A revertant of the major founder Native American haplogroup C common in populations from Northern South America

American Journal of Human Biology

Volumn 18, Issue 1, 2006, Pages 59-65

  Torres, Maria M ^a   Bravi, Claudio M ^b   Bortolini, Maria Cátira ^c   Duque, Constanza ^d   Callegari Jacques, Sidia ^c   Ortiz, Daniel ^d   Bedoya, Gabriel ^d   De Restrepo, Helena Groot ^f   Ruiz Linares, Andrés ^d,e  

^a UNIVERSIDAD DE LOS ANDES   (Colombia)

^b Instituto Multidisciplinario de Biologia Celular   (Argentina)

^c FEDERAL UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

^d UNIVERSIDAD DE ANTIOQUIA   (Colombia)

^e UNIVERSITY COLLEGE LONDON   (United Kingdom)

^f NONE

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

AMERICAN INDIAN; ARTICLE; GENE FREQUENCY; GENE MUTATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; GEOGRAPHIC INFORMATION SYSTEM; HAPLOTYPE; HUMAN; NULL ALLELE; PHYLOGENY; POLYMERASE CHAIN REACTION; POPULATION GENETICS; POPULATION RESEARCH; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVERTANT; SEQUENCE ANALYSIS; SOUTH AMERICA;

COLOMBIA; DNA, MITOCHONDRIAL; FOUNDER EFFECT; GENETICS, POPULATION; HAPLOTYPES; HUMANS; INDIANS, SOUTH AMERICAN; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SEQUENCE ANALYSIS, DNA;

EID: 31344434219     PISSN: 10420533     EISSN: 15206300     Source Type: Journal    
DOI: 10.1002/ajhb.20461     Document Type: Article

References (33)

1. Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N. 1999. Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23(2):147
2. Bailliet G, Rothhammer F, Carnese FR, Bravi CM, Bianchi NO. 1994. Founder mitochondrial haplotypes in Amerindian populations. Am J Hum Genet 55(1):27-33.
3. Ballinger SW, Schurr TG, Torroni A, Gan YY, Hodge JA, Hassan K, Chen KH, Wallace DC. 1992. Southeast Asian mitochondrial DNA analysis reveals genetic continuity of ancient mongoloid migrations. Genetics 130:139-152.
4. Bandelt HJ, Forster P, Röhl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16(1):37-48.
5. Bandelt HJ, Herrnstadt C, Yao YG, Kong QP, Kivisild T, Rengo C, Scozzari R, Richards M, Villems R, Macaulay V, Howell N, Torroni A, Zhang YP. 2003.Identification of Native American founder mtDNAs through the analysis of complete mtDNA sequences: some caveats. Ann Hum Genet 67(6):512-524.
6. Bolnick DA, Shook BA, Campbell L, Goddard I. 2004. Problematic use of Greenberg's linguistic classification of the Americas in studies of Native American genetic variation. Am J Hum Genet 75(3):519-522.
7. Bortolini MC, Salzano FM, Thomas MG, Stuart S, Nasanen SP, Bau CH, Hutz MH, Layrisse Z, Petzl-Erler ML, Tsuneto LT, Hill K, Hurtado AM, Castro-de-Guerra D, Torres MM, Groot H, Michalski R, Nymadawa P, Bedoya G, Bradman N, Labuda D, Ruiz-Linares A. 2003. Y-chromosome evidence for differing ancient demographic histories in the Americas. Am J Hum Genet 73(3):524-539.
8. Campbell L. 1997. American Indian languages: the historical linguistics of Native America. New York: Oxford University Press.
9. Cavalli-Sforza LL, Feldman MW. 2003. The application of molecular genetic approaches to the study of human evolution. Nat Genet 33(Suppl):266-275.
10. Cavalli-Sforza LL, Menozzi P, Piazza A. 1994. The history and geography of human genes. Princeton, NJ: Princeton University Press.
11. Crawford MH. 1998. The origins of Native Americans. Cambridge, England: Cambridge University Press.
12. Easton RD, Merriwether DA, Crews DE, Ferrell RE. 1996. mtDNA variation in the Yanomami: evidence for additional New World founding lineages. Am J Hum Genet 59(1):213-225
13. Forster P, Harding R, Torroni A, Bandelt HJ. 1996. Origin and evolution of Native American mtDNA variation: a reappraisal. Am J Hum Genet 59(4): 935-945.
14. Ginther C, Corach D, Penacino GA, Rey JA, Carnese FR, Hutz MH, Anderson A, Just J, Salzano FM, King MC. 1993. Genetic variation among the Mapuche Indians from the Patagonian region of Argentina: mitochondrial DNA sequence variation and allele frequencies of several nuclear genes. In: Pena SDJ, Chakraborty R, Epplen J, Jeffreys A, editors. DNA fingerprinting: the state of the science. Basel: Birkhauser. p 211-219.
15. Greenberg JH. 1987. Language in the Americas. Stanford, CA: Stanford University Press.
16. Horai S, Kondo R, Nakagawa-Hattori Y, Hayashi S, Sonoda S, Tajima K. 1993. Peopling of the Americas, founded by four major lineages of mitochondrial DNA. Mol Biol Evol 10:23-47.
17. Hunley K, Long JC. 2005. Gene flow across linguistic boundaries in Native North American populations. Proc Natl Acad Sci U S A 102:1312-1317.
18. Keyeux G, Rodas C, Gelvez N, Carter D. 2002. Possible migration routes into South America deduced from mitochondrial DNA studies in Colombian Amerindian populations. Hum Biol 74(2):211-233.
19. Kolman CJ, Bermingham E, Cooke R, Ward RH, Arias TD, Guionneau-Sinclair F. 1995. Reduced mtDNA diversity in the Ngobe Amerinds of Panama. Genetics 140(1):275-283.
20. Kolman CJ, Sambuughin N, Bermingham E. 1996. Mitochondrial DNA analysis of Mongolian populations and implications for the origin of New World founders. Genetics 142(4):1321-1334.
21. Merriwether DA, Ferrell RE. 1996. The four founding lineage hypothesis for the New World: a critical reevaluation. Mol Phylogenet Evol 5(1):241-246.
22. Merriwether DA, Kemp BM, Crews DE, Neel JV. 2000. Gene flow and genetic variation in the Yanomama as revealed by mtDNA. In: Renfrew C, editor. America past, America present: genes and languages in the Americas and beyond. Cambridge, England: McDonald Institute for Archaeological Research.
23. Moreno MER, Agudelo LMC, Aguablanca E. 1993. Geografica humana de Colombia: region de Orinoquia. Tomo III. Vol 2. Primera edicion. Bogota: Instituto Colombiano de Cultura Hispanica.
24. Rodas C, Gelvez N, Keyeux G. 2003. Mitochondrial DNA studies show asymmetrical Amerindian admixture in Afro-Colombian and Mestizo populations. Hum Biol 75(1):13-30.
25. Ruhlen M. 1991. A guide to the world's languages. Stanford, CA: Stanford University Press.
26. Schurr TG, Sukernik RI, Starikovskaya YB, Wallace DC. 1999. Mitochondrial DNA variation in Koryaks and Itel'men: population replacement in the Okhotsk Sea-Bering Sea region during the Neolithic. Am J Phys Anthropol 108:1-39.
27. Santos SE, Rodrigues JD, Ribeiro-dos-Santos AY, Zago MA. 1999. Differential contribution of indigenous men and women to the formation of an urban population in the Amazon region as revealed by mtDNA and Y-DNA. Am J Phys Anthropol 109(2):175-180.
28. Thompson EA, Neel JV. 1996. Private polymorphisms: How many? How old? How useful for genetic taxonomies? Mol Phylogenet Evol 5(1):220-231.
29. Torroni A, Miller JA, Moore LG, Zamudio S, Zhuang J, Droma T, Wallace DC. 1994. Mitochondrial DNA analysis in Tibet: implications for the origin of the Tibetan population and its adaptation to high altitude. Am J Phys Anthropol 93:189-199.
30. Torroni A, Schurr TG, Cabell MF, Brown MD, Neel JV, Larsen M, Smith DG, Vullo CM, Wallace DC. 1993a. Asian affinities and continental radiation of the four founding Native American mtDNAs. Am J Hum Genet 53:563-590.
31. Torroni A, Sukernik RI, Schurr TG, Starikovskaya YB, Cabell MF, Crawford MH, Comuzzie AG, Wallace DC. 1993b. mtDNA variation of aboriginal Siberians reveals distinct genetic affinities with Native Americans. Am J Hum Genet 53:591-608.
32. Torroni A, Schurr TG, Yang CC, Szathmary EJ, Williams RC, Schanfield MS, Troup GA, Knowler WC, Lawrence DN, Weiss KM. 1992. Native American mitochondrial DNA analysis indicates that the Amerind and the Nadene populations were founded by two independent migrations. Genetics 130(1):153-162.
33. Ward RH, Frazier BL, Dew-Jager K, Pääbo S. 1991. Extensive mitochondrial diversity within a single Amerindian tribe. Proc Natl Acad Sci USA 88: 8720-8724.