A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes

Computational Biology and Chemistry

Volumn 32, Issue 4, 2008, Pages 298-301

  Hu, Jing ^a   Yan, Changhui ^a  

^a Utah State University ^*  (United States)

Author keywords

Beta barrel; k Nearest neighbor; Prediction; Weighted Euclidian distance

Indexed keywords

AMINES; BACTERIOLOGY; BIOMOLECULES; CELL MEMBRANES; FORECASTING; SET THEORY;

(MIN ,MAX ,+) FUNCTIONS; BACTERIAL PROTEOMES; DI-PEPTIDES; HOMOLOGOUS SEQUENCES; K NEAREST NEIGHBOR (K-NN); PREDICTION PERFORMANCE; TRANSMEMBRANE (TM); WEB SERVERS;

PROTEINS;

BACTERIAL PROTEIN; CARRIER PROTEIN; PEPTIDE; PROTEOME;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; BIOLOGY; CHEMISTRY; GENETICS; GRAM NEGATIVE BACTERIUM; METABOLISM; METHODOLOGY; PREDICTION AND FORECASTING; SEQUENCE HOMOLOGY;

ALGORITHMS; AMINO ACID SEQUENCE; BACTERIAL PROTEINS; COMPUTATIONAL BIOLOGY; GRAM-NEGATIVE BACTERIA; MEMBRANE TRANSPORT PROTEINS; PEPTIDES; PREDICTIVE VALUE OF TESTS; PROTEOME; SEQUENCE HOMOLOGY;

BACTERIA (MICROORGANISMS); EUCLIDIA; NEGIBACTERIA;

EID: 45549108281     PISSN: 14769271     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.compbiolchem.2008.03.010     Document Type: Article

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