Mitochondrial DNA mapping of social-biological interactions in Brazilian Amazonian African-descendant populations

Genetics and Molecular Biology

Volumn 31, Issue 1, 2008, Pages 12-22

  Carvalho, Bruno Maia ^a   Bortolini, Maria Cátira ^b   dos Santos, Sidney Emanuel Batista ^a   Ribeiro dos Santos, Ândrea Kely Campos ^a  

^a FEDERAL UNIVERSITY OF PARÁ   (Brazil)

^b FEDERAL UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

Author keywords

African mtDNA; Amazon population; Amerindian mtDNA; HVS I

Indexed keywords

MITOCHONDRIAL DNA;

AFRICA; AMERICAN INDIAN; ARTICLE; BRAZIL; BRAZILIAN AMAZONIAN AFRICAN; EUROPE; GENE MAPPING; GENETIC LINKAGE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; HUMAN; INDIGENOUS PEOPLE; POPULATION GENETICS; SOCIAL INTERACTION; SOCIOBIOLOGY;

EID: 44649166878     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/S1415-47572008000100002     Document Type: Article

References (55)

1. Alves-Silva J, Santos MS, Guimarães PEM, Ferreira ACS, Bandelt HJ, Pena SDJ and Prado VF (2000) The ancestry of Brazilian mtDNA lineages. Am J Hum Genet 67:444-461.
2. Aris-Brosou S and Excoffier L (1996) The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphisms. Mol Biol Evol 13:494-504.
3. Acevedo R and Castro E (1998) Negros do Trombetas. Guardiães de Mata e Rios. Cejup, Belém, 262 pp.
4. Bailliet G, Rothhammer F, Carnese FR, Bravi CM and Bianchi NO (1994) Founder mitochondrial haplotypes in Amerindian populations. Am J Hum Genet 55:27-33.
5. Bandelt HJ, Forster P, Sykes BC and Richards MB (1995) Mitochondrial portraits of human populations using median networks. Genetics 141:743-753.
6. Bandelt HJ, Forster P and Röhl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48.
7. Bandelt HJ, Lahermo P, Richards M and Macaulay V (2001) Detecting errors in mtDNA data by phylogenetic analysis. Int J Legal Med 115:64-69.
8. Beleza S, Gusmão L, Amorim A, Carracedo A and Salas A (2005) The genetic legacy of western Bantu migrations. Hum Genet 117:366-375.
9. Bezerra-Neto JM (2001) Escravidão Negra na Amazânia (Séculos XVII-XIX). Paka-tatu, Belém, 127 pp.
10. Bortolini MC, Weimer TA, Salzano FM, Callegari-Jacques SM, Schneider H, Layrisse Z and Bonatto SL (1995) Evolutionary relationships between black South American and African populations. Hum Biol 67:547-559.
11. Bortolini MC, Zago MA, Salzano FM, Silva-Junior WA, Bonatto SL, Silva MC and Weimer TA (1997) Evolutionary and anthropological implications of mitochondrial DNA variation in African Brazilian populations. Hum Biol 69:141-159.
12. Bortolini MC, Silva-Junior WA, Weimer TA, Zago MA, Guerra DC, Schneider MP, Layrisse Z, Castellano HM and Salzano FM (1998) Protein and hypervariable tandem repeat diversity in eight African-derived South American populations: Inferred relationships do not coincide. Hum Biol 70:443-461.
13. Bortolini MC, Silva-Junior WA, Guerra DC, Remonatto G, Mirandola R, Hutz MH, Weimer TA, Silva MCBO, Zago MA and Salzano FM (1999) African-derived South American populations: A history of symmetrical and asymetrical matings according to sex revealed bybi- and uni-parental genetics markers. Am J Hum Biol 11:551-563.
14. Chen YS, Torroni A, Excoffier, Santachiara-Benerecetti AS and Wallace DC (1995) Analysis of mtDNA variation in African populations reveals the most ancient of all human continent-specific haplogroups. Am J Hum Genet 57:133-149.
15. Chen YS, Olckers A, Schurr TG, Kogelnik AM, Huoponen K and Wallace DC (2000) mtDNA variation in the South African Kung and Khwe- and their genetic relationships to other African populations. Am J Hum Genet 66:1362-1383.
16. Conrad RE (1985) Tumbeiros: O Tráfico de Escravos para o Brasil. Brasiliense, São Paulo, 219 pp.
17. Cruz E (1973) História do Pará. Governo do Estado do Pará, Belém, 210 pp.
18. Curtin PD (1969) The Atlantic Slave Trade: A Census. The University of Wisconsin, Milwaukee, 457 pp.
19. Guerreiro JF, Ribeiro-dos-Santos AKC, Santos EJM, Vallinoto ACR, Cayres-Vallinoto IMV, Aguiar GFS and Santos SEB (1999) Genetical-demographic data from two Amazonian populations composed of descendants of African slaves: Pacoval and Curiaú. Genet Mol Biol 22:163-167.
20. Hertzberg M, Mickleson KN, Serjeantson SW, Prior JF and Trent RJ (1989) An Asian-specific 9-bp deletion of mitochondrial DNA is frequently found in Polynesians. Am J Hum Genet 44:504-510.
21. Kivisild T, Reidla M, Metspalu E, Rosa A, Brehm A, Pennarun E, Parik J, Geberhiwot T, Usanga E and Villems R (2004) Ethiopian mitochondrial DNA heritage: Tracking gene flow across and around the gate of tears. Am J Hum Genet 75:752-770.
22. Klein HS (2002) As origens africanas dos escravos brasileiros. In: Pena SDJ (ed) Homo brasilis: Aspectos Genéticos, Lingüísticos, Históricos e Sócio-Antropológicos da Formação do Povo Brasileiro. Funpec, Ribeīrão Preto, pp 93-112.
23. Mateu F, Comas D, Calafell F, Perez-Lezaun A, Abade A and Bertranpetit J (1997) A tale of two islands: Population history and mitochondrial DNA sequence variation of Bioko and Sao Tome, Gulf of Guinea. Ann Hum Genet 61:507-518.
24. Mishmar D, Ruiz-Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Chen E, Brown MD et al. (2003) Natural selection shaped regional mtDNA variation in humans. Proc Natl Acad Sci USA 100:171-176.
25. Pante-de-Souza G, Mousinho-Ribeiro RC, Santos EMJ, Zago MA and Guerreiro JF (1998) Origin of the hemoglobin S gene in a northern Brazilian population: The combined effects of slave trade and internal migration. Genet Mol Biol 21:427-430.
26. Pereira L, Prata MJ and Amorim A (2000) Diversity of mtDNA lineages in Portugal: Not a genetic edge of European variation. Ann Hum Genet 64:491-506.
27. Pereira L, Macaulay V, Torroni A, Scozzari R, Prata MJ and Amorim A (2001) Prehistoric and historic traces in the mtDNA of Mozambique: Insights into the Bantu expansions and the slave trade. Ann Hum Genet 65:439-458.
28. Plaza S, Salas A, Calafell F, Corte-Real F, Bertranpetit J, Carracedo A and Comas D (2004) Insights into the western Bantu dispersal: mtDNA lineage analysis in Angola. Hum Genet 115:439-47.
29. Porto A (1938) Fundação da Cidade Paraense e Outros Aspectos da História do Brasil. Pongetti, Rio de Janeiro, 183 pp.
30. Rando JC, Pinto F, Gonzalez AM, Hernandez M, Larruga JM, Cabrera VM and Bandelt HJ (1998) Mitochondrial DNA analysis of northwest African populations reveals genetic exchanges with European, near-eastern, and sub-Saharan populations. Ann Hum Genet 62:531-550.
31. Ribeiro D (1995) O Povo Brasileiro. A Formação e o Sentido do Brasil. Schwarcz, São Paulo, 470 pp.
32. Ribeiro-dos-Santos AKC, Pereira JM, Lobato MR, Carvalho BM, Guerreiro JF and Santos SEB (2002) Dissimilarities in the process of formation of Curiau, a semi-isolated Afro-Brazilian population of the Amazon region. Am J Hum Biol 14:440-447.
33. Ribeiro-dos-Santos AKC, Carvalho BM, Feio-dos-Santos AC and Santos SEB (2007) Nucleotide variability of HV-I in Afro-descendents populations of the Brazilian Amazon Region. Forensic Sci Int 167:77-80.
34. Rosa A, Brehm A, Kivisild T, Metspalu E and Villems R (2004) MtDNA profile of West Africa Guineans: Towards a better understanding of the Senegambia region. Ann Hum Genet 68:340-352.
35. Rozas J, Sánchez-Delbarrio JC, Messenguer X and Rosas R (2003) DNA Polymorphism analysis by the coalescent and other methods. Bioinformatics 19:2496-2497.
36. Salas A, Richards M, De La Fe T, Lareu MV, Sobrino B, Sánchez-Diz P, Macaulay V and Carracedo A (2002) The making of the African mtDNA landscape. Am J Hum Genet 71:1082-1111.
37. Salas A, Richards M, Lareu MV, Scozzari R, Coppa A, Torroni A, Macaulay V and Carracedo A (2004) The African diaspora: Mitochondrial DNA and the Atlantic slave trade. Am J Hum Genet 74:454-465.
38. Salles V (1988) O Negro no Pará sob o Regime de Escravidão. SECULT, Belém, 342 pp.
39. Salzano FM and Freire-Maia N (1970) Problems in Human Biology: A Study of Brazilian Populations. Wayne State University Press, Detroit, 200 pp.
40. Sambrook J, Fritsch EF and Maniatis T (1989) Molecular Cloning: A Laboratory Manual. New York, Cold Spring Harbor Press.
41. Santos SEB, Ribeiro-dos-Santos AKC, Meyer D and Zago MA (1996) Multiple founder haplotypes of mitochondrial DNA in Amerindians revealed by RFLP and sequencing. Ann Hum Genet 60:305-319.
42. Santos SEB, Rodrigues JD, Ribeiro-dos-Santos AKC and Zago MA (1999) Differential contribution of indigenous men and women to the formation of an urban population in the Amazon region as revealed by mtDNA and Y-DNA. Am J Phys Anthropol 109:175-180.
43. Schneider H, Guerreiro JF, Santos SEB, Weimer TA, Schneider MPC and Salzano FM (1987). Isolate breakdown in Amazonia: The blacks of the Trombetas river. Braz J Genet 10:565-574.
44. Schneider S, Roessli D and Excoffier L (2000) Arlequin: A Software for Population Genetic Data. Genetics and Biometry Laboratory, University of Geneva, Switzerland.
45. Shen P, Lavi T, Kivisild T, Chou V, Sengun D, Gefel D, Shpirer I, Woolf E, Hillel J, Feldman MW et al. (2004) Reconstruction of patrilineages and matrilineages of Samaritans and other Israeli populations from Y-chromosome and mitochondrial DNA sequence variation. Hum Mutat 24:248-260.
46. Silva-Junior WA, Bortolini MC, Schneider MP, Marredo A, Krishnamoorthy R and Zago MA (2006) mtDNA haplogroup analysis of Black Brazilian and Sub-Saharan populations: Implications for the Atlantic slave trade. Hum Biol 78:29-41.
47. Torres MM, Bravi CM, Bortolini MC, Duque C, Callegari-Jacques S, Ortiz D, Bedoya G, Groot de Restrepo H and Ruiz-Linares A (2006) A revertant of the major founder Native American haplogroup C common in populations from northern South America. Am J Hum Biol 18:59-65.
48. Torroni A, Schurr TG, Yang CC, Szathmary EJ, Williams RC, Schanfield MS, Troup GA, Knowler WC, Lawrence DN and Weiss KM (1992) Native American mitochondrial DNA analysis indicates that the Amerind and the Nadene populations were founded by two independent migrations. Genetics 130:153-162.
49. Torroni A, Schurr TG, Cabell MF, Brown MD, Neel JV, Larsen M, Smith DG, Vullo CM and Wallace DC (1993) Asian affinities and continental radiation of the four founding Native American mtDNAs. Am J Hum Genet 53:563-590.
50. Torroni A, Huoponen K, Francalacci P, Petrozzi M, Morelli L, Scozzari R, Obinu D, Savontaus ML and Wallace DC (1996) Classification of European mtDNAs from an analysis of three European populations. Genetics 144:1835-1850.
51. Vigilant L, Stoneking M, Harpending H, Hawkes K and Wilson AC (1991) African populations and the evolution of human mitochondrial DNA. Science 253:1503-1507.
52. Ward RH, Frazier BL, Dew-Jager K and Pääbo S (1991) Extensive mitochondrial diversity within a single Amerindian tribe. Proc Natl Acad Sci USA 88:8720-8724.
53. Watson E, Bauer K, Aman R, Weiss G, Von Heaseler A and Pääbo S (1996) mtDNA sequence diversity in Africa. Am J Hum Genet 59:437-444.
54. Watson E, Forster P, Richards M and Bandelt HJ (1997) Mitochondrial footprints of human expansions in Africa. Am J Hum Genet 61:691-704.
55. Yao YG, Kong QP, Bandelt HJ, Kivisild T and Zhang YP (2002) Phylogeographic differentiation of mitochondrial DNA in Han Chinese. Am J Hum Genet 70:635-651.