parker, A.33
Pritchard, B.34
Prlic, A.35
Rice, S.36
Rios, D.37
Schuster, M.38
Sealy, I.39
Slater, G.40
Smedley, D.41
Spudich, G.42
Trevanion, S.43
Vilella, A.J.44
Vogel, J.45
White, S.46
Wood, M.47
Birney, E.48
Cox, T.49
Curwen, V.50
Durbin, R.51
Fernandez-Suarez, X.M.52
Herrero, J.53
Hubbard, T.J.54
Kasprzyk, A.55
Proctor, G.56
Smith, J.57
Ureta-Vidal, A.58
Searle, S.59
more..
-
29
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
12824352. 10.1093/nar/gkg500
-
Multiple sequence alignment with the Clustal series of programs. R Chenna H Sugawara T Koike R Lopez TJ Gibson DG Higgins JD Thompson, Nucleic Acids Res 2003 31 3497 3500 12824352 10.1093/nar/gkg500
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
30
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees.
-
3447015
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees. N Saitou M Nei, Mol Biol Evol 1987 4 406 425 3447015
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
31
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
10.1093/bioinformatics/17.12.1244. 11751241
-
MEGA2: molecular evolutionary genetics analysis software. S Kumar K Tamura IB Jakobsen M Nei, Bioinformatics 2001 17 1244 1245 10.1093/ bioinformatics/17.12.1244 11751241
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
32
-
-
33644874839
-
IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences
-
16381979. 10.1093/nar/gkj088
-
IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences. V Giudicelli P Duroux C Ginestoux G Folch J Jabado-Michaloud D Chaume MP Lefranc, Nucleic Acids Res 2006 34 D781 D784 16381979 10.1093/nar/gkj088
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Giudicelli, V.1
Duroux, P.2
Ginestoux, C.3
Folch, G.4
Jabado-Michaloud, J.5
Chaume, D.6
Lefranc, M.P.7
-
33
-
-
0034613151
-
Immune inhibitory receptors
-
10.1126/science.290.5489.84. 11021804
-
Immune inhibitory receptors. JV Ravetch LL Lanier, Science 2000 290 84 89 10.1126/science.290.5489.84 11021804
-
(2000)
Science
, vol.290
, pp. 84-89
-
-
Ravetch, J.V.1
Lanier, L.L.2
-
35
-
-
15944388958
-
Fish as models for environmental genomics
-
10.1038/nrg1590. 15803200
-
Fish as models for environmental genomics. AR Cossins DL Crawford, Nat Rev Genet 2005 6 324 333 10.1038/nrg1590 15803200
-
(2005)
Nat Rev Genet
, vol.6
, pp. 324-333
-
-
Cossins, A.R.1
Crawford, D.L.2
|