Molecular detection and genetic diversity of norovirus in hospitalized young adults with acute gastroenteritis in Bahia, Brazil

Archives of Virology

Volumn 153, Issue 6, 2008, Pages 1125-1129

  Campos, Gubio Soares ^a   Moreau, Vitor Hugo ^b   Bandeira, Antonio ^c   Barberino, Goreth ^c   Almeida, Paulo Fernando ^a   Amador, David Moraga ^d   De Lima, Margareth Oliveira ^a   Sardi, Silvia Ines ^a  

^a FEDERAL UNIVERSITY OF BAHIA   (Brazil)

^b Faculdade de Tecnologia e Ciências   (Brazil)

^c Hospital Alianca   (Brazil)

^d UNIVERSITY OF FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACUTE DISEASE; ADULT; ARTICLE; BRAZIL; EPIDEMIC; EPIDEMIOLOGY; GASTROENTERITIS; GENETIC VARIABILITY; GENETICS; HUMAN; NOROVIRUS; PHYLOGENY; VIRUS INFECTION;

ACUTE DISEASE; ADULT; BRAZIL; CALICIVIRIDAE INFECTIONS; DISEASE OUTBREAKS; EPIDEMIOLOGY, MOLECULAR; GASTROENTERITIS; HUMANS; NOROVIRUS; PHYLOGENY; VARIATION (GENETICS);

NOROVIRUS;

EID: 44449086776     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-008-0078-x     Document Type: Article

References (29)

1. Amber-Balay K, Bon F, Le Guyader F, Pothier P, Kohli E (2005) Characterization of new recombinant noroviruses. J Clin Microbiol 43:5179-5186
2. Blanton LH, Adams SM, Beard RS, Wei G, Bulens SN, Widdowson MA, Glass RI, Monroe SS (2006) Molecular and epidemiologic trends of caliciviruses associated with outbreaks of acute gastroenteritis in the United States, 2000-2004. J Infect Dis 193:413-421
3. Bull RA, Tanaka MM, White PA (2007) Norovirus recombination. J Gen Virol 88:3347-3359
4. Campos GS, Sardi SI, Sampaio AS, Mello VBB (2002) Detection of human rotavirus in children with diarrhea episodes in Salvador, Bahia, Brazil. J Med Biol 1:7-11
5. Castilho JG, Munford V, Resque HR, Fagundes-Neto U, Vinje J, Racz ML (2006) Genetic diversity of norovirus among children with gastroenteritis in Sao Paulo State, Brazil. J Clin Microbiol 44:3947-3953
6. Chapin AR, Carpenter CM, Dudley WC, Gibson LC, Pratdesaba R, Torres O, Sanchez D, Belkind-Gerson J, Nyquist I, Karnell A, Gustafsson B, Halpern JL, Bourgeois AL, Schwab KJ (2005) Prevalence of norovirus among visitors from the United States to Mexico and Guatemala who experience traveler's diarrhea. J Clin Microbiol 43:1112-1117
7. Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD (2003) Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res 31:3497-3500
8. Fankhauser RL, Noel JS, Monroe SS, Ando T, Glass RI, Nascimento JP, Leite JPG (1998) Molecular epidemiology of "norwalk-like viruses" in outbreaks of gastroenteritis in the United States. J Infect Dis 178:1571-1578
9. Felsenstein J (1989) PHYLIP - phylogeny inference package (Version 3.2). Cladistics 5:164-166
10. Gallimore CI, Barreiros MAB, Brown DWG, Nascimento JP, Leite JPG (2004) Noroviruses associated with acute gastroenteritis in a children's day care facility in Rio de Janeiro, Brasil. Braz. J Med Biol 37:321-326
11. Green KY (2007) Caliciviridae: the noroviruses. In: Knipe DM, Howley PM (eds) Fields virology. 5th edn. Lippincott Williams & Wilkins, Philadelphia
12. Guerrant RL, Hughes JM, Lima NL, Crane J (1990) Diarrhea in developed and developing countries: magnitude, special settings, and etiologies. Rev Infect Dis 12:41-50
13. Hale A, Mattick K, Lewis D, Estes M, Jiang X, Green J, Eglin R, Brown D (2000) Distinct epidemiological patterns of norwalk-like virus infection. J Med Virol 62:99-103
14. Hutson AM, Atmar RL, Estes MK (2004) Norovirus disease: changing epidemiology and host susceptibility factors. Trends Microbiol l12:279-287
15. Ike AC, Brockmann SO, Hartelt K, Marschang RE, Contzen M, Oehme RM (2006) Molecular epidemiology of norovirus in outbreaks of gastroenteritis in Southwest Germany from 2001 to 2004. J Clin Microbiol 44:1262-1267
16. Koek AG, Bovée LPMJ, van den Hoek JAR, Bos AJ, Bruisten SM (2006) Additional value of typing noroviruses in gastroenteritis outbreaks in Amsterdam, The Netherlands. J Clin Virol 35:167-172
17. Lamhoujeb S, Charest H, Fliss I, Ngazoa S, Jean J (2007) Phylogenetic analysis of norovirus isolates involved in some Canadian gastroenteritis outbreaks in 2004 and 2005. Can J Microbiol 53:1133-1140
18. Lopman B, Vennema H, Kohli E, Pothier P, Sanchez A, Negredo A, Buesa J, Schreier E, Reacher M, Brown D, Gray J, Iturriza M, Gallimore C, Bottiger B, Hedlund KO, Torvén M, von Bonsdorff CH, Maunula L, Poljsak-Prijatelj M, Zimsek J, Reuter G, Szücs G, Melegh B, Svennson L, van Duijnhoven Y, Koopmans M (2004) Increase in viral gastroenteritis outbreaks in Europe and epidemic spread of new norovírus variant. Lancet 363:682-688
19. Mattner F, Sohr D, Heim A, Gastmeier P, Gastmeier P, Vennema H, Koopmans M (2006) Risk groups for clinical complications of norovírus infections: an outbreak investigation. Clin Microbiol Infect Dis 12:69-74
20. Parashar UD, Bresee JS, Glass RI (2003) The global burden of diarrhea disease in children. Bull World Health Organ 81:236
21. Parks CG, Moe CL, Rhodes D, Lima A, Barrett L, Tseng F, Baric R, Talal A, Guerrant R (1999) Genomic diversity of "norwalk like viruses" (NLVs): pediatric infections in a Brazilian shantytown. J Med Virol 58:426-434
22. Phan TG, Kuroiwa T, Kaneshi K, Ueda Y, Nakaya S, Nishimura S, Yamamoto A, Sugita K, Nishimura T, Yagyu F, Okitsu S, Müller WEG, Maneekarn N, Ushijima H (2006) Changing distribution of norovirus genotypes and genetic analysis of recombinant GIIb among infants and children with diarrhea in Japan. J Med Virol 78:971-978
23. Santos N, Volotão EM, Soares CC, Campos GS, Sardi SI, Hoshino Y (2005) Predominance of rotavirus genotype G9 during the 1999, 2000 and 2002 seasons among hospitalized children in the city of Salvador, Bahia, Brazil: implications for future vaccine strategies. J Clin Microbiol 43:4064-4069
24. Schreier E, Döring F, Künkel U (2000) Molecular epidemiology of outbreaks of gastroenteritis associated with small round structured viruses in Germany in 1997/98. Arch Virol 145:443-453
25. Thackray LB, Wobus CE, Chachu KA, Bo Liu, Alegre ER, Henderson KS, Kelley ST, Virgin HW (2007) Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence. J Virol 81:10460-10473
26. Victoria M, Carvalho-Costa FA, Heinamann MB, Leite JP, Miagostovich M (2007) Prevalence and molecular epidemiology of noroviruses in hospitalized children with acute gastroenteritis in Rio de Janeiro, Brazil, 2004. Pediatr Infect Dis 26:602-606
27. Vidal R, Roessler P, Solari V, Vollaire J, Xi Jiang, Matson DO, Mamani N, Prado V, O'Ryan ML (2006) Novel recombinant norovirus causing outbreaks of gastroenteritis in Santiago, Chile. J Clin Microbiol 44:2271-2275
28. Vinjé J, Koopmans MP (1996) Molecular detection and epidemiology of small round-structured viruses in outbreaks of gastroenteritis in the Netherlands. J Infect Dis 174:610-615
29. Waters A, Coughlan S, Hall WW (2007) Characterization of a novel recombination event in the norovirus polymerase gene. Virology 363:11-14