-
1
-
-
33644873463
-
-
EMBL Nucleotide Sequence Database: developments in, Database issue D10-D15
-
Cochrane, G., et al. EMBL Nucleotide Sequence Database: developments in 2005. Nucleic Acids Res. 34 (Database issue) D10-D15 (2006).
-
(2005)
Nucleic Acids Res
, vol.34
-
-
Cochrane, G.1
-
2
-
-
33846088142
-
The molecular biology database collection: 2006 update
-
Database issue, D3-D5
-
Galperin, M.Y. The molecular biology database collection: 2006 update. Nucleic Acids Res. 34 (Database issue), D3-D5 (2006).
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Galperin, M.Y.1
-
3
-
-
13444282425
-
-
The Stanford Microarray Database accommodates additional microarray platforms and data formats, Database issue, D580-D582
-
Ball, C.A., et al. The Stanford Microarray Database accommodates additional microarray platforms and data formats. Nucleic Acids Res. 33 (Database issue), D580-D582 (2005).
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Ball, C.A.1
-
4
-
-
0037246058
-
ArrayExpress - a public repository for microarray gene expression data at the EBI
-
Brazma, A. et al. ArrayExpress - a public repository for microarray gene expression data at the EBI. Nucleic Acids Res. 31, 68-71 (2003).
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 68-71
-
-
Brazma, A.1
-
5
-
-
33747884345
-
Gene Expression Omnibus (GEO): Microarray data storage, submission, retrieval, and analysis
-
Barrett, T. & Edgar, R. Gene Expression Omnibus (GEO): microarray data storage, submission, retrieval, and analysis. Methods Enzymol. 411, 352-369 (2006).
-
(2006)
Methods Enzymol
, vol.411
, pp. 352-369
-
-
Barrett, T.1
Edgar, R.2
-
6
-
-
33644873213
-
-
The Universal Protein Resource (UniProt, an expanding universe of protein information, Database issue) D187-D191
-
Wu, C.H., et al. The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res. 34 (Database issue) D187-D191 (2006).
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Wu, C.H.1
-
7
-
-
33644876924
-
-
Ensembl, Database issue, D556-D561
-
Birney, E., et al. Ensembl 2006. Nucleic Acids Res. 34 (Database issue), D556-D561 (2006).
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Birney, E.1
-
8
-
-
13444306641
-
NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
Database issue D501-D504
-
Pruitt, K.D., Tatusova, T., Maglott, D.R. NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res. 33 (Database issue) D501-D504 (2005).
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
9
-
-
0029983427
-
Federated 2-DE database: A simple means of publishing 2-DE data
-
Appel, R.D. et al. Federated 2-DE database: a simple means of publishing 2-DE data. Electrophoresis 17, 540-546 (1996).
-
(1996)
Electrophoresis
, vol.17
, pp. 540-546
-
-
Appel, R.D.1
-
10
-
-
0347755458
-
GELBANK: A database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes
-
Database issue, D582-D585
-
Babnigg, G., Giometti, C.S. GELBANK: a database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes. Nucleic Acids Res. 32 (Database issue), D582-D585 (2004).
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Babnigg, G.1
Giometti, C.S.2
-
11
-
-
9144233086
-
PEDRo: A database for storing, searching and disseminating experimental proteomics data
-
Garwood, K. et al. PEDRo: a database for storing, searching and disseminating experimental proteomics data. BMC Genomics [online] 5, 68 (2004).
-
(2004)
BMC Genomics [online]
, vol.5
, pp. 68
-
-
Garwood, K.1
-
12
-
-
33644875983
-
-
PRIDE: a public repository of protein and peptide identifications for the proteomics community, Database issue, D659-D663
-
Jones, P., et al. PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res. 34 (Database issue), D659-D663 (2006).
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Jones, P.1
-
13
-
-
1842424944
-
The need for a public proteomics repository
-
Prince, J.T. et al. The need for a public proteomics repository. Nat. Biotechnol. 22, 471-472 (2004).
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 471-472
-
-
Prince, J.T.1
-
14
-
-
11144320641
-
Open source system for analyzing, validating, and storing protein identification data
-
Craig, R., Cortens, J.P. & Beavis, R.C. Open source system for analyzing, validating, and storing protein identification data. J. Proteome Res. 3, 1234-1242 (2004).
-
(2004)
J. Proteome Res
, vol.3
, pp. 1234-1242
-
-
Craig, R.1
Cortens, J.P.2
Beavis, R.C.3
-
15
-
-
33748031098
-
Experimental standards for high throughput proteomics
-
Hogan, J.M., Higdon, R. & Kolker, E. Experimental standards for high throughput proteomics. OMICS 10, 152-157 (2006).
-
(2006)
OMICS
, vol.10
, pp. 152-157
-
-
Hogan, J.M.1
Higdon, R.2
Kolker, E.3
-
16
-
-
0035640845
-
Some practical guidelines for effective sample size determination
-
Lenth, R.V. Some practical guidelines for effective sample size determination. Am. Stat. 55, 187-193 (2001).
-
(2001)
Am. Stat
, vol.55
, pp. 187-193
-
-
Lenth, R.V.1
-
17
-
-
0038305892
-
The proteomics standards initiative
-
Orchard, S., Hermjakob, H. & Apweiler, R. The proteomics standards initiative. Proteomics 3, 1374-1376 (2003).
-
(2003)
Proteomics
, vol.3
, pp. 1374-1376
-
-
Orchard, S.1
Hermjakob, H.2
Apweiler, R.3
-
18
-
-
33750285086
-
The HUPO Proteomics Standards Initiative - overcoming the fragmentation of proteomics data
-
Hermjakob, H. The HUPO Proteomics Standards Initiative - overcoming the fragmentation of proteomics data. Proteomics 6 (suppl. 2), 34-38 (2006).
-
(2006)
Proteomics
, vol.6
, Issue.SUPPL. 2
, pp. 34-38
-
-
Hermjakob, H.1
-
19
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME) - toward standards for microarray data
-
Brazma, A. et al. Minimum information about a microarray experiment (MIAME) - toward standards for microarray data. Nat. Genet. 29, 365-371 (2001).
-
(2001)
Nat. Genet
, vol.29
, pp. 365-371
-
-
Brazma, A.1
-
20
-
-
0037179669
-
Microarray standards at last
-
Anonymous
-
Anonymous. Microarray standards at last. Nature 419, 323 (2002).
-
(2002)
Nature
, vol.419
, pp. 323
-
-
-
21
-
-
0037190609
-
A guide to microarray experiments - an open letter to the scientific journals
-
Ball, C.A. et al. A guide to microarray experiments - an open letter to the scientific journals. Lancet 360, 1019 (2002).
-
(2002)
Lancet
, vol.360
, pp. 1019
-
-
Ball, C.A.1
-
22
-
-
34547734946
-
-
Online
-
Information for authors. Cell Online 〈http://www.cell.com/misc/page? page=authors〉 (2006).
-
(2006)
Information for authors. Cell
-
-
-
23
-
-
33746139691
-
Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity
-
Sreenu, V.B., Kumar, P., Nagaraju, J. & Nagarajaram, H.A. Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: implications on genome evolution and plasticity. BMC Genomics [online] 7, 78 (2006).
-
(2006)
BMC Genomics [online]
, vol.7
, pp. 78
-
-
Sreenu, V.B.1
Kumar, P.2
Nagaraju, J.3
Nagarajaram, H.A.4
-
24
-
-
33745256720
-
SIMAGE: Simulation of DNA-microarray gene expression data
-
Albers, C.J., Jansen, R.C., Kok, J., Kuipers, O.P. & van Hijum, S.A. SIMAGE: simulation of DNA-microarray gene expression data. BMC Bioinformatics [online] 7, 205 (2006).
-
(2006)
BMC Bioinformatics [online]
, vol.7
, pp. 205
-
-
Albers, C.J.1
Jansen, R.C.2
Kok, J.3
Kuipers, O.P.4
van Hijum, S.A.5
-
25
-
-
33750879597
-
Lack of correct data format and comparability limits future integrative microarray research
-
Larsson, O. & Sandberg, R. Lack of correct data format and comparability limits future integrative microarray research. Nat. Biotechnol. 24, 1322-1323 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 1322-1323
-
-
Larsson, O.1
Sandberg, R.2
-
26
-
-
33750851693
-
The need for standards, not guidelines, in biological data reporting and sharing
-
Burgoon, L.D. The need for standards, not guidelines, in biological data reporting and sharing. Nat. Biotechnol. 24, 1369-1373 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 1369-1373
-
-
Burgoon, L.D.1
-
27
-
-
33845699793
-
NCBI GEO standards and services for microarray data
-
Edgar, R. & Barrett, T. NCBI GEO standards and services for microarray data. Nat. Biotechnol. 24, 1471-1472 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 1471-1472
-
-
Edgar, R.1
Barrett, T.2
-
28
-
-
0035857966
-
The CONSORT statement: Revised recommendations for improving the quality of reports of parallel-group randomised trials
-
Moher, D., Schulz, K.F. & Altman, D.G. The CONSORT statement: revised recommendations for improving the quality of reports of parallel-group randomised trials. Lancet 357, 1191-1194 (2001).
-
(2001)
Lancet
, vol.357
, pp. 1191-1194
-
-
Moher, D.1
Schulz, K.F.2
Altman, D.G.3
-
29
-
-
0033610734
-
Improving the quality of reports of meta-analyses of randomised controlled trials: The QUOROM statement
-
Moher, D. et al. Improving the quality of reports of meta-analyses of randomised controlled trials: the QUOROM statement. Lancet 354, 1896-1900 (1999).
-
(1999)
Lancet
, vol.354
, pp. 1896-1900
-
-
Moher, D.1
-
30
-
-
0037417585
-
Towards complete and, accurate reporting of studies of diagnostic accuracy: The STARD initiative
-
Bossuyt, P.M. et al. Towards complete and, accurate reporting of studies of diagnostic accuracy: the STARD initiative. Br. Med. J. 326, 41-44 (2003).
-
(2003)
Br. Med. J
, vol.326
, pp. 41-44
-
-
Bossuyt, P.M.1
-
31
-
-
23644432019
-
REporting recommendations for tumour MARKer prognostic studies (REMARK)
-
McShane, L.M. et al. REporting recommendations for tumour MARKer prognostic studies (REMARK). Eur. J. Cancer 41, 1690-1696 (2005).
-
(2005)
Eur. J. Cancer
, vol.41
, pp. 1690-1696
-
-
McShane, L.M.1
-
32
-
-
34547788688
-
Standard for exchange of nonclinical data (SEND). Implementation guide for animal toxicology studies
-
CDISC SEND Team, Version 2.3
-
CDISC SEND Team. Standard for exchange of nonclinical data (SEND). Implementation guide for animal toxicology studies. Version 2.3. CDISC Standards 〈http://www.cdisc.org/models/send/v2.3〉 (2005).
-
(2005)
CDISC Standards
-
-
-
33
-
-
33748671821
-
Does the CONSORT checklist improve the quality of reports of randomised controlled trials? A systematic review
-
Plint, A.C. et al. Does the CONSORT checklist improve the quality of reports of randomised controlled trials? A systematic review. Med. J. Aust. 185, 263-267 (2006).
-
(2006)
Med. J. Aust
, vol.185
, pp. 263-267
-
-
Plint, A.C.1
-
34
-
-
33748678946
-
The quality of diagnostic accuracy studies since the STARD statement - has it improved?
-
Smidt, N. et al. The quality of diagnostic accuracy studies since the STARD statement - has it improved? Neurology 67, 792-797 (2006).
-
(2006)
Neurology
, vol.67
, pp. 792-797
-
-
Smidt, N.1
-
35
-
-
45749118607
-
Promoting coherent minimum reporting requirements for biological and biomedical investigations: The MIBBI project
-
in the press
-
Taylor, C.F. et al. Promoting coherent minimum reporting requirements for biological and biomedical investigations: the MIBBI project. Nat. Biotechnol. (in the press).
-
Nat. Biotechnol
-
-
Taylor, C.F.1
-
36
-
-
0003445692
-
-
Wilkins, M.R, Williams, K.L, Appel, R.D. & Hochstrasser, D.F, eds, Springer, Berlin
-
Wilkins, M.R., Williams, K.L., Appel, R.D. & Hochstrasser, D.F. (eds.) Proteome Research: New Frontiers in Functional Genomics (Springer, Berlin, 1997).
-
(1997)
Proteome Research: New Frontiers in Functional Genomics
-
-
-
39
-
-
34547820224
-
-
Publication guidelines for the analysis and documentation of peptide and protein identifications. Molecular & Cellular Proteomics 〈http://www.mcponline.org/misc/ParisReport_Final.shtml〉 (2007).
-
Publication guidelines for the analysis and documentation of peptide and protein identifications. Molecular & Cellular Proteomics 〈http://www.mcponline.org/misc/ParisReport_Final.shtml〉 (2007).
-
-
-
-
40
-
-
3042735127
-
The need for guidelines in publication of peptide and protein identification data: Working group on publication guidelines for peptide and protein identification data
-
Carr, S. et al. The need for guidelines in publication of peptide and protein identification data: working group on publication guidelines for peptide and protein identification data. Mol. Cell. Proteomics 3, 531-533 (2004).
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 531-533
-
-
Carr, S.1
-
41
-
-
31344448066
-
Guidelines for the next 10 years of proteomics
-
Wilkins, M.R. et al. Guidelines for the next 10 years of proteomics. Proteomics 6, 4-8 (2006).
-
(2006)
Proteomics
, vol.6
, pp. 4-8
-
-
Wilkins, M.R.1
-
42
-
-
30744438115
-
Computational Proteomics Analysis System (CPAS): An extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments
-
Rauch, A. et al. Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments. J. Proteome Res. 5, 112-121 (2006).
-
(2006)
J. Proteome Res
, vol.5
, pp. 112-121
-
-
Rauch, A.1
-
43
-
-
33750879076
-
ArrayExpress service for reviewers/editors of DNA microarray papers
-
Brazma, A. & Parkinson, H. ArrayExpress service for reviewers/editors of DNA microarray papers. Nat. Biotechnol. 24, 1321-1322 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 1321-1322
-
-
Brazma, A.1
Parkinson, H.2
-
44
-
-
5044225660
-
Data hoarding is harming proteomics
-
Noble, W.S. Data hoarding is harming proteomics. Nat. Biotechnol. 22, 1209 (2004).
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 1209
-
-
Noble, W.S.1
-
45
-
-
33745476107
-
-
Quackenbush, J. Standardizing the standards. Mol. Syst. Biol. 2, 2006.0010 (2006).
-
Quackenbush, J. Standardizing the standards. Mol. Syst. Biol. 2, 2006.0010 (2006).
-
-
-
-
46
-
-
34249107988
-
The minimum information required for reporting a molecular interaction experiment (MIMIx)
-
Orchard, S. et al. The minimum information required for reporting a molecular interaction experiment (MIMIx). Nat. Biotechnol. 25, 894-898 (2007).
-
(2007)
Nat. Biotechnol
, vol.25
, pp. 894-898
-
-
Orchard, S.1
|