Catalysis and regulation in Rubisco

Journal of Experimental Botany

Volumn 59, Issue 7, 2008, Pages 1555-1568

  Andersson, Inger ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

Author keywords

Carbon fixation; CO2 O2 specificity; Light regulation; Rubisco; Structure function studies

Indexed keywords

OXYGEN; RIBULOSEBISPHOSPHATE CARBOXYLASE;

CATALYSIS; CHEMICAL STRUCTURE; CHEMISTRY; CONFERENCE PAPER; GENETICS; METABOLISM; PROTEIN CONFORMATION;

CATALYSIS; MODELS, MOLECULAR; OXYGEN; PROTEIN CONFORMATION; RIBULOSE-BISPHOSPHATE CARBOXYLASE;

EID: 44649180586     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/ern091     Document Type: Conference Paper

References (138)

1. Andersson I. 1996. Large structures at high resolution: spinach ribulose-1,5-bisphosphate carboxylase/oxygenase at 1.6 Å resolution. Journal of Molecular Biology 259, 160-174.
2. Andersson I, Backlund A. 2008. Structure and function of Rubisco. Plant Physiology and Biochemistry 46, 275-291.
3. Andersson I, Clifton IJ, Fülöp V, Hajdu J. 1991. High speed high resolution data collection on spinach Rubisco using a Weissenberg camera at the Photon Factory. In: Moras D, Podjarny AD, Thierry JC, eds. Crystallographic computing 5: from chemistry to biology. Oxford: Oxford University Press.
4. Andersson I, Knight S, Schneider G, Lindqvist Y, Lundqvist T, Brändén CI, Lorimer GH. 1989. Crystal structure of the active site of ribulose-bisphosphate carboxylase. Nature 337, 229-234.
5. Andersson I, Taylor TC. 2003. Structural framework for catalysis and regulation in ribulose-1,5-bisphosphate carboxylase/oxygenase. Archives of Biochemistry and Biophysics 414, 130-140.
6. Andres J, Safont VS, Queralt J, Tapia O. 1993. A theoretical-study of the singlet-triplet energy-gap dependence upon rotation and pyramidalization for 1,2-dihydroxyethylene: a simple-model to study the enediol moiety in rubisco substrate. Journal of Physical Chemistry 97, 7888-7893.
7. Andrews TJ. 1988. Catalysis by cyanobacterial ribulose- bisphosphate carboxylase large subunits in the complete absence of small subunits. Journal of Biological Chemistry 263, 12213-12219.
8. Andrews TJ, Lorimer GH. 1987. Rubisco: structure, mechanisms and prospects for improvement. In: Hatch MD, Boardman NK, eds. The biochemistry of plants: a comprehensive treatise, Vol. 10. Photosynthesis. Orlando: Academic Press, 131-218.
9. Andrews TJ, Whitney SM. 2003. Manipulating ribulose bisphosphate carboxylase/oxygenase in the chloroplasts of higher plants. Archives of Biochemistry and Biophysics 414, 159-169.
10. 2 to the activation sites. Plant Cell Physiology 36, 425-433.
11. Badger MR, Lorimer GH. 1981. Interaction of sugar phosphates with the catalytic site of ribulose-1,5-bisphosphate carboxylase. Biochemistry 20, 2219-2225.
12. Bainbridge G, Madgwick P, Parmar S, Mitchell R, Paul M, Pitts J, Keys AJ, Parry MAJ. 1995. Engineering Rubisco to change its catalytic properties. Journal of Experimental Botany 46, 1269-1276.
13. Barraclough R, Ellis RJ. 1980. Protein-synthesis in chloroplasts. 9. Assembly of newly-synthesized large subunits into ribulose bisphosphate carboxylase in isolated intact pea-chloroplasts. Biochimica et Biophysica Acta 608, 19-31.
14. 2+. Biochemistry 25, 1864-1869.
15. Chen Z, Spreitzer RJ. 1989. Chloroplast intragenic suppression enhances the low specificity of mutant ribulose-1,5-bisphosphate carboxylase/oxygenase. Journal of Biological Chemistry 264, 3051-3053.
16. 2 specificity of chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry 30, 8846-8850.
17. Cleland WW, Andrews TJ, Gutteridge S, Hartman FC, Lorimer GH. 1998. Mechanism of Rubisco: the carbamate as a general base. Chemical Reviews 98, 549-561.
18. Curmi PMG, Cascio D, Sweet RM, Eisenberg D, Schreuder HA. 1992. Crystal structure of the unactivated form of ribulose-1,5-bisphosphate carboxylase/oxygenase from tobacco refined at 2.0 Å resolution. Journal of Biological Chemistry 267, 16980-16989.
19. Delwiche CF, Palmer JD. 1996. Rampant horizontal transfer and duplication of rubisco genes in eubacteria and plastids. Molecular Biology and Evolution 13, 873-882.
20. Dodd AN, Borland AM, Haslam RP, Griffiths H, Maxwell K. 2002. Crassulacean acid metabolism: plastic, fantastic. Journal of Experimental Botany 53, 569-580.
21. Duff AP, Andrews TJ, Curmi PMG. 2000. The transition between the open and closed states of Rubisco is triggered by the inter-phosphate distance of the bound bisphosphate. Journal of Molecular Biology 298, 903-916.
22. Edmondson DL, Badger MR, Andrews TJ. 1990a. A kinetic characterization of slow inactivation of ribulosebisphosphate carboxylase during catalysis. Plant Physiology 93, 1376-1382.
23. Edmondson DL, Badger MR, Andrews TJ. 1990c. Slow inactivation of ribulose bisphosphate carboxylase during catalysis is not due to decarbamylation of the catalytic site. Plant Physiology 93, 1383-1389.
24. Edmondson DL, Badger MR, Andrews TJ. 1990d. Slow inactivation of ribulose bisphosphate carboxylase during catalysis is caused by accumulation of a slow, tight-binding inhibitor at the catalytic site. Plant Physiology 93, 1390-1397.
25. Edmondson DL, Kane HJ, Andrews TJ. 1990b. Substrate isomerization inhibits ribulose bisphospate carboxylase-oxygenase during catalysis. FEBS Letters 260, 62-66.
26. Ellis RJ. 1979. Most abundant protein in the world. Trends in Biochemical Sciences 4, 241-244.
27. Emlyn-Jones D, Woodger FJ, Price GD, Whitney SM. 2006. RbcX can function as a Rubisco chaperonin, but is non-essential in Synechococcus PCC7942. Plant and Cell Physiology 47, 1630-1640.
28. Esquivel MG, Anwaruzzaman M, Spreitzer RJ. 2002. Deletion of nine carboxy-terminal residues of the Rubisco small subunit decreases thermal stability but does not eliminate function. FEBS Letters 520, 73-76.
29. Field CB, Behrenfeld MJ, Randerson JT, Falkowski P. 1998. Primary production of the biosphere: integrating terrestrial and oceanic components. Science 281, 237-240.
30. Gatenby AA, Ellis RJ. 1990. Chaperone function: the assembly of ribulose bisphosphate carboxylase-oxygenase. Annual Review of Cell Biology 6, 125-149.
31. Gibson J, Tabita FR. 1977. Different molecular forms of D-ribulose-1,5-bisphosphate carboxylase from Rhodopseudomonas sphaeroides. Journal of Biological Chemistry 252, 943-949.
32. 2 concentrating mechanisms in algae: mechanisms, environmental modulation, and evolution. Annual Review of Plant Biology 56, 99-131.
33. Goloubinoff P, Christeller JT, Gatenby AA, Lorimer GH. 1989. Reconstitution of active dimeric ribulose bisphosphate carboxylase from an unfolded state depends on 2 chaperonin proteins and Mg-ATP. Nature 342, 884-889.
34. Gutteridge S. 1991. The relative catalytic specificities of the large subunit core of Synechococcus ribulose bisphosphate carboxylase oxygenase. Journal of Biological Chemistry 266, 7359-7362.
35. Gutteridge S, Julien B. 1989. A phosphatase from chloroplast stroma of Nicotiana tabacum hydrolyses 2′-carboxyarabinitol 1-phosphate, the natural inhibitor of Rubisco to 2′-carboxyarabinitol. FEBS Letters 254, 225-230.
36. Gutteridge S, Parry MAJ, Burton S, Keys AJ, Mudd A, Feeney J, Servaites JC, Pierce J. 1986. A nocturnal inhibitor of carboxylation in leaves. Nature 324, 274-276.
37. Gutteridge S, Rhoades DF, Herrmann C. 1993. Site-specific mutations in a loop region of the C-terminal domain of the large subunit of ribulose bisphosphate carboxylase/oxygenase that influence substrate partitioning. Journal of Biological Chemistry 268, 7818-7824.
38. Hansen S, Vollan VB, Hough E, Andersen K. 1999. The crystal structure of Rubisco from Alcaligenes eutrophus reveals a novel central eight-stranded β-barrel formed by β-strands from four subunits. Journal of Molecular Biology 288, 609-621.
39. Hanson TE, Tabita FR. 2001. A ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO)-like protein from Chlorobium tepidum that is involved with sulfur metabolism and the response to oxidative stress. Proceedings of the National Academy of Sciences, USA 98, 4397-4402.
40. Harpel MR, Hartman FC. 1996. Facilitation of the terminal proton transfer reaction of ribulose 1,5-bisphosphate carboxylase oxygenase by active-site Lys166. Biochemistry 35, 13865-13870.
41. Hartman FC, Harpel MR. 1994. Structure, function, regulation, and assembly of D-ribulose-1,5-bisphosphate carboxylase oxygenase. Annual Review of Biochemistry 63, 197-234.
42. Hayashi NR, Oguni A, Yaguchi T, Chung SY, Nishihara H, Kodama T, Igarashi Y. 1998. Different properties of gene products of three sets of ribulose 1,5-bisphosphate carboxylase/oxygenase from a marine obligately autotrophic hydrogenoxidizing bacterium, Hydrogenovibrio marinus strain MH-110. Journal of Fermentation and Bioengineering 85, 150-155.
43. Hemmingsen SM, Woolford C, Vandervies SM, Tilly K, Dennis DT, Georgopoulos CP, Hendrix RW, Ellis RJ. 1988. Homologous plant and bacterial proteins chaperone oligomeric protein assembly. Nature 333, 330-334.
44. Holbrook GP, Bowes G, Salvucci ME. 1989. Degradation of 2-carboxyarabinitol 1-phosphate by a specific chloroplast phosphatase. Plant Physiology 90, 673-678.
45. Houtz RL, Portis AR. 2003. The life of ribulose 1,5-bisphosphate carboxylase/oxygenase-post-translational facts and mysteries. Archives of Biochemistry and Biophysics 414, 150-158.
46. Imker HJ, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA. 2007. Mechanistic diversity in the RuBisCO superfamily: the 'Enolase' in the methionine salvage pathway in Geobacillus kaustophilus. Biochemistry 46, 4077-4089.
47. Johal S, Partridge BE, Chollet R. 1985. Structural characterization and the determination of negative co-operativity in the tight-binding of 2-carboxyarabinitol bisphosphate to higher-plant ribulose bisphosphate carboxylase. Journal of Biological Chemistry 260, 9894-9904.
48. Jordan DB, Chollet R. 1983. Inhibition of ribulose bisphosphate carboxylase by substrate ribulose 1,5-bisphosphate. Journal of Biological Chemistry 258, 3752-3758.
49. Jordan DB, Chollet R, Ogren WL. 1983. Binding of phosphorylated effectors by active and inactive forms of ribulose-1, 5-bisphosphate carboxylase. Biochemistry 22, 3410-3418.
50. Jordan DB, Ogren WL. 1981. Species variation in the specificity of ribulose biphosphate carboxylase/oxygenase. Nature 291, 513-515.
51. Karkehabadi S, Peddi SR, Anwaruzzaman M, Taylor TC, Cederlund A, Genkov T, Andersson I, Spreitzer RJ. 2005. Chimeric small subunits influence catalysis without causing global conformational changes in the crystal structure of ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry 44, 9851-9861.
52. 2 specificity of ribulose 1,5-bisphosphate carboxylase/oxygenase. Biochemistry 46, 11080-11089.
53. Karkehabadi S, Taylor TC, Andersson I. 2003. Calcium supports loop closure but not catalysis in Rubisco. Journal of Molecular Biology 334, 65-73.
54. Kitano K, Maeda N, Fukui T, Atomi H, Imanaka T, Miki K. 2001. Crystal structure of a novel-type archaeal Rubisco with pentagonal structure. Structure 9, 473-481.
55. 2 by Rubisco. Biochemistry 37, 15414-15422.
56. Knight S, Andersson I, Brändén CI. 1989. Re-examination of the three-dimensional structure of the small subunit of Rubisco from higher plants. Science 244, 702-705.
57. Knight S, Andersson I, Brändén CI. 1990. Crystallographic analysis of ribulose 1,5-bisphosphate carboxylase from spinach at 2.4 Å resolution: subunit interactions and the active site. Journal of Molecular Biology 215, 113-160.
58. Knowles JR. 1991. Enzyme catalysis: not different, just better. Nature 350, 121-124.
59. 2, and ribulose 1,5-diphosphate carboxylase. Plant Physiology 54, 678-685.
60. Larimer FW, Soper TS. 1993. Overproduction of Anabaena-7120 ribulose-bisphosphate carboxylase oxygenase in Escherichia coli. Gene 126, 85-92.
61. Larson EM, O'Brien CM, Zhu GH, Spreitzer RJ, Portis AR. 1997. Specificity for activase is changed by a Pro-89 to Arg substitution in the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase. Journal of Biological Chemistry 272, 17033-17037.
62. Lee BG, Read BA, Tabita FR. 1991. Catalytic properties of recombinant octameric, hexadecameric, and heterologous cyanobacterial/bacterial ribulose-1,5-bisphosphate carboxylase oxygenase. Archives of Biochemistry and Biophysics 291, 263-269.
63. Li CH, Salvucci ME, Portis AR. 2005. Two residues of rubisco activase involved in recognition of the rubisco substrate. Journal of Biological Chemistry 280, 24864-24869.
64. Li H, Sawaya MR, Tabita FR, Eisenberg D. 2005. Crystal structure of a RuBisCO-like protein from the green sulfur bacterium Chlorobium tepidum. Structure 13, 779-789.
65. Li LA, Tabita FR. 1997. Maximum activity of recombinant ribulose 1,5-bisphosphate carboxylase/oxygenase of Anabaena sp. strain CA requires the product of the rbcX gene. Journal of Bacteriology 179, 3793-3796.
66. Lorimer GH, Andrews TJ, Pierce J, Schloss JV. 1986. 2′-Carboxy-3-keto-D-arabinitol 1,5-bisphosphate, the 6-carbon intermediate of the ribulose bisphosphate carboxylase reaction. Philosophical Transactions of the Royal Society of London B 313, 397-407.
67. 2+. Biochemistry 19, 5321-5328.
68. Lorimer GH, Chen YR, Hartman FC. 1993. A role for the ε-amino group of lysine-334 of ribulose-1,5-bisphosphate carboxylase in the addition of carbon-dioxide to the 2,3-enediol(ate) of ribulose 1,5-bisphosphate. Biochemistry 32, 9018-9024.
69. Lundqvist T, Schneider G. 1989. Crystal-structure of the binary complex of ribulose-1,5-bisphosphate carboxylase and its product, 3-phospho-D-glycerate. Journal of Biological Chemistry 264, 3643-3646.
70. Lundqvist T, Schneider G. 1991. Crystal-structure of activated ribulose-1,5-bisphosphate carboxylase complexed with its substrate, ribulose-1,5-bisphosphate. Journal of Biological Chemistry 266, 12604-12611.
71. Marcus Y, Altman-Gueta H, Finkler A, Gurevitz M. 2005. Mutagenesis at two distinct phosphate-binding sites unravels their differential roles in regulation of rubisco activation and catalysis. Journal of Bacteriology 187, 4222-4228.
72. Marcus Y, Gurevitz M. 2000. Activation of cyanobacterial RuBP-carboxylase/oxygenase is facilitated by inorganic phosphate via two independent mechanisms. European Journal of Biochemistry 267, 5995-6003.
73. 2 fixation by Rubisco: computational dissection of the key steps of carboxylation, hydration, and C-C bond cleavage. Journal of the American Chemical Society 123, 10821-10829.
74. McCurry SD, Pierce J, Tolbert NE, Orme-Johnson WH. 1981. On the mechanism of effector-mediated activation of ribulose bisphosphate carboxylase-oxygenase. Journal of Biological Chemistry 256, 6623-6628.
75. McCurry SD, Tolbert NE. 1977. Inhibition of ribulose-1,5- bisphosphate carboxylase-oxygenase by xylulose 1,5-bisphosphate. Journal of Biological Chemistry 252, 8344-8346.
76. McNevin DB, Badger MR, Whitney SM, von Caemmerer S, Tcherkez GG, Farquhar GD. 2007. Differences in carbon isotope discrimination of three variants of D-ribulose-1,5-bisphosphate carboxylase/oxygenase reflect differences in their catalytic mechanisms. Journal of Biological Chemistry 282, 36068-36076.
77. Mizohata E, Matsumura H, Okano Y, et al. 2002. Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol- 1,5-bisphosphate. Journal of Molecular Biology 316, 679-691.
78. Moore BD, Kobza J, Seemann JR. 1991. Measurement of 2-carboxyarabinitol 1-phosphate in plant leaves by isotope dilution. Plant Physiology 96, 208-213.
79. Morell MK, Kane HJ, Andrews TJ. 1990. Carboxyl terminal deletion mutants of ribulose bisphosphate carboxylase from Rhodospirillum rubrum. FEBS Letters 265, 41-45.
80. Morell MK, Wilkin JM, Kane HJ, Andrews TJ. 1997. Side reactions catalysed by ribulose-bisphosphate carboxylase in the presence and absence of small subunits. Journal of Biological Chemistry 272, 5445-5451.
81. Moreno J, García-Murria MJ, Marín-Navarro J. 2008. Redox modulation of Rubisco conformation and activity through its cysteine residues. Journal of Experimental Botany. Advance Access published on Jan 22, (2008), PMID: 18212026. doi:10.1093/jxb/erm310.
82. Morse D, Salois P, Markovic P, Hastings JW. 1995. A nuclear-encoded form II RuBisCO in dinoflagellates. Science 268, 1622-1624.
83. Murphy BA, Grundy FJ, Henkin TM. 2002. Prediction of gene function in methylthioadenosine recycling from regulatory signals. Journal of Bacteriology 184, 2314-2318.
84. Neuwald AF, Aravind L, Spouge JL, Koonin EV. 1999. AAA(+): a class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Research 9, 27-43.
85. Newman J, Gutteridge S. 1993. The X-ray structure of Synechococcus ribulose-bisphosphate carboxylase/oxygenase-activated quaternary complex at 2.2-Å resolution. Journal of Biological Chemistry 268, 25876-25886.
86. Newman J, Gutteridge S. 1994. Structure of an effector-induced inactivated state of ribulose 1,5-bisphosphate carboxylase/oxygenase: the binary complex between enzyme and xylulose 1,5-bisphosphate. Structure 2, 495-502.
87. Onizuka T, Endo S, Akiyama H, Kanai S, Hirano M, Yokota A, Tanaka S, Miyasaka H. 2004. The rbcX gene product promotes the production and assembly of ribulose-1,5-bisphosphate carboxylase/oxygenase of Synechococcus sp PCC7002 in Escherichia coli. Plant and Cell Physiology 45, 1390-1395.
88. Osmond CB. 1981. Photorespiration and photoinhibition: some implications for the energetics of photosynthesis. Biochimica et Biophysica Acta 639, 77-98.
89. Ott CM, Smith BD, Portis AR, Spreitzer RJ. 2005. Activase region on chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase: nonconservative substitution in the large subunit alters species specificity of protein interaction. Journal of Biological Chemistry 275, 26241-26244.
90. Parry MAJ, Andralojc PJ, Mitchell RAC, Madgwick P, Keys AJ. 2003. Manipulation of Rubisco: the amount, activity, function, and regulation. Journal of Experimental Botany 54, 1321-1333.
91. Parry MAJ, Andralojc PJ, Parmar S, Keys AJ, Habash D, Paul MJ, Alred R, Quick WP, Servaites JC. 1997. Regulation of Rubisco by inhibitors in the light. Plant, Cell and Environment 20, 528-534.
92. 2 ions on the reactions of ribulose 1,5-bisphosphate carboxylase: activation of ribulose 1,5-bisphosphate carboxylase. Journal of Experimental Botany 35, 157-168.
93. Parry MAJ, Keys AJ, Madgwick PJ, Carmo-Silva AE, Andralojc PJ. 2008. Rubisco regulation: a role for inhibitors. Journal of Experimental Botany 59, (in press).
94. Parry MAJ, Madgwick P, Parmar S, Cornelius MJ, Keys AJ. 1992. Mutations in loop six of the large subunit of ribulose-1,5-bisphosphate carboxylase affect substrate specificity. Planta 187, 109-112.
95. 2: co-operativity between the subunits of the enzyme. Journal of Experimental Botany 36, 1396-1404.
96. 2+. FEBS Letters 159, 107-111.
97. Pearce FG, Andrews TJ. 2003. The relationship between side reactions and slow inhibition of ribulose-bisphosphate carboxylase revealed by a loop 6 mutant of the tobacco enzyme. Journal of Biological Chemistry 278, 32526-32536.
98. Pettersson G, Ryde Pettersson U. 1988. Effects of metabolite binding to ribulose bisphosphate carboxylase on the activity of the Calvin photosynthesis cycle. European Journal of Biochemistry 177, 351-355.
99. Pierce J, Lorimer GH, Reddy GS. 1986. Kinetic mechanism of ribulose bisphosphate carboxylase: evidence for an ordered, sequential reaction. Biochemistry 25, 1636-1644.
100. Pierce J, Tolbert NE, Barker R. 1980. Interaction of ribulose bisphosphate carboxylase-oxygenase with transition-state analogs. Biochemistry 19, 934-942.
101. Portis A. 2003. Rubisco activase: Rubisco's catalytic chaperone. Photosynthesis Research 75, 11-27.
102. Portis AR, Li C, Wang D, Salvucci ME. 2008. Regulation of Rubisco activase and its interaction with Rubisco. Journal of Experimental Botany 59, (in press).
103. Portis AR, Parry MAJ. 2007. Discoveries in Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase): a historical perspective. Photosynthesis Research 94, 121-143.
104. Price DG, Badger MR, Woodger FJ, Long BM. 2008. Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants. Journal of Experimental Botany 59, (in press).
105. Ranty B, Lundqvist T, Schneider G, Madden M, Howard R, Lorimer GH. 1990. Truncation of ribulose-1,5-bisphosphate carboxylase oxygenase (rubisco) from Rhodospirillum rubrum affects the holoenzyme assembly and activity. EMBO Journal 9, 1365-1373.
106. Robinson SP, Portis AR. 1988. Release of the nocturnal inhibitor, carboxyarabinitol-1-phosphate, from ribulose bisphosphate carboxylase oxygenase by Rubisco activase. FEBS Letters 233, 413-416.
107. Rowan R, Whitney SM, Fowler A, Yellowlees D. 1996. Rubisco in marine symbiotic dinoflagellates: form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family. The Plant Cell 8, 539-553.
108. Saschenbrecker S, Bracher A, Rao KV, Rao BV, Hartl FU, Hayer-Hartl M. 2007. Structure and function of RbcX, an assembly chaperone for hexadecameric rubisco. Cell 129, 1189-1200.
109. 2 specificity. Journal of Biological Chemistry 279, 14240-14244.
110. Schneider G, Knight S, Andersson I, Brändén CI, Lindqvist Y, Lundqvist T. 1990b. Comparison of the crystal-structures of l2 and l8s8 rubisco suggests a functional-role for the small subunit. EMBO Journal 9, 2045-2050.
111. Schneider G, Lindqvist Y, Brändén CI, Lorimer G. 1986. Three-dimensional structure of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum at 2.9 Å resolution. EMBO Journal 5, 3409-3415.
112. Schneider G, Lindqvist Y, Lundqvist T. 1990a. Crystallographic refinement and structure of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum at 1.7-Å resolution. Journal of Molecular Biology 211, 989-1008.
113. Schreuder HA, Knight S, Curmi PMG, Andersson I, Cascio D, Brändén CI, Eisenberg D. 1993. Formation of the Rubisco active site by a disorder-order transition from the unactivated to the activated form. Proceedings of the National Academy of Sciences, USA 90, 9968-9972.
114. Seemann JR, Kobza J, Moore BD. 1990. Metabolism of 2-carboxyarabinitol 1-phosphate and regulation of ribulose-1,5-bisphosphate carboxylase activity. Photosynthesis Research 23, 119-130.
115. Shively JM, van Keulen G, Meijer WG. 1998. Something from almost nothing: carbon dioxide fixation in chemoautotrophs. Annual Review of Microbiology 52, 191-230.
116. Spreitzer RJ. 1993. Genetic dissection of Rubisco structure and function. Annual Review of Plant Physiology and Plant Molecular Biology 44, 411-434.
117. Spreitzer RJ. 1999. Ouestions about the complexity of chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase. Photosynthesis Research 60, 29-42.
118. Spreitzer RJ. 2003. Role of the Rubisco small subunit. Archives of Biochemistry and Biophysics 414, 141-149.
119. 2 specificity. Biochemistry 40, 5615-5621.
120. Spreitzer RJ, Salvucci ME. 2002. Rubisco: structure, regulatory interactions, and possibilities for a better enzyme. Annual Review of Plant Biology 53, 449-475.
121. Sugawara H, Yamamoto H, Shibata N, Inoue T, Okada S, Miyake C, Yokota A, Kai Y. 1999. Crystal structure of carboxylase reaction-oriented ribulose-1,5-bisphosphate carboxylase/oxygenase from a thermophilic red alga. Galdieria partita. Journal of Biological Chemistry 274, 15655-15661.
122. Tabita FR. 1999. Microbial ribulose-1,5-bisphosphate carboxylase/oxygenase: a different perspective. Photosynthesis Research 60, 1-28.
123. Tabita FR, Hanson TE, Li H, Satagopan S, Singh J, Chan S. 2007. Function, structure, and evolution of the Rubisco-like proteins and their Rubisco homologs. Microbiology and Molecular Biology Reviews 71, 576-599.
124. Tanaka S, Sawaya MR, Kerfeld CA, Yeates TO. 2007. Structure of Rubisco chaperone RbcX from Synechocystis sp. PCC6803. Acta Crystallographica D 63, 1109-1112.
125. Tapia O, Fidder H, Safont VS, Oliva M, Andres J. 2002. Enzyme catalysis: transition structures and quantum dynamical aspects: modeling rubisco's oxygenation and carboxylation mechanisms. International Journal of Quantum Chemistry 88, 154-166.
126. Tapia O, Oliva M, Safont VS, Andres J. 2000. A quantum-chemical study of transition structures for enolization and oxygenation steps catalysed by rubisco: on the role of magnesium and carbamylated Lys-201 in opening oxygen capture channel. Chemical Physics Letters 323, 29-34.
127. Taylor TC, Andersson I. 1996. Structural transitions during activation and ligand binding in hexadecameric Rubisco inferred from the crystal structure of the activated unliganded spinach enzyme. Nature Structural Biology 3, 95-101.
128. Taylor TC, Andersson I. 1997a. The structure of the complex between rubisco and its natural substrate ribulose-1,5-bisphosphate. Journal of Molecular Biology 265, 432-444.
129. Taylor TC, Andersson I. 1997b. Structure of a product complex of activated spinach ribulose-bisphosphate carboxylase. Biochemistry 36, 4041-4046.
130. Taylor TC, Backlund A, Spreitzer RJ, Björhall K, Andersson A. 2001. First crystal structure of Rubisco from a green alga: Chlamydomonas reinhardtii. Journal of Biological Chemistry 276, 48159-48164.
131. Taylor TC, Fothergill MD, Andersson I. 1996. A common structural basis for the inhibition of ribulose-1,5-bisphosphate carboxylase by 4-carboxyarabinitol-1,5-bisphosphate and xylulose-1,5-bisphosphate. Journal of Biological Chemistry 271, 32894-32899.
132. Tanaka S, Sawaya MR, Kerfeld CA, Yeates TO. 2007. Structure of Rubisco chaperone RbcX from Synechocystis sp. PCC6803. Acta Crystallographica D 63, 1109-1112.
133. Van Dyk DE, Schloss JV. 1986. Deuterium-isotope effects in the carboxylase reaction of ribulose-1,5-bisphosphate carboxylase oxygenase. Biochemistry 25, 5145-5156.
134. 2 pump. Photosynthesis Research 77, 191-207.
135. Whitman WB, Colletti C, Tabita FR. 1979. Activation of spinach ribulose bisphosphate carboxylase by pyridoxal-phosphate. FEBS Letters 101, 249-252.
136. Whitney SM, Shaw DC, Yellowlees D. 1995. Evidence that some dinoflagellates contain a ribulose-1, 5-bisphosphate carboxylase/oxygenase related to that of the α-proteobacteria, Proceedings of the Royal Society of London. B 259, 271-275.
137. Whitney SM, von Caemmerer S, Hudson GS, Andrews TJ. 1999. Directed mutation of the Rubisco large subunit of tobacco influences photorespiration and growth. Plant Physiology 121, 579-588.
138. Zhu GH, Jensen RG. 1991. Xylulose 1,5-bisphosphate synthesized by ribulose 1,5-bisphosphate carboxylase oxygenase during catalysis binds to decarbamylated enzyme. Plant Physiology 97, 1348-1353.