메뉴 건너뛰기




Volumn 12, Issue 2, 2008, Pages 143-149

The first RSBI (ISA-TAB) workshop: "Can a simple format work for complex studies?"

(20)  Sansone, Susanna Assunta a   Rocca Serra, Philippe a   Brandizi, Marco a   Brazma, Alvis a   Field, Dawn b   Fostel, Jennifer c   Garrow, Andrew G d   Gilbert, Jack e   Goodsaid, Federico f   Hardy, Nigel g   Jones, Phil a   Lister, Allyson h   Miller, Michael i   Morrison, Norman b,j   Rayner, Tim a   Sklyar, Nataliya a   Taylor, Chris a   Tong, Weida k   Warner, Guy d   Wiemann, Stefan l  


Author keywords

[No Author keywords available]

Indexed keywords

CONFERENCE PAPER; DATA BASE; GENOMICS; INFORMATION PROCESSING; METABOLOMICS; PRIORITY JOURNAL; PROTEOMICS; STANDARD; TECHNOLOGY; TRANSCRIPTOMICS;

EID: 45749145794     PISSN: 15362310     EISSN: None     Source Type: Journal    
DOI: 10.1089/omi.2008.0019     Document Type: Conference Paper
Times cited : (79)

References (30)
  • 1
    • 33748039756 scopus 로고    scopus 로고
    • MGED standards: Work in progress
    • Ball, C.A., and Brazma, A. (2006). MGED standards: work in progress. OMICS 10, 138-144.
    • (2006) OMICS , vol.10 , pp. 138-144
    • Ball, C.A.1    Brazma, A.2
  • 2
    • 18344396568 scopus 로고    scopus 로고
    • Minimum information about a microarray experiment (MIAME) - toward standards for microarray data
    • Brazma, A., Hingamp, P., Quackenbush, J., Sherlock, G., Spellman, P., Stoeckert, C., et al. (2001). Minimum information about a microarray experiment (MIAME) - toward standards for microarray data. Nat Genet 29, 365-371.
    • (2001) Nat Genet , vol.29 , pp. 365-371
    • Brazma, A.1    Hingamp, P.2    Quackenbush, J.3    Sherlock, G.4    Spellman, P.5    Stoeckert, C.6
  • 3
    • 40449117669 scopus 로고    scopus 로고
    • Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
    • Deutsch, E.W., Ball, C.A., Berman, J.J., et al. (2006). Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). Nat Biotechnol 26, 305-312.
    • (2006) Nat Biotechnol , vol.26 , pp. 305-312
    • Deutsch, E.W.1    Ball, C.A.2    Berman, J.J.3
  • 4
    • 43449108562 scopus 로고    scopus 로고
    • The "Minimum Information about a Genome Sequence" (MIGS) specification
    • in press
    • Field, D., Garrity, G.M., Gray, T., et al. (2008a). The "Minimum Information about a Genome Sequence" (MIGS) specification. Nat Biotechnol (in press).
    • (2008) Nat Biotechnol
    • Field, D.1    Garrity, G.M.2    Gray, T.3
  • 5
    • 45749085265 scopus 로고    scopus 로고
    • Meeting report: The 4th Genomic Standards Consortium (GSC) workshop
    • this issue
    • Field, D., Glockner, F.O., Garrity, et al. (2008b). Meeting report: The 4th Genomic Standards Consortium (GSC) workshop OMICS (this issue).
    • (2008) OMICS
    • Field, D.1    Glockner, F.O.2    Garrity3
  • 6
    • 33748081440 scopus 로고    scopus 로고
    • A special issue on Omic data standards
    • Field, D., and Sansone, S.A. (2006). A special issue on Omic data standards. OMICS 10, 84-93.
    • (2006) OMICS , vol.10 , pp. 84-93
    • Field, D.1    Sansone, S.A.2
  • 7
    • 33748481775 scopus 로고    scopus 로고
    • Impact of microarray data quality on genomic data submissions to the FDA
    • Frueh, F.W. (2006). Impact of microarray data quality on genomic data submissions to the FDA. Nat Biotechnol 24, 1105-1107.
    • (2006) Nat Biotechnol , vol.24 , pp. 1105-1107
    • Frueh, F.W.1
  • 8
    • 45749121394 scopus 로고    scopus 로고
    • Sequencing complex marine microbial metatranscriptomes with pyrosequencing technology
    • in review
    • Gilbert, J.A., Edwards, R., Li, W., et al. (2008). Sequencing complex marine microbial metatranscriptomes with pyrosequencing technology. Nat Methods (in review).
    • (2008) Nat Methods
    • Gilbert, J.A.1    Edwards, R.2    Li, W.3
  • 9
    • 35148889036 scopus 로고    scopus 로고
    • The Functional Genomics Experiment model (FuGE): An extensible framework for standards in functional genomics
    • Jones, A.R., Miller, M., Aebersold, R., Apweiler, R., Ball, C.A., Brazma, A., et al. (2007). The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics. Nat Biotechnol 25, 1127-1133.
    • (2007) Nat Biotechnol , vol.25 , pp. 1127-1133
    • Jones, A.R.1    Miller, M.2    Aebersold, R.3    Apweiler, R.4    Ball, C.A.5    Brazma, A.6
  • 11
    • 45749154807 scopus 로고    scopus 로고
    • A standard MIGS/MIMS compliant XML schema: Towards the development of the Genomic Contextual Data Markup Language (GCDML)
    • this issue
    • Kottmann, R., Gray, T., Murphy, et al. (2008). A standard MIGS/MIMS compliant XML schema: towards the development of the Genomic Contextual Data Markup Language (GCDML). OMICS (this issue).
    • (2008) OMICS
    • Kottmann, R.1    Gray, T.2    Murphy3
  • 14
    • 45749119386 scopus 로고    scopus 로고
    • The HUPO proteomics standards initiative easing communication and minimizing data loss in a changing world
    • in press
    • Orchard, S., and Hermjakob, H. (2007). The HUPO proteomics standards initiative easing communication and minimizing data loss in a changing world. Brief Bioinform (in press).
    • (2007) Brief Bioinform
    • Orchard, S.1    Hermjakob, H.2
  • 18
    • 33748078772 scopus 로고    scopus 로고
    • A strategy capitalizing on synergies: The Reporting Structure for Biological Investigation (RSBI) working group
    • Sansone, S.A., Rocca-Serra, P., Tong, W., Fostel, J., Morrison, N., Jones, A.R., et al. (2006). A strategy capitalizing on synergies: the Reporting Structure for Biological Investigation (RSBI) working group. OMICS 10, 164-171.
    • (2006) OMICS , vol.10 , pp. 164-171
    • Sansone, S.A.1    Rocca-Serra, P.2    Tong, W.3    Fostel, J.4    Morrison, N.5    Jones, A.R.6
  • 19
    • 33645968113 scopus 로고    scopus 로고
    • Clinical genomics data standards for pharmacogenetics and pharmacogenomics
    • Shabo, A. (2006). Clinical genomics data standards for pharmacogenetics and pharmacogenomics. Pharmacogenomics 7, 247-253.
    • (2006) Pharmacogenomics , vol.7 , pp. 247-253
    • Shabo, A.1
  • 20
    • 35948989284 scopus 로고    scopus 로고
    • The OBO Foundry: Coordinated evolution of ontologies to support biomedical data integration
    • Smith, B., Ashburner, M., Rosse, C., Bard, J., Bag, W., Ceusters, W., et al. (2007). The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 25, 1251-1255.
    • (2007) Nat Biotechnol , vol.25 , pp. 1251-1255
    • Smith, B.1    Ashburner, M.2    Rosse, C.3    Bard, J.4    Bag, W.5    Ceusters, W.6
  • 21
    • 0037163144 scopus 로고    scopus 로고
    • Design and implementation of microarray gene expression markup language (MAGE-ML)
    • RESEARCH0046
    • Spellman, P.T., Miller M., Stewart J., et al. (2002). Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol 3, RESEARCH0046.
    • (2002) Genome Biol , vol.3
    • Spellman, P.T.1    Miller, M.2    Stewart, J.3
  • 22
    • 45749118607 scopus 로고    scopus 로고
    • Promoting coherent minimum reporting requirements for biological and biomedical investigations: The MIBBI Project
    • in press
    • Taylor, C.F., Field, D., Sansone, S.A., et al. (2008). Promoting coherent minimum reporting requirements for biological and biomedical investigations: the MIBBI Project. Nat Biotechnol (in press).
    • (2008) Nat Biotechnol
    • Taylor, C.F.1    Field, D.2    Sansone, S.A.3
  • 24
    • 36849069880 scopus 로고    scopus 로고
    • An integrated bioinformatics infrastructure essential for advancing pharmacogenomics and personalized medicine in the context of the FDA's critical path initiative
    • Tong, W., Harris, S.C., Fang, H., et al. (2007). An integrated bioinformatics infrastructure essential for advancing pharmacogenomics and personalized medicine in the context of the FDA's critical path initiative. Drug Discov Today 4, 3-8.
    • (2007) Drug Discov Today , vol.4 , pp. 3-8
    • Tong, W.1    Harris, S.C.2    Fang, H.3
  • 25
    • 11144358192 scopus 로고    scopus 로고
    • Development of public toxicogenomics software for microarray data management and analysis
    • Tong, W., Harris, S., Cao, X., Fang, H., Shi, L., Fuscoe, J., et al. (2004). Development of public toxicogenomics software for microarray data management and analysis. Mutat Res 549, 241-253.
    • (2004) Mutat Res , vol.549 , pp. 241-253
    • Tong, W.1    Harris, S.2    Cao, X.3    Fang, H.4    Shi, L.5    Fuscoe, J.6
  • 28
    • 33847660095 scopus 로고    scopus 로고
    • PASSIM - an open source software system for managing information in biomedical studies
    • Viksna, J., Celms, E., Opmanis, M., Podnicks, K., Rucevskis, P., Zarins, A., et al. (2007). PASSIM - an open source software system for managing information in biomedical studies. BMC Bioinformatics 8, 52.
    • (2007) BMC Bioinformatics , vol.8 , pp. 52
    • Viksna, J.1    Celms, E.2    Opmanis, M.3    Podnicks, K.4    Rucevskis, P.5    Zarins, A.6
  • 29
    • 38549162759 scopus 로고    scopus 로고
    • CEBS - chemical effects in biological systems: A public data repository integrating study design and toxicity data with microarray and proteomics data
    • Epub, Oct. 25
    • Waters, M., Stasiewicz, S., Merrick, B.A. et al. (2008). CEBS - chemical effects in biological systems: a public data repository integrating study design and toxicity data with microarray and proteomics data. Nucleic Acids Res 36, D892-D900. Epub 2007, Oct. 25.
    • (2007) Nucleic Acids Res , vol.36
    • Waters, M.1    Stasiewicz, S.2    Merrick, B.A.3
  • 30
    • 45749115243 scopus 로고    scopus 로고
    • MIACA - minimum information about a cellular assay, and the cellular assay object model
    • Wiemann, S., Mehrle, A., Hahne, F., et al. MIACA - minimum information about a cellular assay, and the cellular assay object model. Nat Biotechnol community consultation: http:// www.nature.com/nbt/consult/index.html
    • Nat Biotechnol community consultation
    • Wiemann, S.1    Mehrle, A.2    Hahne, F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.