-
1
-
-
0035834113
-
Hierarchical self-assembly of chiral rod-like molecules as a model for peptide beta-sheet tapes, ribbons, fibrils, and fibers
-
Aggeli A., Nyrkova I.A., Bell M., Harding R., Carrick L., McLeish T.C., Semenov A.N., and Boden N. Hierarchical self-assembly of chiral rod-like molecules as a model for peptide beta-sheet tapes, ribbons, fibrils, and fibers. Proc. Natl. Acad. Sci. USA 98 (2001) 11857-11862
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 11857-11862
-
-
Aggeli, A.1
Nyrkova, I.A.2
Bell, M.3
Harding, R.4
Carrick, L.5
McLeish, T.C.6
Semenov, A.N.7
Boden, N.8
-
2
-
-
0038219626
-
Domain organization and structure-function relationship of the HET-s prion protein of Podospora anserina
-
Balguerie A., Dos Reis S., Ritter C., Chaignepain S., Coulary-Salin B., Forge V., Bathany K., Lascu I., Schmitter J.M., Riek R., and Saupe S.J. Domain organization and structure-function relationship of the HET-s prion protein of Podospora anserina. EMBO J. 22 (2003) 2071-2081
-
(2003)
EMBO J.
, vol.22
, pp. 2071-2081
-
-
Balguerie, A.1
Dos Reis, S.2
Ritter, C.3
Chaignepain, S.4
Coulary-Salin, B.5
Forge, V.6
Bathany, K.7
Lascu, I.8
Schmitter, J.M.9
Riek, R.10
Saupe, S.J.11
-
3
-
-
33745622856
-
Methods for the in vivo and in vitro analysis of [Het-s] prion infectivity
-
Benkemoun L., Sabate R., Malato L., Dos Reis S., Dalstra H., Saupe S.J., and Maddelein M.L. Methods for the in vivo and in vitro analysis of [Het-s] prion infectivity. Methods 39 (2006) 61-67
-
(2006)
Methods
, vol.39
, pp. 61-67
-
-
Benkemoun, L.1
Sabate, R.2
Malato, L.3
Dos Reis, S.4
Dalstra, H.5
Saupe, S.J.6
Maddelein, M.L.7
-
4
-
-
0344875516
-
Amyloid fibril formation in the context of full-length protein: effects of proline mutations on the amyloid fibril formation of beta2-microglobulin
-
Chiba T., Hagihara Y., Higurashi T., Hasegawa K., Naiki H., and Goto Y. Amyloid fibril formation in the context of full-length protein: effects of proline mutations on the amyloid fibril formation of beta2-microglobulin. J. Biol. Chem. 278 (2003) 47016-47024
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 47016-47024
-
-
Chiba, T.1
Hagihara, Y.2
Higurashi, T.3
Hasegawa, K.4
Naiki, H.5
Goto, Y.6
-
5
-
-
33746377894
-
Protein misfolding, functional amyloid, and human disease
-
Chiti F., and Dobson C.M. Protein misfolding, functional amyloid, and human disease. Annu. Rev. Biochem. 75 (2006) 333-366
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
6
-
-
27944455577
-
Chiral bias of amyloid fibrils revealed by the twisted conformation of Thioflavin T: an induced circular dichroism/DFT study
-
Dzwolak W., and Pecul M. Chiral bias of amyloid fibrils revealed by the twisted conformation of Thioflavin T: an induced circular dichroism/DFT study. FEBS Lett. 579 (2005) 6601-6603
-
(2005)
FEBS Lett.
, vol.579
, pp. 6601-6603
-
-
Dzwolak, W.1
Pecul, M.2
-
7
-
-
0033856165
-
Amyloid fibril formation from full-length and fragments of amylin
-
Goldsbury C., Goldie K., Pellaud J., Seelig J., Frey P., Muller S.A., Kistler J., Cooper G.J., and Aebi U. Amyloid fibril formation from full-length and fragments of amylin. J. Struct. Biol. 130 (2000) 352-362
-
(2000)
J. Struct. Biol.
, vol.130
, pp. 352-362
-
-
Goldsbury, C.1
Goldie, K.2
Pellaud, J.3
Seelig, J.4
Frey, P.5
Muller, S.A.6
Kistler, J.7
Cooper, G.J.8
Aebi, U.9
-
8
-
-
0031170857
-
Polymorphic fibrillar assembly of human amylin
-
Goldsbury C.S., Cooper G.J., Goldie K.N., Muller S.A., Saafi E.L., Gruijters W.T., Misur M.P., Engel A., Aebi U., and Kistler J. Polymorphic fibrillar assembly of human amylin. J. Struct. Biol. 119 (1997) 17-27
-
(1997)
J. Struct. Biol.
, vol.119
, pp. 17-27
-
-
Goldsbury, C.S.1
Cooper, G.J.2
Goldie, K.N.3
Muller, S.A.4
Saafi, E.L.5
Gruijters, W.T.6
Misur, M.P.7
Engel, A.8
Aebi, U.9
Kistler, J.10
-
9
-
-
34248670403
-
Study on the binding of Thioflavin T to beta-sheet-rich and non-beta-sheet cavities
-
Groenning M., Olsen L., van de Weert M., Flink J.M., Frokjaer S., and Jorgensen F.S. Study on the binding of Thioflavin T to beta-sheet-rich and non-beta-sheet cavities. J. Struct. Biol. 158 (2007) 358-369
-
(2007)
J. Struct. Biol.
, vol.158
, pp. 358-369
-
-
Groenning, M.1
Olsen, L.2
van de Weert, M.3
Flink, J.M.4
Frokjaer, S.5
Jorgensen, F.S.6
-
10
-
-
34548380970
-
Binding mode of Thioflavin T in insulin amyloid fibrils
-
Groenning M., Norrman M., Flink J.M., van de Weert M., Bukrinsky J.T., Schluckebier G., and Frokjaer S. Binding mode of Thioflavin T in insulin amyloid fibrils. J. Struct. Biol. 159 (2007) 483-497
-
(2007)
J. Struct. Biol.
, vol.159
, pp. 483-497
-
-
Groenning, M.1
Norrman, M.2
Flink, J.M.3
van de Weert, M.4
Bukrinsky, J.T.5
Schluckebier, G.6
Frokjaer, S.7
-
11
-
-
0033798946
-
Histidine residues underlie Congo red binding to A beta analogs
-
Inouye H., Nguyen J.T., Fraser P.E., Shinchuk L.M., Packard A.B., and Kirschner D.A. Histidine residues underlie Congo red binding to A beta analogs. Amyloid 7 (2000) 179-188
-
(2000)
Amyloid
, vol.7
, pp. 179-188
-
-
Inouye, H.1
Nguyen, J.T.2
Fraser, P.E.3
Shinchuk, L.M.4
Packard, A.B.5
Kirschner, D.A.6
-
12
-
-
0037047118
-
The protofilament structure of insulin amyloid fibrils
-
Jimenez J.L., Nettleton E.J., Bouchard M., Robinson C.V., Dobson C.M., and Saibil H.R. The protofilament structure of insulin amyloid fibrils. Proc. Natl. Acad. Sci. USA 99 (2002) 9196-9201
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9196-9201
-
-
Jimenez, J.L.1
Nettleton, E.J.2
Bouchard, M.3
Robinson, C.V.4
Dobson, C.M.5
Saibil, H.R.6
-
14
-
-
25144489633
-
Mechanism of thioflavin T binding to amyloid fibrils
-
Khurana R., Coleman C., Ionescu-Zanetti C., Carter S.A., Krishna V., Grover R.K., Roy R., and Singh S. Mechanism of thioflavin T binding to amyloid fibrils. J. Struct. Biol. 151 (2005) 229-238
-
(2005)
J. Struct. Biol.
, vol.151
, pp. 229-238
-
-
Khurana, R.1
Coleman, C.2
Ionescu-Zanetti, C.3
Carter, S.A.4
Krishna, V.5
Grover, R.K.6
Roy, R.7
Singh, S.8
-
15
-
-
0041343061
-
A general model for amyloid fibril assembly based on morphological studies using atomic force microscopy
-
Khurana R., Ionescu-Zanetti C., Pope M., Li J., Nielson L., Ramirez-Alvarado M., Regan L., Fink A.L., and Carter S.A. A general model for amyloid fibril assembly based on morphological studies using atomic force microscopy. Biophys. J. 85 (2003) 1135-1144
-
(2003)
Biophys. J.
, vol.85
, pp. 1135-1144
-
-
Khurana, R.1
Ionescu-Zanetti, C.2
Pope, M.3
Li, J.4
Nielson, L.5
Ramirez-Alvarado, M.6
Regan, L.7
Fink, A.L.8
Carter, S.A.9
-
16
-
-
33750072302
-
Conformation of amyloid fibrils of beta2-microglobulin probed by tryptophan mutagenesis
-
Kihara M., Chatani E., Iwata K., Yamamoto K., Matsuura T., Nakagawa A., Naiki H., and Goto Y. Conformation of amyloid fibrils of beta2-microglobulin probed by tryptophan mutagenesis. J. Biol. Chem. 281 (2006) 31061-31069
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 31061-31069
-
-
Kihara, M.1
Chatani, E.2
Iwata, K.3
Yamamoto, K.4
Matsuura, T.5
Nakagawa, A.6
Naiki, H.7
Goto, Y.8
-
17
-
-
0024352110
-
Quantitative evaluation of congo red binding to amyloid-like proteins with a beta-pleated sheet conformation
-
Klunk W.E., Pettegrew J.W., and Abraham D.J. Quantitative evaluation of congo red binding to amyloid-like proteins with a beta-pleated sheet conformation. J. Histochem. Cytochem. 37 (1989) 1273-1281
-
(1989)
J. Histochem. Cytochem.
, vol.37
, pp. 1273-1281
-
-
Klunk, W.E.1
Pettegrew, J.W.2
Abraham, D.J.3
-
18
-
-
0032899322
-
Quantifying amyloid beta-peptide (Abeta) aggregation using the Congo red-Abeta (CR-abeta) spectrophotometric assay
-
Klunk W.E., Jacob R.F., and Mason R.P. Quantifying amyloid beta-peptide (Abeta) aggregation using the Congo red-Abeta (CR-abeta) spectrophotometric assay. Anal. Biochem. 266 (1999) 66-76
-
(1999)
Anal. Biochem.
, vol.266
, pp. 66-76
-
-
Klunk, W.E.1
Jacob, R.F.2
Mason, R.P.3
-
19
-
-
11144222595
-
The binding of thioflavin-T to amyloid fibrils: localisation and implications
-
Krebs M.R., Bromley E.H., and Donald A.M. The binding of thioflavin-T to amyloid fibrils: localisation and implications. J. Struct. Biol. 149 (2005) 30-37
-
(2005)
J. Struct. Biol.
, vol.149
, pp. 30-37
-
-
Krebs, M.R.1
Bromley, E.H.2
Donald, A.M.3
-
20
-
-
3442889359
-
Synthetic mammalian prions
-
Legname G., Baskakov I.V., Nguyen H.O., Riesner D., Cohen F.E., DeArmond S.J., and Prusiner S.B. Synthetic mammalian prions. Science 305 (2004) 673-676
-
(2004)
Science
, vol.305
, pp. 673-676
-
-
Legname, G.1
Baskakov, I.V.2
Nguyen, H.O.3
Riesner, D.4
Cohen, F.E.5
DeArmond, S.J.6
Prusiner, S.B.7
-
21
-
-
0027502784
-
Thioflavine T interaction with synthetic Alzheimer's disease beta-amyloid peptides: detection of amyloid aggregation in solution
-
LeVine III H. Thioflavine T interaction with synthetic Alzheimer's disease beta-amyloid peptides: detection of amyloid aggregation in solution. Protein Sci. 2 (1993) 404-410
-
(1993)
Protein Sci.
, vol.2
, pp. 404-410
-
-
LeVine III, H.1
-
22
-
-
0032849874
-
Quantification of beta-sheet amyloid fibril structures with thioflavin T
-
LeVine III H. Quantification of beta-sheet amyloid fibril structures with thioflavin T. Methods Enzymol. 309 (1999) 274-284
-
(1999)
Methods Enzymol.
, vol.309
, pp. 274-284
-
-
LeVine III, H.1
-
23
-
-
14844303913
-
Evidence for the presence of three distinct binding sites for the thioflavin T class of Alzheimer's disease PET imaging agents on beta-amyloid peptide fibrils
-
Lockhart A., Ye L., Judd D.B., Merritt A.T., Lowe P.N., Morgenstern J.L., Hong G., Gee A.D., and Brown J. Evidence for the presence of three distinct binding sites for the thioflavin T class of Alzheimer's disease PET imaging agents on beta-amyloid peptide fibrils. J. Biol. Chem. 280 (2005) 7677-7684
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 7677-7684
-
-
Lockhart, A.1
Ye, L.2
Judd, D.B.3
Merritt, A.T.4
Lowe, P.N.5
Morgenstern, J.L.6
Hong, G.7
Gee, A.D.8
Brown, J.9
-
25
-
-
0032855484
-
Kinetic analysis of amyloid fibril formation
-
Naiki H., and Gejyo F. Kinetic analysis of amyloid fibril formation. Methods Enzymol. 309 (1999) 305-318
-
(1999)
Methods Enzymol.
, vol.309
, pp. 305-318
-
-
Naiki, H.1
Gejyo, F.2
-
26
-
-
3343003514
-
Techniques to study amyloid fibril formation in vitro
-
Nilsson M.R. Techniques to study amyloid fibril formation in vitro. Methods 34 (2004) 151-160
-
(2004)
Methods
, vol.34
, pp. 151-160
-
-
Nilsson, M.R.1
-
27
-
-
0000111757
-
Fibril stability in solutions of twisted β-sheet peptides: a new kind of micellization in chiral systems
-
Nyrkova I.A., Semenov A.N., Aggeli A., and Boden N. Fibril stability in solutions of twisted β-sheet peptides: a new kind of micellization in chiral systems. Eur. Phys. J. B 17 (2000) 481-497
-
(2000)
Eur. Phys. J. B
, vol.17
, pp. 481-497
-
-
Nyrkova, I.A.1
Semenov, A.N.2
Aggeli, A.3
Boden, N.4
-
28
-
-
28944433479
-
The changing face of glucagon fibrillation: structural polymorphism and conformational imprinting
-
Pedersen J.S., Dikov D., Flink J.L., Hjuler H.A., Christiansen G., and Otzen D.E. The changing face of glucagon fibrillation: structural polymorphism and conformational imprinting. J. Mol. Biol. 355 (2006) 501-523
-
(2006)
J. Mol. Biol.
, vol.355
, pp. 501-523
-
-
Pedersen, J.S.1
Dikov, D.2
Flink, J.L.3
Hjuler, H.A.4
Christiansen, G.5
Otzen, D.E.6
-
29
-
-
0032482868
-
A comparative study of the determination of the critical micelle concentration by conductivity and dielectric constant measurements
-
Pérez-Rodríguez M., Prieto G., Rega C., Varela L.M., Sarmiento F., and Mosquera V. A comparative study of the determination of the critical micelle concentration by conductivity and dielectric constant measurements. Langmuir 14 (1998) 4422-4426
-
(1998)
Langmuir
, vol.14
, pp. 4422-4426
-
-
Pérez-Rodríguez, M.1
Prieto, G.2
Rega, C.3
Varela, L.M.4
Sarmiento, F.5
Mosquera, V.6
-
30
-
-
0035790045
-
Emission of thioflavin T and its off-on control in polymer membranes
-
Raj C.R., and Ramaraj R. Emission of thioflavin T and its off-on control in polymer membranes. Photochem. Photobiol. 74 (2001) 752-759
-
(2001)
Photochem. Photobiol.
, vol.74
, pp. 752-759
-
-
Raj, C.R.1
Ramaraj, R.2
-
31
-
-
20444458341
-
Correlation of structural elements and infectivity of the HET-s prion
-
Ritter C., Maddelein M.L., Siemer A.B., Luhrs T., Ernst M., Meier B.H., Saupe S.J., and Riek R. Correlation of structural elements and infectivity of the HET-s prion. Nature 435 (2005) 844-848
-
(2005)
Nature
, vol.435
, pp. 844-848
-
-
Ritter, C.1
Maddelein, M.L.2
Siemer, A.B.3
Luhrs, T.4
Ernst, M.5
Meier, B.H.6
Saupe, S.J.7
Riek, R.8
-
32
-
-
0035835033
-
Interaction of alpha-amylase with n-alkylammonium bromides
-
Sabate R., and Estelrich J. Interaction of alpha-amylase with n-alkylammonium bromides. Int. J. Biol. Macromol. 28 (2001) 151-156
-
(2001)
Int. J. Biol. Macromol.
, vol.28
, pp. 151-156
-
-
Sabate, R.1
Estelrich, J.2
-
33
-
-
34250890734
-
Thioflavin T fluorescence anisotropy: an alternative technique for the study of amyloid aggregation
-
Sabate R., and Saupe S.J. Thioflavin T fluorescence anisotropy: an alternative technique for the study of amyloid aggregation. Biochem. Biophys. Res. Commun. 360 (2007) 135-138
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.360
, pp. 135-138
-
-
Sabate, R.1
Saupe, S.J.2
-
34
-
-
34249951500
-
Prion and non-prion amyloids of the HET-s prion forming domain
-
Sabate R., Baxa U., Benkemoun L., Sanchez de Groot N., Coulary-Salin B., Maddelein M.L., Malato L., Ventura S., Steven A.C., and Saupe S.J. Prion and non-prion amyloids of the HET-s prion forming domain. J. Mol. Biol. 370 (2007) 768-783
-
(2007)
J. Mol. Biol.
, vol.370
, pp. 768-783
-
-
Sabate, R.1
Baxa, U.2
Benkemoun, L.3
Sanchez de Groot, N.4
Coulary-Salin, B.5
Maddelein, M.L.6
Malato, L.7
Ventura, S.8
Steven, A.C.9
Saupe, S.J.10
-
35
-
-
34249290108
-
Atomic structures of amyloid cross-beta spines reveal varied steric zippers
-
Sawaya M.R., Sambashivan S., Nelson R., Ivanova M.I., Sievers S.A., Apostol M.I., Thompson M.J., Balbirnie M., Wiltzius J.J., McFarlane H.T., Madsen A.O., Riekel C., and Eisenberg D. Atomic structures of amyloid cross-beta spines reveal varied steric zippers. Nature 447 (2007) 453-457
-
(2007)
Nature
, vol.447
, pp. 453-457
-
-
Sawaya, M.R.1
Sambashivan, S.2
Nelson, R.3
Ivanova, M.I.4
Sievers, S.A.5
Apostol, M.I.6
Thompson, M.J.7
Balbirnie, M.8
Wiltzius, J.J.9
McFarlane, H.T.10
Madsen, A.O.11
Riekel, C.12
Eisenberg, D.13
-
36
-
-
0344490335
-
Conducting nanowires built by controlled self-assembly of amyloid fibers and selective metal deposition
-
Scheibel T., Parthasarathy R., Sawicki G., Lin X.M., Jaeger H., and Lindquist S.L. Conducting nanowires built by controlled self-assembly of amyloid fibers and selective metal deposition. Proc. Natl. Acad. Sci. USA 100 (2003) 4527-4532
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 4527-4532
-
-
Scheibel, T.1
Parthasarathy, R.2
Sawicki, G.3
Lin, X.M.4
Jaeger, H.5
Lindquist, S.L.6
-
37
-
-
34247093347
-
Mass analysis by scanning transmission electron microscopy and electron diffraction validate predictions of stacked beta-solenoid model of HET-s prion fibrils
-
Sen A., Baxa U., Simon M.N., Wall J.S., Sabate R., Saupe S.J., and Steven A.C. Mass analysis by scanning transmission electron microscopy and electron diffraction validate predictions of stacked beta-solenoid model of HET-s prion fibrils. J. Biol. Chem. 282 (2007) 5545-5550
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 5545-5550
-
-
Sen, A.1
Baxa, U.2
Simon, M.N.3
Wall, J.S.4
Sabate, R.5
Saupe, S.J.6
Steven, A.C.7
-
38
-
-
33750480868
-
Characterization of the nanoscale properties of individual amyloid fibrils
-
Smith J.F., Knowles T.P., Dobson C.M., Macphee C.E., and Welland M.E. Characterization of the nanoscale properties of individual amyloid fibrils. Proc. Natl. Acad. Sci. USA 103 (2006) 15806-15811
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 15806-15811
-
-
Smith, J.F.1
Knowles, T.P.2
Dobson, C.M.3
Macphee, C.E.4
Welland, M.E.5
-
39
-
-
34250698331
-
Computational study of thioflavin T torsional relaxation in the excited state
-
Stsiapura V.I., Maskevich A.A., Kuzmitsky V.A., Turoverov K.K., and Kuznetsova I.M. Computational study of thioflavin T torsional relaxation in the excited state. J. Phys. Chem. A 111 (2007) 4829-4835
-
(2007)
J. Phys. Chem. A
, vol.111
, pp. 4829-4835
-
-
Stsiapura, V.I.1
Maskevich, A.A.2
Kuzmitsky, V.A.3
Turoverov, K.K.4
Kuznetsova, I.M.5
-
40
-
-
17444404577
-
5-Dodecanoylaminofluorescein as a probe for the determination of critical micelle concentration of detergents using fluorescence anisotropy
-
Thorsteinsson M.V., Richter J., Lee A.L., and DePhillips P. 5-Dodecanoylaminofluorescein as a probe for the determination of critical micelle concentration of detergents using fluorescence anisotropy. Anal. Biochem. 340 (2005) 220-225
-
(2005)
Anal. Biochem.
, vol.340
, pp. 220-225
-
-
Thorsteinsson, M.V.1
Richter, J.2
Lee, A.L.3
DePhillips, P.4
-
41
-
-
2942620539
-
Propagating prions in fungi and mammals
-
Tuite M.F., and Koloteva-Levin N. Propagating prions in fungi and mammals. Mol. Cell 14 (2004) 541-552
-
(2004)
Mol. Cell
, vol.14
, pp. 541-552
-
-
Tuite, M.F.1
Koloteva-Levin, N.2
-
42
-
-
33750017513
-
Molecular structure of amyloid fibrils: insights from solid-state NMR
-
Tycko R. Molecular structure of amyloid fibrils: insights from solid-state NMR. Q. Rev. Biophys. 39 (2006) 1-55
-
(2006)
Q. Rev. Biophys.
, vol.39
, pp. 1-55
-
-
Tycko, R.1
-
43
-
-
33846781516
-
Dual binding modes of Congo red to amyloid protofibril surface observed in molecular dynamics simulations
-
Wu C., Wang Z., Lei H., Zhang W., and Duan Y. Dual binding modes of Congo red to amyloid protofibril surface observed in molecular dynamics simulations. J. Am. Chem. Soc. 129 (2007) 1225-1232
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 1225-1232
-
-
Wu, C.1
Wang, Z.2
Lei, H.3
Zhang, W.4
Duan, Y.5
|