Genomic diversity of 'norwalk like viruses' (NLVs): Pediatric infections in a Brazilian Shantytown

Journal of Medical Virology

Volumn 58, Issue 4, 1999, Pages 426-434

  Parks, Christine G ^a   Moe, Christine L ^a   Rhodes, Deanne ^a   Lima, Aldo ^c   Barrett, Leah ^b   Tseng, Fanchen ^a   Baric, Ralph ^a   Talal, Andrew ^a   Guerrant, Richard ^b  

^a IL   (United States)

^b UNIVERSITY OF VIRGINIA   (United States)

^c FEDERAL UNIVERSITY OF CEARÁ   (Brazil)

Author keywords

Diarrhea; Gastroenteritis; Human calicivirus; Small round structured virus

Indexed keywords

ARTICLE; BRAZIL; CHILD; CHILD HOSPITALIZATION; CHILDHOOD DISEASE; CONTROLLED STUDY; GENE SEQUENCE; HUMAN; INFANT; MAJOR CLINICAL STUDY; NONHUMAN; NORWALK GASTROENTERITIS VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; URBAN AREA; VIRUS GENE; VIRUS INFECTION;

NARCISSUS LATENT VIRUS; NOROVIRUS; NOROVIRUS ISOLATES; NORWALK VIRUS; SMALL ROUND STRUCTURED VIRUS;

EID: 0032809152     PISSN: 01466615     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1096-9071(199908)58:4<426::AID-JMV17>3.0.CO;2-K     Document Type: Article

References (42)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403-410.
2. Ando T, Monroe SS, Gentsch JR, Jin Q, Lewis DC, Glass RI. 1995. Detection and differentiation of antigenically distinct small round-structured viruses (Norwalk-like viruses) by reverse transcription-PCR and Southern hybridization. J Clin Microbiol 33:64-71.
3. Ando T, Mulders MN, Lewis DC, Estes MK, Monroe SS, Glass RI. 1994. Comparison of the polymerase region of small round structured virus strains previously classified in three antigenic types by solid-phase immune electron microscopy. Arch Virol 135:217-226.
4. Cauchi MR, Doultree JC, Marshall JA, Wright PJ. 1996. Molecular characterization of Camberwell virus and sequence variation in ORF3 of small round-structured (Norwalk-like) viruses. J Med Virol 49:70-76.
5. Dimitrov DH, Dashti SA, Ball JM, Bishbishi E, Alsaeid K, Jiang X, Estes MK. 1997. Prevalence of antibodies to human caliciviruses (HuCVs) in Kuwait established by ELISA using baculovirus-expressed capsid antigens representing two genogroups of HuCVs. J Med Virol 51:115-118.
6. Dingle KE, Lambden PR, Caul EO, Clarke IN. 1995. Human enteric Caliciviridae: the complete genome sequence and expression of virus-like particles from a genetic group II small round structured virus. J Gen Virol 76:2349-2355.
7. Fang GD, Lima AA, Martins CV, Nataro JP, Guerrant RL. 1995. Etiology and epidemiology of persistent diarrhea in northeastern Brazil: a hospital-based, prospective, case-control study. J Pediatr Gastroenterol Nutr 21:137-144.
8. Gray JJ, Jiang X, Morgan-Capner P, Desselberger U, Estes MK. 1993. Prevalence of antibodies to Norwalk virus in England: detection by enzyme-linked immunosorbent assay using baculovirus-expressed Norwalk virus capsid antigen. J Clin Microbiol 31:1022-1025.
9. Green KY, Ando T, Balayan MS, Estes MK, Maston DO, Nakata S, Neil JD, Studdert MJ, Thiel HJ. 1999. Taxonomy of the caliciviruses. International Workshop on Human Caliciviruses. Centers For Disease Control, Atlanta, GA, USA. March 29-31.
10. Green SM, Dingle KE, Lambden PR, Caul EO, Ashley CR, Clarke IN. 1994. Human enteric Caliciviridae: a new prevalent small round-structured virus group defined by RNA-dependent RNA polymerase and capsid diversity. J Gen Virol 75:1883-1888.
11. Guerrant RL. 1994. Twelve messages from enteric infections for science and society. Am J Trop Med Hyg 51:26-35.
12. Jiang X, Matson DO, Velazquez FR, Calva JJ, Zhong WM, Hu J, Ruiz-Palacios GM, Pickering LK. 1995. Study of Norwalk-related viruses in Mexican children. J Med Virol 47:309-316.
13. Jiang X, Wang J, Grahm DY, Estes MK. 1992. Detection of Norwalk virus in stool by polymerase chain reaction. J Clin Microbiol 30: 2529-2534.
14. Johnson PC, Mathewson JJ, DuPont HL, Greenberg HB. 1990. Multiple-challenge study of host susceptibility to Norwalk gastroenteritis in US adults. J Infect Dis 161:18-21.
15. Kapikian AZ, Estes MK, Chanock RM. 1996. Norwalk group of viruses. In: Fields BN, Knipe DM, Howley PM, editors. Fields virology, 3rd ed. Philadelphia: Lippincott-Raven Publishers. p 783-810.
16. Kew OM, Nottay BK, Rico-Hesse R, Pallansch MA. 1990. Molecular epidemiology of wild poliovirus transmission. In: Kurstak E, Marusyk RG, Murphy FA, Van Regenmortel MHV, editors. Applied virology research, vol. 2, virus variability, Epidemiology and control. New York: Plenum Medical Book Co., p 199-221.
17. Koopmans MP, Goosen ES, Lima AA, McAuliffe IT, Nataro JP, Barrett LJ, Glass RI, Guerrant RL. 1997. Association of torovirus with acute and persistent diarrhea in children. Pediatr Infect Dis J 16:504-507.
18. Lambden PR, Caul EO, Ashley CR, Clarke IN. 1993. Sequence and genome organization of a human small round-structured (Norwalk-like) virus. Science 259:516-519.
19. Lew JF, Kapikian AZ, Valdesuso J, Green KY. 1994a. Molecular characterization of Hawaii virus and other Norwalk-like viruses: evidence for genetic polymorphism among human caliciviruses. J Infect Dis 170:535-542.
20. Lew JF, Petric M, Kapikian AZ, Jiang X, Estes MK, Green KY. 1994b. Identification of Minireovirus as a Norwalk-like virus in pediatric patients with gastroenteritis. J Virol 68:3391-3396.
21. Lima AAM, Guerrant RL. 1992. Persistent diarrhea in children: epidemiology, risk factors, pathophysiology, nutritional impact, and management. Epidemiol Rev 14:222-241.
22. Maguire AJ, Green J, Brown DWG, Desselberger U, Gray JJ. 1998. Molecular epidemiology of gastroenteritis caused by small round structured viruses (SRSV) in East Anglia, UK. Proceedings of the 17th Annual Meeting of the American Society for Virology, Vancouver, BC. Abstract 15-10, p. 182.
23. Moe CL, Gentsch J, Ando T, Grohmann G, Monroe SS, Jiang X, Wang J, Estes MK, Seto Y, Humphrey C, Stine S, Glass RI. 1994. Application of PCR to detect Norwalk virus in fecal specimens from outbreaks of gastroenteritis. J Clin Microbiol 32:642-648.
24. Moe C, Rhodes D, Pusek S, Tseng F, Heizer W, Kapoor C, Gilliam B, Harb M, Stewart P, Miller S, Sobsey M, Hermann J, Blacklow N, Calderon R. 1998. Determination of Norwalk virus dose-response in human volunteers. Proceedings of the 98th General Meeting of the American Society for Microbiology, Atlanta, GA. Abstract C-384.
25. Monroe SS, Stine SE, Jiang X, Estes MK, Glass RI. 1993. Detection of antibody to recombinant Norwalk virus antigen in specimens from outbreaks of gastroenteritis. J Clin Microbiol 31:2866-2872.
26. Noel JS, Ando T, Leite JP, Green KY, Dingle KE, Estes MK, Seto Y, Monroe SS, Glass RI. 1997. Correlation of patient immune response with genetically characterize small round-structured viruses involved in outbreaks of nonbacterial acute gastroenteritis in the United States, 1990 to 1995. J Med Virol 53:372-383.
27. Noel JS, Frankhauser RL, Ando T, Monroe SS, Glass RI. 1998. The dynamics of small round structured virus infections: probably emergence of a global strain. Proceedings of the 17th Annual Meeting of the American Society for Virology, Vancouver, BC. Abstract P15-9, p. 182.
28. Norcott JP, Green J, Lewis D, Estes MK, Barlow KL, Brown DWG. 1994. Genomic diversity of small round structural viruses in the United Kingdom. J Med Virol 44:280-286.
29. Paje-Villar E, Co BG, Caradang EH, Raymundo A, Lagamayo E, Lavadia E, Rigor E, Hart CA. 1994. Non-bacterial diarrhea in children in the Philippines. Ann Trop Med Parasitol 88:53-58.
30. Parker SP, Cubitt WD, Jiang X. 1995. Enzyme immunoassay using baculovirus-expressed human calicivirus (Mexico) for the measurement of IgG responses and determining its seroprevalence in London, UK. J Med Virol 46:194-200.
31. Parrino TA, Schreiber DS, Trief JS, Kapikian AZ, Blacklow NR. 1977. Clinical immunity in acute gastroenteritis caused by Norwalk agent. N Engl J Med 297:86-89.
32. Pringle CR. 1998. Virus taxonomy - San Diego 1998. Arch Virol 143: 1449-1459.
33. Schorling JB, Wanke CA, Schorling SK, McAuliffe JF, deSouza MA, Guerrant RL. 1990. A prospective study of persistent diarrhea among children in an urban Brazilian slum. Am J Epidemiol 132: 144-156.
34. Singh BP, Sreenivasan MA, Pavri KM. 1989. Viruses in acute gastroenteritis in children in Pune, India. Epidemiol Infect 102:345-353.
35. Smit TK, Steele AD, Peenze I, Jiang XI, Estes MK. 1997. Study of Norwalk virus and Mexico virus infections at Ga-Rankuwa, South Africa. J Clin Microbiol 35:2381-2385.
36. Swofford DL. 1991. PAUP: Phylogenetic analysis using parsimony, version 3.s. Champaign, IL: Illinois Natural History Survey.
37. Timenetsky M, Kisielius JJ, Grisi SJ, Escobar AM, Ueda M, Tanaka H. 1993. Rotavirus, adenovirus, astrovirus, calicivirus, and small round virus particles in feces of children with and without acute diarrhea, from 1987 to 1988, in the greater Sao Paulo. Revista do Instituto de Medicina Tropical de Sao Paulo 35:275-280.
38. Wang J, Jiang X, Madore HP, Gray J, Desselberger U, Ando T, Seto Y, Oishi I, Lew JF, Green KY, Estes MK. 1994. Sequence diversity of small, round-structured viruses in the Norwalk virus group. J Virol 68:5982-5990.
39. Wolfaardt M, Taylor MB, Booysen HF, Engelbrecht L, Grabow WOK, Jiang X. 1997. Incidence of human calicivirus and rotavirus infection in patients with gastroenteritis in South Africa. J Med Virol 51:290-296.
40. Wolfaardt M, Taylor MB, Grabow WO, Cubitt WD, Jiang X. 1995. Molecular characterization of small round structured viruses associated with gastroenteritis in South Africa. J Med Virol 47:386-391.
41. Wright PJ, Gunesekere IC, Doultree JC, Marshall JA. 1998. Small round-structured (Norwalk-like) viruses and classical human caliciviruses in Southeastern Australia, 1980-1996. J Med Virol 55: 312-320.
42. Wyatt RG, Dolin R, Blacklow NR, DuPont HL, Buscho RF, Thornhill TS, Kapikan AZ, Channock RM. 1974. Comparison of three agents of acute infectious non-bacterial gastroenteritis by cross-challenge in volunteers. J Infect Dis 129:709-714.