-
1
-
-
0001107378
-
Taxonomy and evolutionary relationships of flaviviruses
-
Gubler D.J., and Kuno G. (Eds), CAB International, New York
-
Westaway E.G., and Blok J. Taxonomy and evolutionary relationships of flaviviruses. In: Gubler D.J., and Kuno G. (Eds). Dengue and Dengue Hemorrhagic Fever (1997), CAB International, New York 147-173
-
(1997)
Dengue and Dengue Hemorrhagic Fever
, pp. 147-173
-
-
Westaway, E.G.1
Blok, J.2
-
2
-
-
34249799052
-
Progress for dengue virus diseases. Towards the NS2B-NS3pro inhibition for a therapeutic-based approach
-
Melino S., and Paci M. Progress for dengue virus diseases. Towards the NS2B-NS3pro inhibition for a therapeutic-based approach. FEBS J. 274 (2007) 2986-3002
-
(2007)
FEBS J.
, vol.274
, pp. 2986-3002
-
-
Melino, S.1
Paci, M.2
-
3
-
-
0031898959
-
Virus-encoded proteinases of the Flaviviridae
-
Ryan M.D., Monaghan S., and Flint M. Virus-encoded proteinases of the Flaviviridae. J. Gen. Virol. 79 (1998) 947-959
-
(1998)
J. Gen. Virol.
, vol.79
, pp. 947-959
-
-
Ryan, M.D.1
Monaghan, S.2
Flint, M.3
-
4
-
-
0025116324
-
Flavivirus genome organization, expression, and replication
-
Chambers T.J., Hahn C.S., Galler R., and Rice C.M. Flavivirus genome organization, expression, and replication. Annu. Rev. Microbiol. 44 (1990) 649-688
-
(1990)
Annu. Rev. Microbiol.
, vol.44
, pp. 649-688
-
-
Chambers, T.J.1
Hahn, C.S.2
Galler, R.3
Rice, C.M.4
-
5
-
-
0034616194
-
Purified NS2B/NS3 serine protease of dengue virus type 2 exhibits cofactor NS2B dependence for cleavage of substrates with dibasic amino acids in vitro
-
Yusof R., Clum S., Wetzel M., Murthy H.M., and Padmanabhan R. Purified NS2B/NS3 serine protease of dengue virus type 2 exhibits cofactor NS2B dependence for cleavage of substrates with dibasic amino acids in vitro. J. Biol. Chem. 275 (2000) 9963-9969
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 9963-9969
-
-
Yusof, R.1
Clum, S.2
Wetzel, M.3
Murthy, H.M.4
Padmanabhan, R.5
-
6
-
-
0036037499
-
Expression, purification, and characterization of the RNA 5′-triphosphatase activity of dengue virus type 2 nonstructural protein 3
-
Bartelma G., and Padmanabhan R. Expression, purification, and characterization of the RNA 5′-triphosphatase activity of dengue virus type 2 nonstructural protein 3. Virology 299 (2002) 122-132
-
(2002)
Virology
, vol.299
, pp. 122-132
-
-
Bartelma, G.1
Padmanabhan, R.2
-
7
-
-
37349023165
-
Crystal structure of the NS3 protease-helicase from dengue virus
-
Luo D., Xu T., Hunke C., Grüber G., Vasudevan S.G., and Lescar J. Crystal structure of the NS3 protease-helicase from dengue virus. J. Virol. 82 (2008) 173-183
-
(2008)
J. Virol.
, vol.82
, pp. 173-183
-
-
Luo, D.1
Xu, T.2
Hunke, C.3
Grüber, G.4
Vasudevan, S.G.5
Lescar, J.6
-
8
-
-
0033605260
-
Dengue virus NS3 serine protease. Crystal structure and insights into interaction of the active site with substrates by molecular modeling and structural analysis of mutational effects
-
Murthy H.M., Clum S., and Padmanabhan R. Dengue virus NS3 serine protease. Crystal structure and insights into interaction of the active site with substrates by molecular modeling and structural analysis of mutational effects. J. Biol. Chem. 274 (1999) 5573-5580
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 5573-5580
-
-
Murthy, H.M.1
Clum, S.2
Padmanabhan, R.3
-
9
-
-
0027499688
-
Deletion analysis of dengue virus type 4 nonstructural protein NS2B: identification of a domain required for NS2B-NS3 protease activity
-
Falgout B., Miller R.H., and Lai C.J. Deletion analysis of dengue virus type 4 nonstructural protein NS2B: identification of a domain required for NS2B-NS3 protease activity. J. Virol. 67 (1993) 2034-2042
-
(1993)
J. Virol.
, vol.67
, pp. 2034-2042
-
-
Falgout, B.1
Miller, R.H.2
Lai, C.J.3
-
10
-
-
10044278380
-
Identification of residues in the dengue virus type 2 NS2B cofactor that are critical for NS3 protease activation
-
Niyomrattanakit P., Winoyanuwattikun P., Chanprapaph S., Angsuthanasombat C., Panyim S., and Katzenmeier G. Identification of residues in the dengue virus type 2 NS2B cofactor that are critical for NS3 protease activation. J. Virol. 78 (2004) 13708-13716
-
(2004)
J. Virol.
, vol.78
, pp. 13708-13716
-
-
Niyomrattanakit, P.1
Winoyanuwattikun, P.2
Chanprapaph, S.3
Angsuthanasombat, C.4
Panyim, S.5
Katzenmeier, G.6
-
11
-
-
34247625945
-
Structural evidence for regulation and specificity of flaviviral proteases and evolution of the Flaviviridae fold
-
Aleshin A.E., Shiryaev S.A., Strongin A.Y., and Liddington R.C. Structural evidence for regulation and specificity of flaviviral proteases and evolution of the Flaviviridae fold. Protein Sci. 16 (2007) 795-806
-
(2007)
Protein Sci.
, vol.16
, pp. 795-806
-
-
Aleshin, A.E.1
Shiryaev, S.A.2
Strongin, A.Y.3
Liddington, R.C.4
-
12
-
-
33745025763
-
Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus
-
Erbel P., Schiering N., D'Arcy A., Renatus M., Kroemer M., Lim S.P., Yin Z., Keller T.H., Vasudevan S.G., and Hommel U. Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus. Nat. Struct. Mol. Biol. 13 (2006) 372-373
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 372-373
-
-
Erbel, P.1
Schiering, N.2
D'Arcy, A.3
Renatus, M.4
Kroemer, M.5
Lim, S.P.6
Yin, Z.7
Keller, T.H.8
Vasudevan, S.G.9
Hommel, U.10
-
13
-
-
23344446921
-
Functional profiling of recombinant NS3 proteases from all four serotypes of dengue virus using tetrapeptide and octapeptide substrate libraries
-
Li J., Lim S.P., Beer D., Patel V., Wen D., Tumanut C., Tully D.C., Williams J.A., Jiricek J., Priestle J.P., Harris J.L., and Vasudevan S.G. Functional profiling of recombinant NS3 proteases from all four serotypes of dengue virus using tetrapeptide and octapeptide substrate libraries. J. Biol. Chem. 280 (2005) 28766-28774
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 28766-28774
-
-
Li, J.1
Lim, S.P.2
Beer, D.3
Patel, V.4
Wen, D.5
Tumanut, C.6
Tully, D.C.7
Williams, J.A.8
Jiricek, J.9
Priestle, J.P.10
Harris, J.L.11
Vasudevan, S.G.12
-
14
-
-
33745516142
-
Probing the substrate specificity of the dengue virus type 2 NS3 serine protease by using internally quenched fluorescent peptides
-
Niyomrattanakit P., Yahorova S., Mutule I., Mutulis F., Petrovska R., Prusis P., Katzenmeier G., and Wikberg J.E. Probing the substrate specificity of the dengue virus type 2 NS3 serine protease by using internally quenched fluorescent peptides. Biochem. J. 397 (2006) 203-211
-
(2006)
Biochem. J.
, vol.397
, pp. 203-211
-
-
Niyomrattanakit, P.1
Yahorova, S.2
Mutule, I.3
Mutulis, F.4
Petrovska, R.5
Prusis, P.6
Katzenmeier, G.7
Wikberg, J.E.8
-
15
-
-
33846106926
-
Substrate specificity of recombinant dengue 2 virus NS2B-NS3 protease: influence of natural and unnatural basic amino acids on hydrolysis of synthetic fluorescent substrates
-
Gouvea I.E., Izidoro M.A., Judice W.A.S., Cezari M.H.S., Caliendo G., Santagada V., dos Santos C.N.D., Queiroz M.H., Juliano M.A., Young P.R., Fairlie D.P., and Juliano L. Substrate specificity of recombinant dengue 2 virus NS2B-NS3 protease: influence of natural and unnatural basic amino acids on hydrolysis of synthetic fluorescent substrates. Arch. Biochem. Biophys. 457 (2007) 187-196
-
(2007)
Arch. Biochem. Biophys.
, vol.457
, pp. 187-196
-
-
Gouvea, I.E.1
Izidoro, M.A.2
Judice, W.A.S.3
Cezari, M.H.S.4
Caliendo, G.5
Santagada, V.6
dos Santos, C.N.D.7
Queiroz, M.H.8
Juliano, M.A.9
Young, P.R.10
Fairlie, D.P.11
Juliano, L.12
-
16
-
-
0001784128
-
Epidemiology of dengue and dengue hemorrhagic fever
-
Gubler D.J., and Kuno G. (Eds), CAB International, New York
-
Halstead S.B. Epidemiology of dengue and dengue hemorrhagic fever. In: Gubler D.J., and Kuno G. (Eds). Dengue and Dengue Hemorrhagic Fever (1997), CAB International, New York 23-44
-
(1997)
Dengue and Dengue Hemorrhagic Fever
, pp. 23-44
-
-
Halstead, S.B.1
-
17
-
-
0033557480
-
Use of a fluorescence plate reader for measuring kinetic parameters with inner filter effect correction
-
Liu Y., Kati W., Chen C.M., Tripathi R., Molla A., and Kohlbrenner W. Use of a fluorescence plate reader for measuring kinetic parameters with inner filter effect correction. Anal. Biochem. 267 (1999) 331-335
-
(1999)
Anal. Biochem.
, vol.267
, pp. 331-335
-
-
Liu, Y.1
Kati, W.2
Chen, C.M.3
Tripathi, R.4
Molla, A.5
Kohlbrenner, W.6
-
18
-
-
0015327378
-
A linear equation that describes the steady-state kinetics of enzymes and subcellular particles interacting with tightly bound inhibitors
-
Henderson P.J.F. A linear equation that describes the steady-state kinetics of enzymes and subcellular particles interacting with tightly bound inhibitors. Biochem. J. 127 (1973) 321-333
-
(1973)
Biochem. J.
, vol.127
, pp. 321-333
-
-
Henderson, P.J.F.1
-
19
-
-
0034096441
-
Chimeric dengue type 2 (vaccine strain PDK-53)/dengue type 1 virus as a potential candidate dengue type 1 virus vaccine
-
Huang C.Y., Butrapet S., Pierro D.J., Chang G.J., Hunt A.R., Bhamarapravati N., Gubler D.J., and Kinney R.M. Chimeric dengue type 2 (vaccine strain PDK-53)/dengue type 1 virus as a potential candidate dengue type 1 virus vaccine. J. Virol. 74 (2000) 3020-3028
-
(2000)
J. Virol.
, vol.74
, pp. 3020-3028
-
-
Huang, C.Y.1
Butrapet, S.2
Pierro, D.J.3
Chang, G.J.4
Hunt, A.R.5
Bhamarapravati, N.6
Gubler, D.J.7
Kinney, R.M.8
-
20
-
-
0014770810
-
Observations related to the pathogenesis of dengue hemorrhagic fever. II. Antigenic and biologic properties of dengue viruses and their association with disease response in the host
-
Halstead S.B., and Simasthien P. Observations related to the pathogenesis of dengue hemorrhagic fever. II. Antigenic and biologic properties of dengue viruses and their association with disease response in the host. Yale J. Biol. Med. 42 (1970) 276-292
-
(1970)
Yale J. Biol. Med.
, vol.42
, pp. 276-292
-
-
Halstead, S.B.1
Simasthien, P.2
-
21
-
-
0018628281
-
Virological surveillance for dengue hemorrhagic fever in Indonesia using the mosquito inoculation technique, Bull
-
Gubler D.J., Suharyono W., Sumarmo, Wulur H., Jahja E., and Sulianti Saroso J. Virological surveillance for dengue hemorrhagic fever in Indonesia using the mosquito inoculation technique, Bull. World Health Organ. 57 (1979) 931-936
-
(1979)
World Health Organ.
, vol.57
, pp. 931-936
-
-
Gubler, D.J.1
Suharyono, W.2
Sumarmo3
Wulur, H.4
Jahja, E.5
Sulianti Saroso, J.6
-
22
-
-
0036417901
-
Catalytically active Dengue virus NS3 protease forms aggregates that are separable by size exclusion chromatography
-
Arakaki T.L., Fang N.X., Fairlie D.P., Young P.R., and Martin J.L. Catalytically active Dengue virus NS3 protease forms aggregates that are separable by size exclusion chromatography. Protein Expr. Purif. 25 (2004) 241-247
-
(2004)
Protein Expr. Purif.
, vol.25
, pp. 241-247
-
-
Arakaki, T.L.1
Fang, N.X.2
Fairlie, D.P.3
Young, P.R.4
Martin, J.L.5
-
23
-
-
0032768961
-
Membrane permeabilization by small hydrophobic nonstructural proteins of Japanese encephalitis virus
-
Chang Y.S., Liao C.L., Tsao C.H., Chen M.C., Liu C.I., Chen L.K., and Lin Y.L. Membrane permeabilization by small hydrophobic nonstructural proteins of Japanese encephalitis virus. J. Virol. 73 (1999) 6257-6264
-
(1999)
J. Virol.
, vol.73
, pp. 6257-6264
-
-
Chang, Y.S.1
Liao, C.L.2
Tsao, C.H.3
Chen, M.C.4
Liu, C.I.5
Chen, L.K.6
Lin, Y.L.7
-
24
-
-
0035824539
-
Activity of recombinant dengue 2 virus NS3 protease in the presence of a truncated NS2B co-factor, small peptide substrates, and inhibitors
-
Leung D., Schroder K., White H., Fang N.X., Stoermer M.J., Abbenante G., Martin J.L., Young P.R., and Fairlie D.P. Activity of recombinant dengue 2 virus NS3 protease in the presence of a truncated NS2B co-factor, small peptide substrates, and inhibitors. J. Biol. Chem. 276 (2001) 45762-45771
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 45762-45771
-
-
Leung, D.1
Schroder, K.2
White, H.3
Fang, N.X.4
Stoermer, M.J.5
Abbenante, G.6
Martin, J.L.7
Young, P.R.8
Fairlie, D.P.9
-
26
-
-
0029916225
-
Control of aggregation in protein refolding: the temperature-leap tactic
-
Xie Y., and Wetlaufer D.B. Control of aggregation in protein refolding: the temperature-leap tactic. Protein Sci. 5 (1996) 517-523
-
(1996)
Protein Sci.
, vol.5
, pp. 517-523
-
-
Xie, Y.1
Wetlaufer, D.B.2
-
27
-
-
33745662626
-
Functional characterization of the NS2B/NS3 protease complex from seven viruses belonging to different groups inside the genus Flavivirus
-
Bessaud M., Pastorino B.A.M., Peyrefitte C.N., Roland D., Grandadam M., and Tolou H.J. Functional characterization of the NS2B/NS3 protease complex from seven viruses belonging to different groups inside the genus Flavivirus. Virus Res. 120 (2006) 79-90
-
(2006)
Virus Res.
, vol.120
, pp. 79-90
-
-
Bessaud, M.1
Pastorino, B.A.M.2
Peyrefitte, C.N.3
Roland, D.4
Grandadam, M.5
Tolou, H.J.6
-
28
-
-
13244281716
-
Site-directed mutagenesis and kinetic studies of the West Nile Virus NS3 protease identify key enzyme-substrate interactions
-
Chappell K.J., Nall T.A., Stoermer M.J., Fang N.X., Tyndall J.D., Fairlie D.P., and Young P.R. Site-directed mutagenesis and kinetic studies of the West Nile Virus NS3 protease identify key enzyme-substrate interactions. J. Biol. Chem. 280 (2005) 2896-2903
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 2896-2903
-
-
Chappell, K.J.1
Nall, T.A.2
Stoermer, M.J.3
Fang, N.X.4
Tyndall, J.D.5
Fairlie, D.P.6
Young, P.R.7
-
29
-
-
33845976698
-
Insights to substrate binding and processing by West Nile Virus NS3 protease through combined modeling, protease mutagenesis, and kinetic studies
-
Chappell K.J., Stoermer M.J., Fairlie D.P., and Young P.R. Insights to substrate binding and processing by West Nile Virus NS3 protease through combined modeling, protease mutagenesis, and kinetic studies. J. Biol. Chem. 281 (2006) 38448-38458
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 38448-38458
-
-
Chappell, K.J.1
Stoermer, M.J.2
Fairlie, D.P.3
Young, P.R.4
-
30
-
-
34247607600
-
Switching the substrate specificity of the two-component NS2B-NS3 flavivirus proteinase by structure-based mutagenesis
-
Shiryaev S.A., Ratnikov B.I., Aleshin A.E., Kozlow I.A., Nelson N.A., Lebl M., Smith J.W., Liddington R.C., and Strongin A.Y. Switching the substrate specificity of the two-component NS2B-NS3 flavivirus proteinase by structure-based mutagenesis. J. Virol. 81 (2007) 4501-4509
-
(2007)
J. Virol.
, vol.81
, pp. 4501-4509
-
-
Shiryaev, S.A.1
Ratnikov, B.I.2
Aleshin, A.E.3
Kozlow, I.A.4
Nelson, N.A.5
Lebl, M.6
Smith, J.W.7
Liddington, R.C.8
Strongin, A.Y.9
|