The genetic legacy of western Bantu migrations

Human Genetics

Volumn 117, Issue 4, 2005, Pages 366-375

  Beleza, Sandra ^a,b   Gusmão, Leonor ^a   Amorim, António ^a   Carracedo, Angel ^b   Salas, Antonio ^b  

^a UNIVERSITY OF PORTO   (Portugal)

^b UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

AFRICA SOUTH OF THE SAHARA; ARTICLE; CHROMOSOME ANALYSIS; COMPUTER SYSTEM; CONTROLLED STUDY; DATA BASE; DNA POLYMORPHISM; FEMALE; GENE FREQUENCY; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; HUMAN; MALE; MIGRATION; PHYLOGENY; PRIORITY JOURNAL; RACE DIFFERENCE; Y CHROMOSOME; Y CHROMOSOME LINKAGE;

AFRICA; CHROMOSOMES, HUMAN, Y; CLUSTER ANALYSIS; DATABASES, GENETIC; DNA, MITOCHONDRIAL; EMIGRATION AND IMMIGRATION; ETHNIC GROUPS; GENETICS, POPULATION; GENOTYPE; HAPLOTYPES; HUMANS; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; VARIATION (GENETICS);

EID: 23944480656     PISSN: 03406717     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00439-005-1290-3     Document Type: Article

References (44)

1. Alves-Silva J, da Silva Santos M, Guimaraes PE, Ferreira AC, Bandelt H-J, Pena SD, Prado VF (2000) The ancestry of Brazilian mtDNA lineages. Am J Hum Genet 67:444-461 10.1086/303004
2. Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N (1999) Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23:147 10.1038/13779
3. Bakel MA (1981) The "Bantu" expansion: Demographic models. Curr Anth 22:688-691 10.1086/202753
4. Bandelt HJ, Forster P, Sykes BC, Richards MB (1995) Mitochondrial portraits of human populations using median networks. Genetics 141:743-53 1:STN:280:BymC3cbmtFM%3D
5. Bandelt HJ, Forster P, Röhl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48 1:CAS:528:DyaK1MXjvVGltA%3D%3D
6. Bandelt HJ, Alves-Silva J, Guimarães PE, Santos MS, Brehm A, Pereira L, Coppa A, Larruga JM, Rengo C, Scozzari R, Torroni A, Prata MJ, Amorim A, Prado VF, Pena SD (2001) Phylogeography of the human mitochondrial haplogroup L3e: A snapshot of African prehistory and Atlantic slave trade. Ann Hum Genet 65:549-563 10.1046/ j.1469-1809.2001.6560549.x
7. Beleza S, Alves C, González-Neira A, Lareu M, Amorim A, Carracedo A, Gusmão L (2003) Extending STR markers in Y-chromosome haplotypes. Int J Legal Med 117:27-33 1:STN:280:DC%2BD3s%2FotVSgsg%3D%3D
8. Carvalho-Silva DR, Santos FR, Rocha J, Pena SD (2001) The phylogeography of Brazilian Y-chromosome lineages. Am J Hum Genet 68:281-286 10.1086/ 316931
9. LL Cavalli-Sforza P Menozzi A Piazza 1994 History and geography of human genes Princeton University Press Princeton
10. Chen YS, Olckers A, Schurr TG, Kogelnik AM, Huoponen K, Wallace DC (2000) MtDNA variation in the South African Kung and Khwe and their genetic relationships to other African populations. Am J Hum Genet 66:1362-1383 10.1086/302848
11. Coia V, Caglia A, Arredi B, Donati F, Santos FR, Pandya A, Taglioli L, Paoli G, Pascali V, Destro-Bisol G, Tyler-Smith C (2004) Binary and microsatellite polymorphisms of the Y-chromosome in the Mbenzele pygmies from the Central African Republic. Am J Human Biol 16:57-67 10.1002/ ajhb.10236
12. Cruciani F, Santolamazza P, Shen P, Macaulay V, Moral P, Olckers A, Modiano D, Holmes S, Destro-Bisol G, Coia V, Wallace DC, Oefner PJ, Torroni A, Cavalli-Sforza LL, Scozzari R, Underhill PA (2002) A back migration from Asia to sub-Saharan Africa is supported by high-resolution analysis of human Y-chromosome haplotypes. Am J Hum Genet 70:1197-1214 10.1086/340257
13. Destro-Bisol G, Coia V, Boschi I, Verginelli F, Caglia A, Pascali V, Spedini G, Calafell F (2004) The analysis of variation of mtDNA hypervariable region 1 suggests that Eastern and Western Pygmies diverged before the Bantu expansion. Am Nat 163:212-226 10.1086/381405
14. Gonçalves R, Rosa A, Freitas A, Fernandes A, Kivisild T, Villems R, Brehm A (2003) Y-chromosome lineages in Cabo Verde Islands witness the diverse geographic origin of its first male settlers. Hum Genet 113:467-472 10.1007/s00439-003-1007-4
15. Gusma̧o L, González-Neira A, Alves C, Lareu M, Costa S, Amorim A, Carracedo A (2002) Chimpanzee homologous of human Y specific STRs. A comparative study and a proposal for nomenclature. Forensic Sci Int 126:129-136 10.1016/S0379-0738(02)00046-4
16. Helgason A, Nicholson G, Stefansson K, Donnelly P (2003) A reassessment of genetic diversity in Icelanders: Strong evidence from multiple loci for relative homogeneity caused by genetic drift. Ann Hum Genet 67:281-297 10.1046/j.1469-1809.2003.00046.x
17. Herrnstadt C, Elson JL, Fahy E, Preston G, Turnbull DM, Anderson C, Ghosh SS, Olefsky JM, Beal MF, Davis RE, Howell N (2002) Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences for the major African, Asian, and European haplogroups. Am J Hum Genet 70:1152-1171 10.1086/339933
18. Hiernaux J (1968) Bantu expansion: The evidence from physical anthropology confronted with linguistic and archaeological evidence. J Afr Hist 9:505-515
19. Hurles ME, Veitia R, Arroyo E, Armenteros M, Bertranpetit J, Pérez-Lezaun A, Bosch E, Shlumukova M, Cambon-Thomsen A, McElreavey K, Lopez De Munain A, Röhl A, Wilson IJ, Singh L, Pandya A, Santos FR, Tyler-Smith C, Jobling MA (1999) Recent male-mediated gene flow over a linguistic barrier in Iberia, suggested by analysis of a Y-chromosomal DNA polymorphism. Am J Hum Genet 65:1437-1448 10.1086/ 302617
20. Ingman M, Kaessmann H, Pääbo S, Gyllensten U (2000) Mitochondrial genome variation and the origin of modern humans. Nature 408:708-713 10.1038/35047064
21. Jobling M, Tyler-Smith C (2003) The human Y-chromosome: An evolutionary marker comes of age. Nat Rev Genet 4:598-612 1:CAS:528:DC%2BD3sXlvFaqt74%3D
22. Knight A, Underhill PA, Mortensen HM, Zhivotovsky LA, Lin AA, Henn BM, Louis D, Ruhlen M, Mountain JL (2003) African Y-chromosome and mtDNA divergence provides insight into the history of click languages. Curr Biol 13:464-473 10.1016/S0960-9822(03)00130-1
23. Lareu MV, Phillips CP, Carracedo A, Lincoln PJ, Syndercombe Court D, Thomson JA (1994) Investigation of the STR locus HUMTH01 using PCR and two electrophoresis formats: UK and Galician Caucasian population surveys and usefulness in paternity investigations. Forensic Sci Int 66:41-52 10.1016/0379-0738(94)90318-2
24. Maca-Meyer N, González AM, Larruga JM, Flores C, Cabrera VM (2001) Major genomic mitochondrial lineages delineate early human expansions. BMC Genet 2:13 10.1186/1471-2156-2-13
25. JL Newman 1995 The peopling of Africa: A geographic interpretation Yale University Press New Haven
26. Pereira L, Macaulay V, Torroni A, Scozzari R, Prata MJ, Amorim A (2001) Prehistoric and historic traces in the mtDNA of Mozambique: Insights into the Bantu expansions and the slave trade. Ann Hum Genet 65:439-458 10.1046/j.1469-1809.2001.6550439.x
27. Pereira L, Gusmão L, Alves C, Amorim A, Prata MJ (2002) Bantu and European Y-lineages in Sub-Saharan Africa. Ann Hum Genet 66:369-378 10.1046/j.1469-1809.2002.00130.x
28. DW Phillipson 1993 African archaeology Cambridge University Press Cambridge
29. Plaza S, Salas A, Calafell F, Côrte-Real F, Bertranpetit J, Carracedo A, Comas D (2004) Insights into the western Bantu dispersal: mtDNA lineage analysis in Angola. Hum Genet 115:439-447 10.1007/ s00439-004-1164-0
30. Richards M, Macaulay V, Hill Catherine H, Carracedo A, Salas A (2004) The archaeogenetics of the dispersals of the Bantu-speaking peoples. In: Jones M (ed) Traces of ancestry: Studies in honour of Colin Renfrew. McDonald Institute for Archaeological Research Monographs, Cambridge
31. Rosser ZH, Zerjal T, Hurles ME, Adojaan M, Alavantic D, Amorim A, Amos W et al. (2000) Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language. Am J Hum Genet 67:1526-1543
32. AJ Russell-Wood 1998 The Portuguese empire, 1415-1808: A world on the move The John Hopkins University Press London
33. Salas A, Richards M, De la Fé T, Lareu MV, Sobrino B, Sánchez-Diz P, Macaulay V, Carracedo A (2002) The making of the African mtDNA landscape. Am J Hum Genet 71:1082-1111
34. Salas A, Richards M, Lareu MV, Scozzari R, Coppa A, Torroni A, Macaulay V, Carracedo A (2004a) The African diaspora: Mitochondrial DNA and the Atlantic slave trade. Am J Hum Genet 74:454-465 10.1086/382194
35. Salas A, Torroni A, Richards M, Quintana-Murci L, Hill C, Macaulay V, Carracedo A (2004b) Reply to Bortolini MC, Da Silva WA, Zago MA, Elion J, Krishnamoorthy R, Gonçalves VF, Pena SDJ (2004b) The phylogeography of mtDNA haplogroup L3g in Africa and the Atlantic slave trade. Am J Hum Genet 75:524-526 10.1086/423824
36. Schneider S, Roessli D, Excoffier L (2000) Arlequin: A software for population genetics data analysis, ver 2.000. Genetics and Biometry Lab, Dept. of Anthropology, University of Geneva
37. Semino O, Santachiara-Benerecetti AS, Falaschi F, Cavalli-Sforza LL, Underhill PA (2002) Ethiopians and Khoisan share the deepest clades of the human Y-chromosome phylogeny. Am J Hum Genet 70:265-268
38. Tishkoff S, Williams S (2002) Genetic analysis of African populations: human evolution and complex disease. Nat Rev Genet 3:611-621 1:CAS:528:DC%2BD38XlslamsLk%3D
39. Torroni A, Rengo C, Guida V, Cruciani F, Sellitto D, Coppa A, Calderon FL, Simionati B, Valle G, Richards M, Macaulay V, Scozzari R (2001) Do the four clades of the mtDNA haplogroup L2 evolve at different rates? Am J Hum Genet 69:1348-1356 10.1086/324511
40. Trovoada MJ, Pereira L, Gusmão L, Abade A, Amorim A, Prata MJ (2004) Pattern of mtDNA variation in three populations from Sao Tome e Principe. Ann Hum Genet 68:40-54 10.1046/j.1529-8817.2003.00070.x
41. Underhill PA, Shen P, Lin AA, Jin L, Passarino G, Yang WH, Kauffman E, Bonne-Tamir B, Bertranpetit J, Francalacci P, Ibrahim M, Jenkins T, Kidd JR, Mehdi SQ, Seielstad MT, Wells RS, Piazza A, Davis RW, Feldman MW, Cavalli-Sforza LL, Oefner PJ (2000) Y-chromosome sequence variation and the history of human populations. Nat Genet 26:358-361 10.1038/81685
42. Underhill PA, Passarino G, Lin AA, Shen P, Mirazon Lahr M, Foley RA, Oefner PJ, Cavalli-Sforza LL (2001) The phylogeography of Y-chromosome binary haplotypes and the origins of modern human populations. Ann Hum Genet 65:43-62 1:STN:280:DC%2BD3MzltVagsw%3D%3D
43. Vansina (1984) Western Bantu expansion. J Afr Hist 25:129-145
44. Watson E, Forster P, Richards M, Bandelt H-J (1997) Mitochondrial footprints of human expansions in Africa. Am J Hum Genet 61:691-704 1:STN:280:ByiH28rmtFE%3D