메뉴 건너뛰기




Volumn 74, Issue 10, 2008, Pages 3182-3188

Engineering and analysis of a Saccharomyces cerevisiae strain that uses formaldehyde as an auxiliary substrate

Author keywords

[No Author keywords available]

Indexed keywords

BIOMASS; CELL CULTURE; FORMALDEHYDE; GENE ENCODING; GLUCOSE; VITAMINS;

EID: 44249087638     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02858-07     Document Type: Article
Times cited : (13)

References (49)
  • 1
    • 0030814766 scopus 로고    scopus 로고
    • AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily
    • Alarco, A. M., I. Balan, D. Talibi, N. Mainville, and M. Raymond. 1997. AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily. J. Biol. Chem. 272:19304-19313.
    • (1997) J. Biol. Chem , vol.272 , pp. 19304-19313
    • Alarco, A.M.1    Balan, I.2    Talibi, D.3    Mainville, N.4    Raymond, M.5
  • 2
    • 0021024592 scopus 로고
    • Improvement of growth yield of yeast on glucose to the maximum by using an additional energy source
    • Babel, W., R. H. Müller, and K. D. Markuske. 1983. Improvement of growth yield of yeast on glucose to the maximum by using an additional energy source. Arch. Microbiol. 136:203-208.
    • (1983) Arch. Microbiol , vol.136 , pp. 203-208
    • Babel, W.1    Müller, R.H.2    Markuske, K.D.3
  • 3
    • 0036146645 scopus 로고    scopus 로고
    • Molecular characterization of the Hansenula polymorpha FLD1 gene encoding formaldehyde dehydrogenase
    • Baerends, R. J. S., G. J. Sulter, T. W. Jeffries, J. M. Cregg, and M. Veenhuis. 2002. Molecular characterization of the Hansenula polymorpha FLD1 gene encoding formaldehyde dehydrogenase. Yeast 19:37-42.
    • (2002) Yeast , vol.19 , pp. 37-42
    • Baerends, R.J.S.1    Sulter, G.J.2    Jeffries, T.W.3    Cregg, J.M.4    Veenhuis, M.5
  • 5
    • 0037474301 scopus 로고    scopus 로고
    • Boer, V. M., J. H. De Winde, J. T. Pronk, and M. D. Piper. 2003. The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J. Biol. Chem. 278:3265-3274.
    • Boer, V. M., J. H. De Winde, J. T. Pronk, and M. D. Piper. 2003. The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J. Biol. Chem. 278:3265-3274.
  • 6
    • 84954928914 scopus 로고
    • The effect of certain reagents on the activity of biotin
    • Bosworth Brown, G., and V. du Vigneaud. 1941. The effect of certain reagents on the activity of biotin. J. Biol. Chem. 141:85-89.
    • (1941) J. Biol. Chem , vol.141 , pp. 85-89
    • Bosworth Brown, G.1    du Vigneaud, V.2
  • 7
    • 0021822522 scopus 로고
    • Utilization of formate as an additional energy source by glucose-limited chemostat cultures of Candida utilis CBS 621 and Saccharomyces cerevisiae CBS 8066: Evidence for the absence of transhydrogenase activity in yeasts
    • Bruinenberg, P. M., R. Jonker, J. P. van Dijken, and W. A. Scheffers. 1985. Utilization of formate as an additional energy source by glucose-limited chemostat cultures of Candida utilis CBS 621 and Saccharomyces cerevisiae CBS 8066: evidence for the absence of transhydrogenase activity in yeasts. Arch. Microbiol. 142:302-306.
    • (1985) Arch. Microbiol , vol.142 , pp. 302-306
    • Bruinenberg, P.M.1    Jonker, R.2    van Dijken, J.P.3    Scheffers, W.A.4
  • 8
    • 0018287453 scopus 로고
    • Genetic effects of formaldehyde in yeast. III. Nuclear and cytoplasmic mutagenic effects
    • Chanet, R., and R. C. von Borstel. 1979. Genetic effects of formaldehyde in yeast. III. Nuclear and cytoplasmic mutagenic effects. Mutat. Res. 62:239-253.
    • (1979) Mutat. Res , vol.62 , pp. 239-253
    • Chanet, R.1    von Borstel, R.C.2
  • 9
    • 0037332579 scopus 로고    scopus 로고
    • Co-gasification of biomass and coal for methanol synthesis
    • Chmielniak, T., and M. Sciazko. 2003. Co-gasification of biomass and coal for methanol synthesis. Appl. Energy 74:393-403.
    • (2003) Appl. Energy , vol.74 , pp. 393-403
    • Chmielniak, T.1    Sciazko, M.2
  • 11
    • 0032809574 scopus 로고    scopus 로고
    • Purification and properties of an esterase from the yeast Saccharomyces cerevisiae and identification of the encoding gene
    • Degrassi, G., L. Uotila, R. Klima, and V. Venturi. 1999. Purification and properties of an esterase from the yeast Saccharomyces cerevisiae and identification of the encoding gene. Appl. Environ. Microbiol. 65:3470-3472.
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 3470-3472
    • Degrassi, G.1    Uotila, L.2    Klima, R.3    Venturi, V.4
  • 12
    • 0023427968 scopus 로고
    • Import of alcohol oxidase into peroxisomes of Saccharomyces cerevisiae
    • Distel, B., M. Veenhuis, and H. F. Tabak. 1987. Import of alcohol oxidase into peroxisomes of Saccharomyces cerevisiae. EMBO J. 6:3111-3116.
    • (1987) EMBO J , vol.6 , pp. 3111-3116
    • Distel, B.1    Veenhuis, M.2    Tabak, H.F.3
  • 13
    • 25844432253 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae adaptation to weak acids involves the transcription factor Haa1p and Haa1p-regulated genes
    • Fernandes, A. R., N. P. Mira, R. C. Vargas, I. Canelhas, and Sá-Correia. 2005. Saccharomyces cerevisiae adaptation to weak acids involves the transcription factor Haa1p and Haa1p-regulated genes. Biochem. Biophys. Res. Commun. 337:95-103.
    • (2005) Biochem. Biophys. Res. Commun , vol.337 , pp. 95-103
    • Fernandes, A.R.1    Mira, N.P.2    Vargas, R.C.3    Canelhas, I.4    Correia, S.5
  • 14
    • 33749490202 scopus 로고    scopus 로고
    • Physiological and genetic engineering of cytosolic redox metabolism in Saccharomyces cerevisiae for improved glycerol production
    • Geertman, J. M. A., A. J. van Maris, J. P. van Dijken, and J. T. Pronk. 2006. Physiological and genetic engineering of cytosolic redox metabolism in Saccharomyces cerevisiae for improved glycerol production. Metab. Eng. 8:532-542.
    • (2006) Metab. Eng , vol.8 , pp. 532-542
    • Geertman, J.M.A.1    van Maris, A.J.2    van Dijken, J.P.3    Pronk, J.T.4
  • 15
    • 33751279921 scopus 로고    scopus 로고
    • Engineering NADH metabolism in Saccharomyces cerevisiae: Formate as an electron donor for glycerol production by anaerobic, glucose-limited chemostat cultures
    • Geertman, J. M. A., J. P. van Dijken, and J. T. Pronk. 2006. Engineering NADH metabolism in Saccharomyces cerevisiae: formate as an electron donor for glycerol production by anaerobic, glucose-limited chemostat cultures. FEMS Yeast Res. 6:1193-1203.
    • (2006) FEMS Yeast Res , vol.6 , pp. 1193-1203
    • Geertman, J.M.A.1    van Dijken, J.P.2    Pronk, J.T.3
  • 16
    • 0024440560 scopus 로고
    • Molecular characterization of the two genes SNQ and SFA that confer hyperresistance to 4-nitroquinoline-N-oxide and formaldehyde in Saccharomyces cerevisiae
    • Gömpel-Klein, P., M. Mack, and M. Brendel. 1989. Molecular characterization of the two genes SNQ and SFA that confer hyperresistance to 4-nitroquinoline-N-oxide and formaldehyde in Saccharomyces cerevisiae. Curr. Genet. 16:65-74.
    • (1989) Curr. Genet , vol.16 , pp. 65-74
    • Gömpel-Klein, P.1    Mack, M.2    Brendel, M.3
  • 17
    • 0037130599 scopus 로고    scopus 로고
    • Future prospects for production of methanol and hydrogen from biomass
    • Hamelinck, C. N., and A. P. C. Faaij. 2002. Future prospects for production of methanol and hydrogen from biomass. J. Power Sources 111:1-22.
    • (2002) J. Power Sources , vol.111 , pp. 1-22
    • Hamelinck, C.N.1    Faaij, A.P.C.2
  • 18
    • 0033676098 scopus 로고    scopus 로고
    • DNA cloning using in vitro site-specific recombination
    • Hartley, J. L., G. F. Temple, and M. A. Brasch. 2000. DNA cloning using in vitro site-specific recombination. Genome Res. 10:1788-1795.
    • (2000) Genome Res , vol.10 , pp. 1788-1795
    • Hartley, J.L.1    Temple, G.F.2    Brasch, M.A.3
  • 19
    • 44349109788 scopus 로고    scopus 로고
    • Hollenberg, C. P, and Z. A. Janowicz. 1990. DNA molecules coding for FMDH control regions and structured gene for protein having FMDH activity and their uses. European patent EP0299108 AU2443488
    • Hollenberg, C. P., and Z. A. Janowicz. 1990. DNA molecules coding for FMDH control regions and structured gene for protein having FMDH activity and their uses. European patent EP0299108 (AU2443488).
  • 20
    • 0033856370 scopus 로고    scopus 로고
    • Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1
    • Jungwirth, H., F. Wendler, B. Platzer, H. Bergler, and Högenauer. 2000. Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1. Eur. J. Biochem. 267:4809-4816.
    • (2000) Eur. J. Biochem , vol.267 , pp. 4809-4816
    • Jungwirth, H.1    Wendler, F.2    Platzer, B.3    Bergler, H.4    Högenauer5
  • 22
    • 0032775010 scopus 로고    scopus 로고
    • Epitope tagging of yeast genes using a PCR-based strategy: More tags and improved practical routines
    • Knop, M., K. Siegers, G. Pereira, W. Zachariae, B. Winsor, K. Nasmyth, and F. Schiebel. 1999. Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines. Yeast 15:963-972.
    • (1999) Yeast , vol.15 , pp. 963-972
    • Knop, M.1    Siegers, K.2    Pereira, G.3    Zachariae, W.4    Winsor, B.5    Nasmyth, K.6    Schiebel, F.7
  • 24
    • 0003100147 scopus 로고
    • Spezifische Farbreaktion zum direkten Nachweis der Ameisensäure.
    • Lang, E., and H. Lang. 1972. Spezifische Farbreaktion zum direkten Nachweis der Ameisensäure. Fresenius Zeitschrift fur Analytische Chemie 260: 8-10.
    • (1972) Fresenius Zeitschrift fur Analytische Chemie , vol.260 , pp. 8-10
    • Lang, E.1    Lang, H.2
  • 26
    • 0034892680 scopus 로고    scopus 로고
    • Mechanism of oxidation of inorganic sulfur compounds by thiosulfate-grown Thiobacillus thiooxidans
    • Masau, R. J., J. K. Oh, and I. Suzuki. 2001. Mechanism of oxidation of inorganic sulfur compounds by thiosulfate-grown Thiobacillus thiooxidans. Can. J. Microbiol. 47:348-358.
    • (2001) Can. J. Microbiol , vol.47 , pp. 348-358
    • Masau, R.J.1    Oh, J.K.2    Suzuki, I.3
  • 27
    • 44349089988 scopus 로고    scopus 로고
    • Morais, J. O. F., and M. H. D. Maia. 1959. Estudos de microorganismos encocentrados em leitos de despéjos de caldas de destilarias de Pernambuco. II. Uma nova espécie de Hansenula, H. polymorpha. Anais de Escola Superior de Quimica, Universidade do Recife 1:15-20.
    • Morais, J. O. F., and M. H. D. Maia. 1959. Estudos de microorganismos encocentrados em leitos de despéjos de caldas de destilarias de Pernambuco. II. Uma nova espécie de Hansenula, H. polymorpha. Anais de Escola Superior de Quimica, Universidade do Recife 1:15-20.
  • 28
    • 0028953840 scopus 로고
    • Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
    • Mumberg, D., R. Müller, and M. Funk. 1995. Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156:119-122.
    • (1995) Gene , vol.156 , pp. 119-122
    • Mumberg, D.1    Müller, R.2    Funk, M.3
  • 29
    • 44349179402 scopus 로고    scopus 로고
    • Metabolic engineering of Saccharomyces cerevisiae microbial cell factories for succinic acid
    • Otero, J. M., L. Olsson, and J. Nielsen. 2007. Metabolic engineering of Saccharomyces cerevisiae microbial cell factories for succinic acid. J. Biotechnol. 131(Suppl.):S205.
    • (2007) J. Biotechnol , vol.131 , Issue.SUPPL.
    • Otero, J.M.1    Olsson, L.2    Nielsen, J.3
  • 31
    • 29344442844 scopus 로고    scopus 로고
    • Hansenula polymorpha and Saccharomyces cerevisiae Pex5p's recognize different, independent peroxisomal targeting signals in alcohol oxidase
    • Ozimek, P., P. Kötter, M. Veenhuis, and I. J. van der Klei. 2006. Hansenula polymorpha and Saccharomyces cerevisiae Pex5p's recognize different, independent peroxisomal targeting signals in alcohol oxidase. FEBS Lett. 580: 46-50.
    • (2006) FEBS Lett , vol.580 , pp. 46-50
    • Ozimek, P.1    Kötter, P.2    Veenhuis, M.3    van der Klei, I.J.4
  • 32
    • 0037020260 scopus 로고    scopus 로고
    • Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae
    • Piper, M. D., P. Daran-Lapujade, C. Bro, B. Regenberg, S. Knudsen, J. Nielsen, and J. T. Pronk. 2002. Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae. J. Biol. Chem. 277:37001-37008.
    • (2002) J. Biol. Chem , vol.277 , pp. 37001-37008
    • Piper, M.D.1    Daran-Lapujade, P.2    Bro, C.3    Regenberg, B.4    Knudsen, S.5    Nielsen, J.6    Pronk, J.T.7
  • 33
    • 33745005730 scopus 로고    scopus 로고
    • Biotin sensing in Saccharomyces cerevisiae is mediated by a conserved DNA element and requires the activity of biotin-protein ligase
    • Pirner, H. M., and J. Stolz. 2006. Biotin sensing in Saccharomyces cerevisiae is mediated by a conserved DNA element and requires the activity of biotin-protein ligase. J. Biol. Chem. 281:12381-12389.
    • (2006) J. Biol. Chem , vol.281 , pp. 12381-12389
    • Pirner, H.M.1    Stolz, J.2
  • 35
    • 0003066537 scopus 로고
    • Metabolism of methanol by yeasts
    • Sahm, H. 1977. Metabolism of methanol by yeasts. Adv. Biochem. Eng. 6:77-103.
    • (1977) Adv. Biochem. Eng , vol.6 , pp. 77-103
    • Sahm, H.1
  • 38
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski, R. S., and P. Hieter. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Gene 122:19-27.
    • (1989) Gene , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 40
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher, V. G., R. Tibshirani, and G. Chu. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98:5116-5121.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 41
    • 0030996792 scopus 로고    scopus 로고
    • Expression cassettes for formaldehyde and fluoroacetate resistance, two dominant markers in Saccharomyces cerevisiae
    • van den Berg, M. A., and H. Y. Steensma. 1997. Expression cassettes for formaldehyde and fluoroacetate resistance, two dominant markers in Saccharomyces cerevisiae. Yeast 13:551-559.
    • (1997) Yeast , vol.13 , pp. 551-559
    • van den Berg, M.A.1    Steensma, H.Y.2
  • 42
    • 33845329876 scopus 로고    scopus 로고
    • The significance of peroxisomes in methanol metabolism in methylotrophic yeast
    • van der Klei, I. J., H. Yurimoto, Y. Sakai, and M. Veenhuis. 2006. The significance of peroxisomes in methanol metabolism in methylotrophic yeast. Biochim. Biophys. Acta 1763:1453-1462.
    • (2006) Biochim. Biophys. Acta , vol.1763 , pp. 1453-1462
    • van der Klei, I.J.1    Yurimoto, H.2    Sakai, Y.3    Veenhuis, M.4
  • 43
    • 0024969428 scopus 로고
    • Heterologous expression of alcohol oxidase in Saccharomyces cerevisiae: Properties of the enzyme and implications for microbody development
    • van der Klei, I. J., M. Veenhuis, I. van der Ley, and W. Harder. 1989. Heterologous expression of alcohol oxidase in Saccharomyces cerevisiae: properties of the enzyme and implications for microbody development. FEMS Microbiol. Lett. 48:133-137.
    • (1989) FEMS Microbiol. Lett , vol.48 , pp. 133-137
    • van der Klei, I.J.1    Veenhuis, M.2    van der Ley, I.3    Harder, W.4
  • 45
    • 0017146518 scopus 로고
    • S-formylglutathione: The substrate for formate dehydrogenase in methanol-utilizing yeasts
    • van Dijken, J. P., G. J. Oostra-Demkes, R. Otto, and W. Harder. 1976. S-formylglutathione: the substrate for formate dehydrogenase in methanol-utilizing yeasts. Arch. Microbiol. 111:77-83.
    • (1976) Arch. Microbiol , vol.111 , pp. 77-83
    • van Dijken, J.P.1    Oostra-Demkes, G.J.2    Otto, R.3    Harder, W.4
  • 46
    • 0020998853 scopus 로고
    • The significance of peroxisomes in the metabolism of one-carbon compounds in yeasts
    • Veenhuis, M., J. P. van Dijken, and W. Harder. 1983. The significance of peroxisomes in the metabolism of one-carbon compounds in yeasts. Adv. Microbiol. Physiol. 24:1-82.
    • (1983) Adv. Microbiol. Physiol , vol.24 , pp. 1-82
    • Veenhuis, M.1    van Dijken, J.P.2    Harder, W.3
  • 47
    • 0026710123 scopus 로고
    • Effect of benzoic acid on metabolic fluxes in yeasts: A continuous culture study on the regulation of respiration and alcoholic fermentation
    • Verduyn, C., E. Postma, W. A. Scheffers, and J. P. van Dijken. 1992. Effect of benzoic acid on metabolic fluxes in yeasts: a continuous culture study on the regulation of respiration and alcoholic fermentation. Yeast 8:501-517.
    • (1992) Yeast , vol.8 , pp. 501-517
    • Verduyn, C.1    Postma, E.2    Scheffers, W.A.3    van Dijken, J.P.4
  • 49
    • 0027463082 scopus 로고
    • Molecular structure and genetic regulation of SFA, a gene responsible for resistance to formaldehyde in Saccharomyces cerevisiae, and characterization of its protein product
    • Wehner, E. P., E. Rao, and M. Brendel. 1993. Molecular structure and genetic regulation of SFA, a gene responsible for resistance to formaldehyde in Saccharomyces cerevisiae, and characterization of its protein product. Mol. Gen. Genet. 237:351-358.
    • (1993) Mol. Gen. Genet , vol.237 , pp. 351-358
    • Wehner, E.P.1    Rao, E.2    Brendel, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.