-
1
-
-
0028577744
-
Complete chemical structure of photoactive yellow protein: Novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry
-
Baca, M., G. E. Borgstahl, M. Boissinot, P. M. Burke, D. R. Williams, K. A. Slater, and E. D. Getzoff. 1994. Complete chemical structure of photoactive yellow protein: novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry. Biochemistry. 33:14369-14377.
-
(1994)
Biochemistry
, vol.33
, pp. 14369-14377
-
-
Baca, M.1
Borgstahl, G.E.2
Boissinot, M.3
Burke, P.M.4
Williams, D.R.5
Slater, K.A.6
Getzoff, E.D.7
-
2
-
-
0027940414
-
Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry
-
Hoff, W. D., P. Düx, K. Hård, B. Devreese, I. M. Nugteren-Roodzant, W. Crielaard, R. Boelens, R. Kaptein, J. van Beeumen, and K. J. Hellingwerf. 1994. Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry. Biochemistry. 33:13959-13962.
-
(1994)
Biochemistry
, vol.33
, pp. 13959-13962
-
-
Hoff, W.D.1
Düx, P.2
Hård, K.3
Devreese, B.4
Nugteren-Roodzant, I.M.5
Crielaard, W.6
Boelens, R.7
Kaptein, R.8
van Beeumen, J.9
Hellingwerf, K.J.10
-
3
-
-
0028868422
-
Reconsti-tution photoactive yellow protein from apoprotein and p-coumaric acid derivatives
-
Imamoto, Y., T. Ito, M. Kataoka, and F. Tokunaga. 1995. Reconsti-tution photoactive yellow protein from apoprotein and p-coumaric acid derivatives. FEBS Lett. 374:157-160.
-
(1995)
FEBS Lett
, vol.374
, pp. 157-160
-
-
Imamoto, Y.1
Ito, T.2
Kataoka, M.3
Tokunaga, F.4
-
4
-
-
0029110488
-
1.4 Å structure of photoactive yellow protein, a cytosolic photoreceptor: Unusual fold, active site, and chromophore
-
Borgstahl, G. E., D. R. Williams, and E. D. Getzoff. 1995. 1.4 Å structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry. 34:6278-6287.
-
(1995)
Biochemistry
, vol.34
, pp. 6278-6287
-
-
Borgstahl, G.E.1
Williams, D.R.2
Getzoff, E.D.3
-
5
-
-
0043125483
-
Anticipatory active-site motions and chromophore distortion prime photoreceptor PYP for light activation
-
Getzoff, E. D., K. N. Gutwin, and U. K. Genick. 2003. Anticipatory active-site motions and chromophore distortion prime photoreceptor PYP for light activation. Nat. Struct. Biol. 10:663-668.
-
(2003)
Nat. Struct. Biol
, vol.10
, pp. 663-668
-
-
Getzoff, E.D.1
Gutwin, K.N.2
Genick, U.K.3
-
6
-
-
0022430790
-
Isolation and characterization of soluble cyto-chromes, ferredoxins and other chromophoric proteins from the halo-philic phototrophic bacterium Ectothiorhodospira halophila
-
Meyer, T. E. 1985. Isolation and characterization of soluble cyto-chromes, ferredoxins and other chromophoric proteins from the halo-philic phototrophic bacterium Ectothiorhodospira halophila. Biochim. Biophys. Acta. 806:175-183.
-
(1985)
Biochim. Biophys. Acta
, vol.806
, pp. 175-183
-
-
Meyer, T.E.1
-
7
-
-
0037657894
-
Photoactive yellow protein: A prototypic PAS domain sensory protein and development of a common signaling mechanism
-
Cusanovich, M. A., and T. E. Meyer. 2003. Photoactive yellow protein: a prototypic PAS domain sensory protein and development of a common signaling mechanism. Biochemistry. 42:4759-4770.
-
(2003)
Biochemistry
, vol.42
, pp. 4759-4770
-
-
Cusanovich, M.A.1
Meyer, T.E.2
-
8
-
-
0030035662
-
The xanthopsins: A new family of eubacterial blue-light photoreceptors
-
Kort, R., W. D. Hoff, M. Van West, A. R. Kroon, S. M. Hoffer, K. H. Vlieg, W. Crielaand, J. J. Van Beeumen, and K. J. Hellingwerf. 1996. The xanthopsins: a new family of eubacterial blue-light photoreceptors. EMBO J. 15:3209-3218.
-
(1996)
EMBO J
, vol.15
, pp. 3209-3218
-
-
Kort, R.1
Hoff, W.D.2
Van West, M.3
Kroon, A.R.4
Hoffer, S.M.5
Vlieg, K.H.6
Crielaand, W.7
Van Beeumen, J.J.8
Hellingwerf, K.J.9
-
9
-
-
0029892214
-
Sequence evidence for strong conservation of the photoactive yellow proteins from the halophilic phototrophic bacteria Chromatium salexigens and Rhodo-spirillum salexigens
-
Koh, M., G. Van Driessche, B. Samyn, W. D. Hoff, T. E. Meyer, M. A. Cusanovich, and J. J. Van Beeumen. 1996. Sequence evidence for strong conservation of the photoactive yellow proteins from the halophilic phototrophic bacteria Chromatium salexigens and Rhodo-spirillum salexigens. Biochemistry. 35:2526-2534.
-
(1996)
Biochemistry
, vol.35
, pp. 2526-2534
-
-
Koh, M.1
Van Driessche, G.2
Samyn, B.3
Hoff, W.D.4
Meyer, T.E.5
Cusanovich, M.A.6
Van Beeumen, J.J.7
-
10
-
-
0031835808
-
Sequence, chro-mophore extraction and 3-D model of the photoactive yellow protein from Rhodobacter sphaeroides
-
Kort, R., M. K. Phillips-Jones, D. M. van Aalten, A. Haker, S. M. Hoffer, K. J. Hellingwerf, and W. Crielaard. 1998. Sequence, chro-mophore extraction and 3-D model of the photoactive yellow protein from Rhodobacter sphaeroides. Biochim. Biophys. Acta. 1385:1-6.
-
(1998)
Biochim. Biophys. Acta
, vol.1385
, pp. 1-6
-
-
Kort, R.1
Phillips-Jones, M.K.2
van Aalten, D.M.3
Haker, A.4
Hoffer, S.M.5
Hellingwerf, K.J.6
Crielaard, W.7
-
12
-
-
3242747592
-
Photoactive yellow protein, bacteriophytochrome, and sensory rhodopsin in purple phototrophic bacteria
-
Kyndt, J. A., T. E. Meyer, and M. A. Cusanovich. 2004. Photoactive yellow protein, bacteriophytochrome, and sensory rhodopsin in purple phototrophic bacteria. Photochem. Photobiol. Sci. 3:519-530.
-
(2004)
Photochem. Photobiol. Sci
, vol.3
, pp. 519-530
-
-
Kyndt, J.A.1
Meyer, T.E.2
Cusanovich, M.A.3
-
13
-
-
0033575370
-
Bacterial photoreceptor with similarity to photoactive yellow protein and plant phytochromes
-
Jiang, Z., L. R. Swem, B. G. Rushing, S. Devanathan, G. Tollin, and C. E. Bauer. 1999. Bacterial photoreceptor with similarity to photoactive yellow protein and plant phytochromes. Science. 285:406-409.
-
(1999)
Science
, vol.285
, pp. 406-409
-
-
Jiang, Z.1
Swem, L.R.2
Rushing, B.G.3
Devanathan, S.4
Tollin, G.5
Bauer, C.E.6
-
14
-
-
0027271859
-
Primary structure of a photoactive yellow protein from the phototrophic bacterium Ectothiorhodospira halophila, with evidence for the mass and the binding site of the chromophore
-
Van Beeumen, J. J., B. V. Devreese, S. M. Van Bun, W. D. Hoff, K. J. Hellingwerf, T. E. Meyer, D. E. McRee, and M. A. Cusanovich. 1993. Primary structure of a photoactive yellow protein from the phototrophic bacterium Ectothiorhodospira halophila, with evidence for the mass and the binding site of the chromophore. Protein Sci. 2:1114-1125.
-
(1993)
Protein Sci
, vol.2
, pp. 1114-1125
-
-
Van Beeumen, J.J.1
Devreese, B.V.2
Van Bun, S.M.3
Hoff, W.D.4
Hellingwerf, K.J.5
Meyer, T.E.6
McRee, D.E.7
Cusanovich, M.A.8
-
15
-
-
0030914406
-
Functional expression and site-directed mutagenesis of photoactive yellow protein
-
Mihara, K., O. Hisatomi, Y. Imamoto, M. Kataoka, and F. Tokunaga. 1997. Functional expression and site-directed mutagenesis of photoactive yellow protein. J. Biochem. (Tokyo). 121:876-880.
-
(1997)
J. Biochem. (Tokyo)
, vol.121
, pp. 876-880
-
-
Mihara, K.1
Hisatomi, O.2
Imamoto, Y.3
Kataoka, M.4
Tokunaga, F.5
-
16
-
-
0030589514
-
Phi/psi-chology: Ramachandran revisited
-
Kleywegt, G. J., and T. A. Jones. 1996. Phi/psi-chology: Ramachandran revisited. Structure. 4:1395-1400.
-
(1996)
Structure
, vol.4
, pp. 1395-1400
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
17
-
-
0037155256
-
Engineering photocycle dynamics. Crystal structures and kinetics of three photoactive yellow protein hinge-bending mutants
-
van Aalten, D. M., A. Haker, J. Hendriks, K. J. Hellingwerf, L. Joshua-Tor, and W. Crielaard. 2002. Engineering photocycle dynamics. Crystal structures and kinetics of three photoactive yellow protein hinge-bending mutants. J. Biol. Chem. 277:6463-6468.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 6463-6468
-
-
van Aalten, D.M.1
Haker, A.2
Hendriks, J.3
Hellingwerf, K.J.4
Joshua-Tor, L.5
Crielaard, W.6
-
18
-
-
0035901482
-
Roles of amino acid residues near the chromophore of photoactive yellow protein
-
Imamoto, Y., H. Koshimizu, K. Mihara, O. Hisatomi, T. Mizukami, K. Tsujimoto, M. Kataoka, and F. Tokunaga. 2001. Roles of amino acid residues near the chromophore of photoactive yellow protein. Biochemistry. 40:4679-4685.
-
(2001)
Biochemistry
, vol.40
, pp. 4679-4685
-
-
Imamoto, Y.1
Koshimizu, H.2
Mihara, K.3
Hisatomi, O.4
Mizukami, T.5
Tsujimoto, K.6
Kataoka, M.7
Tokunaga, F.8
-
19
-
-
0036836613
-
Role of C-terminal region of Staphylococcal nuclease for foldability, stability, and activity
-
Hirano, S., K. Mihara, Y. Yamazaki, H. Kamikubo, Y. Imamoto, and M. Kataoka. 2002. Role of C-terminal region of Staphylococcal nuclease for foldability, stability, and activity. Proteins Struct. Funct. Genet. 49:255-265.
-
(2002)
Proteins Struct. Funct. Genet
, vol.49
, pp. 255-265
-
-
Hirano, S.1
Mihara, K.2
Yamazaki, Y.3
Kamikubo, H.4
Imamoto, Y.5
Kataoka, M.6
-
20
-
-
0035807935
-
Spectro-scopic characterization of the photocycle intermediates of photoactive yellow protein
-
Imamoto, Y., K. Mihara, F. Tokunaga, and M. Kataoka. 2001. Spectro-scopic characterization of the photocycle intermediates of photoactive yellow protein. Biochemistry. 40:14336-14343.
-
(2001)
Biochemistry
, vol.40
, pp. 14336-14343
-
-
Imamoto, Y.1
Mihara, K.2
Tokunaga, F.3
Kataoka, M.4
-
21
-
-
0031808072
-
New photocycle intermediates in the photoactive yellow protein from Ectothiorhodospira halophila: Picosecond transient absorption spectroscopy
-
Ujj, L., S. Devanathan, T. E. Meyer, M. A. Cusanovich, G. Tollin, and G. H. Atkinson. 1998. New photocycle intermediates in the photoactive yellow protein from Ectothiorhodospira halophila: picosecond transient absorption spectroscopy. Biophys. J. 75:406-412.
-
(1998)
Biophys. J
, vol.75
, pp. 406-412
-
-
Ujj, L.1
Devanathan, S.2
Meyer, T.E.3
Cusanovich, M.A.4
Tollin, G.5
Atkinson, G.H.6
-
22
-
-
0345707600
-
Role of an N-terminal loop in the secondary structural change of photoactive yellow protein
-
Harigai, M., Y. Imamoto, H. Kamikubo, Y. Yamazaki, and M. Kataoka. 2003. Role of an N-terminal loop in the secondary structural change of photoactive yellow protein. Biochemistry. 42:13893-13900.
-
(2003)
Biochemistry
, vol.42
, pp. 13893-13900
-
-
Harigai, M.1
Imamoto, Y.2
Kamikubo, H.3
Yamazaki, Y.4
Kataoka, M.5
-
23
-
-
0035814881
-
Light induces destabilization of photoactive yellow protein
-
Ohishi, S., N. Shimizu, K. Mihara, Y. Imamoto, and M. Kataoka. 2001. Light induces destabilization of photoactive yellow protein. Biochemistry. 40:2854-2859.
-
(2001)
Biochemistry
, vol.40
, pp. 2854-2859
-
-
Ohishi, S.1
Shimizu, N.2
Mihara, K.3
Imamoto, Y.4
Kataoka, M.5
-
24
-
-
34248598352
-
Attempt to simplify the amino-acid sequence of photoactive yellow protein with a set of simple rules
-
Shirai, K., Y. Yamazaki, H. Kamikubo, Y. Imamoto, and M. Kataoka. 2007. Attempt to simplify the amino-acid sequence of photoactive yellow protein with a set of simple rules. Proteins. 67:821-833.
-
(2007)
Proteins
, vol.67
, pp. 821-833
-
-
Shirai, K.1
Yamazaki, Y.2
Kamikubo, H.3
Imamoto, Y.4
Kataoka, M.5
-
25
-
-
0037465835
-
Site-specific mutations provide new insights into the origin of pH effects and alternative spectral forms in the photoactive yellow protein from Halorhodospira halophila
-
Meyer, T. E., S. Devanathan, T. Woo, E. D. Getzoff, G. Tollin, and M. A. Cusanovich. 2003. Site-specific mutations provide new insights into the origin of pH effects and alternative spectral forms in the photoactive yellow protein from Halorhodospira halophila. Biochemistry. 42:3319-3325.
-
(2003)
Biochemistry
, vol.42
, pp. 3319-3325
-
-
Meyer, T.E.1
Devanathan, S.2
Woo, T.3
Getzoff, E.D.4
Tollin, G.5
Cusanovich, M.A.6
-
26
-
-
0030069979
-
Chemical reactivity and spectroscopy of the thiol ester-linked p-coumaric acid chromophore in the photoactive yellow protein from Ectothiorhodo-spira halophila
-
Hoff, W. D., B. Devreese, R. Fokkens, I. M. Nugteren-Roodzant, J. Van Beeumen, N. Nibbering, and K. J. Hellingwerf. 1996. Chemical reactivity and spectroscopy of the thiol ester-linked p-coumaric acid chromophore in the photoactive yellow protein from Ectothiorhodo-spira halophila. Biochemistry. 35:1274-1281.
-
(1996)
Biochemistry
, vol.35
, pp. 1274-1281
-
-
Hoff, W.D.1
Devreese, B.2
Fokkens, R.3
Nugteren-Roodzant, I.M.4
Van Beeumen, J.5
Nibbering, N.6
Hellingwerf, K.J.7
-
27
-
-
7544223280
-
Direct observation of the pH-dependent equilibrium between L-like and M intermediates of photoactive yellow protein
-
Imamoto, Y., M. Harigai, and M. Kataoka. 2004. Direct observation of the pH-dependent equilibrium between L-like and M intermediates of photoactive yellow protein. FEBS Lett. 577:75-80.
-
(2004)
FEBS Lett
, vol.577
, pp. 75-80
-
-
Imamoto, Y.1
Harigai, M.2
Kataoka, M.3
-
28
-
-
0023152468
-
Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin
-
Meyer, T. E., E. Yakali, M. A. Cusanovich, and G. Tollin. 1987. Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin. Biochemistry. 26:418-423.
-
(1987)
Biochemistry
, vol.26
, pp. 418-423
-
-
Meyer, T.E.1
Yakali, E.2
Cusanovich, M.A.3
Tollin, G.4
-
29
-
-
33645224079
-
pH-dependent equilibrium between long lived near-UV intermediates of photoactive yellow protein
-
Shimizu, N., Y. Imamoto, M. Harigai, H. Kamikubo, Y. Yamazaki, and M. Kataoka. 2006. pH-dependent equilibrium between long lived near-UV intermediates of photoactive yellow protein. J. Biol. Chem. 281:4318-4325.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 4318-4325
-
-
Shimizu, N.1
Imamoto, Y.2
Harigai, M.3
Kamikubo, H.4
Yamazaki, Y.5
Kataoka, M.6
-
30
-
-
0032568630
-
Photoactive yellow protein: A structural prototype for the three-dimensional fold of the PAS domain superfamily
-
Pellequer, J. L., K. A. Wager-Smith, S. A. Kay, and E. D. Getzoff. 1998. Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily. Proc. Natl. Acad. Sci. USA. 95:5884-5890.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 5884-5890
-
-
Pellequer, J.L.1
Wager-Smith, K.A.2
Kay, S.A.3
Getzoff, E.D.4
-
31
-
-
0034911722
-
Amino acids in the N-terminal region regulate the photocycle of photoactive yellow protein
-
Harigai, M., S. Yasuda, Y. Imamoto, K. Yoshihara, F. Tokunaga, and M. Kataoka. 2001. Amino acids in the N-terminal region regulate the photocycle of photoactive yellow protein. J. Biochem. (Tokyo). 130:51-56.
-
(2001)
J. Biochem. (Tokyo)
, vol.130
, pp. 51-56
-
-
Harigai, M.1
Yasuda, S.2
Imamoto, Y.3
Yoshihara, K.4
Tokunaga, F.5
Kataoka, M.6
-
32
-
-
0035906913
-
The role of the N-terminal domain of photoactive yellow protein in the transient partial unfolding during signalling state formation
-
van der Horst, M. A., I. H. van Stokkum, W. Crielaard, and K. J. Hellingwerf. 2001. The role of the N-terminal domain of photoactive yellow protein in the transient partial unfolding during signalling state formation. FEBS Lett. 497:26-30.
-
(2001)
FEBS Lett
, vol.497
, pp. 26-30
-
-
van der Horst, M.A.1
van Stokkum, I.H.2
Crielaard, W.3
Hellingwerf, K.J.4
-
33
-
-
0028832513
-
Resonance Raman evidence that the thioester-linked 4-hydroxycin-namyl chromophore of photoactive yellow protein is deprotonated
-
Kim, M., R. A. Mathies, W. D. Hoff, and K. J. Hellingwerf. 1995. Resonance Raman evidence that the thioester-linked 4-hydroxycin-namyl chromophore of photoactive yellow protein is deprotonated. Biochemistry. 34:12669-12672.
-
(1995)
Biochemistry
, vol.34
, pp. 12669-12672
-
-
Kim, M.1
Mathies, R.A.2
Hoff, W.D.3
Hellingwerf, K.J.4
-
34
-
-
0031011485
-
Evidence for proton transfer from Glu-46 to the chromophore during the photocycle of photoactive yellow protein
-
Imamoto, Y., K. Mihara, O. Hisatomi, M. Kataoka, F. Tokunaga, N. Bojkova, and K. Yoshihara. 1997. Evidence for proton transfer from Glu-46 to the chromophore during the photocycle of photoactive yellow protein. J. Biol. Chem. 272:12905-12908.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 12905-12908
-
-
Imamoto, Y.1
Mihara, K.2
Hisatomi, O.3
Kataoka, M.4
Tokunaga, F.5
Bojkova, N.6
Yoshihara, K.7
-
35
-
-
10744225606
-
Resonance Raman spectroscopy reveals the origin of an intermediate wavelength form in photoactive yellow protein
-
El-Mashtoly, S. F., M. Unno, M. Kumauchi, N. Hamada, K. Fujiwara, J. Sasaki, Y. Imamoto, M. Kataoka, F. Tokunaga, and S. Yamauchi. 2004. Resonance Raman spectroscopy reveals the origin of an intermediate wavelength form in photoactive yellow protein. Biochemistry. 43:2279-2287.
-
(2004)
Biochemistry
, vol.43
, pp. 2279-2287
-
-
El-Mashtoly, S.F.1
Unno, M.2
Kumauchi, M.3
Hamada, N.4
Fujiwara, K.5
Sasaki, J.6
Imamoto, Y.7
Kataoka, M.8
Tokunaga, F.9
Yamauchi, S.10
-
36
-
-
0034619501
-
Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein
-
Brudler, R., T. E. Meyer, U. K. Genick, S. Devanathan, T. T. Woo, D. P. Millar, K. Gerwert, M. A. Cusanovich, G. Tollin, and E. D. Getzoff. 2000. Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein. Biochemistry. 39:13478-13486.
-
(2000)
Biochemistry
, vol.39
, pp. 13478-13486
-
-
Brudler, R.1
Meyer, T.E.2
Genick, U.K.3
Devanathan, S.4
Woo, T.T.5
Millar, D.P.6
Gerwert, K.7
Cusanovich, M.A.8
Tollin, G.9
Getzoff, E.D.10
-
39
-
-
0037452676
-
Crystal structure of a photoactive yellow protein from a sensor histidine kinase: Conformational variability and signal transduction
-
Rajagopal, S., and K. Moffat. 2003. Crystal structure of a photoactive yellow protein from a sensor histidine kinase: conformational variability and signal transduction. Proc. Natl. Acad. Sci. USA. 100:1649-1654.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1649-1654
-
-
Rajagopal, S.1
Moffat, K.2
-
40
-
-
0035846381
-
Spectral tuning of photoactive yellow protein. Theoretical and experimental analysis of medium effects on the absorption spectrum of the chromophore
-
Yoda, M., H. Houjou, Y. Inoue, and M. Sakurai. 2001. Spectral tuning of photoactive yellow protein. Theoretical and experimental analysis of medium effects on the absorption spectrum of the chromophore. J. Phys. Chem. B. 105:9887-9895.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 9887-9895
-
-
Yoda, M.1
Houjou, H.2
Inoue, Y.3
Sakurai, M.4
-
41
-
-
0035971221
-
α H··O hydrogen bond of amino acid residues
-
α H··O hydrogen bond of amino acid residues. J. Biol. Chem. 276:9832-9837.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 9832-9837
-
-
Scheiner, S.1
Kar, T.2
Gu, Y.3
-
42
-
-
33845952658
-
Weak hydrogen bonds
-
Chemistry. J. L. Atwood and J. W. Steed, editors. Marcel Dekker, New York
-
Nishio, M. 2004. Weak hydrogen bonds. In Encyclopedia of Supra-molecular Chemistry. J. L. Atwood and J. W. Steed, editors. Marcel Dekker, New York. 1576-1585.
-
(2004)
Encyclopedia of Supra-molecular
, pp. 1576-1585
-
-
Nishio, M.1
-
43
-
-
22144464025
-
A vibrational spectral maker for probing the hydrogen-bonding status of protonated Asp and Glu residues
-
Nie, B., J. Stutzman, and A. Xie. 2005. A vibrational spectral maker for probing the hydrogen-bonding status of protonated Asp and Glu residues. Biophys. J. 88:2833-2847.
-
(2005)
Biophys. J
, vol.88
, pp. 2833-2847
-
-
Nie, B.1
Stutzman, J.2
Xie, A.3
-
45
-
-
0035852878
-
Formation of a new buried charge drives a large-amplitude protein quake in photoreceptor activation
-
Xie, A., L. Kelemen, J. Hendriks, B. J. White, K. J. Hellingwerf, and W. D. Hoff. 2001. Formation of a new buried charge drives a large-amplitude protein quake in photoreceptor activation. Biochemistry. 40:1510-1517.
-
(2001)
Biochemistry
, vol.40
, pp. 1510-1517
-
-
Xie, A.1
Kelemen, L.2
Hendriks, J.3
White, B.J.4
Hellingwerf, K.J.5
Hoff, W.D.6
-
46
-
-
0346850583
-
Lack of negative charge in the E46Q mutant of photoactive yellow protein prevents partial unfolding of the blue-shifted intermediate
-
Derix, N. M., R. W. Wechselberger, M. A. van der Horst, K. J. Hellingwerf, R. Boelens, R. Kaptein, and N. A. van Nuland. 2003. Lack of negative charge in the E46Q mutant of photoactive yellow protein prevents partial unfolding of the blue-shifted intermediate. Biochemistry. 42:14501-14506.
-
(2003)
Biochemistry
, vol.42
, pp. 14501-14506
-
-
Derix, N.M.1
Wechselberger, R.W.2
van der Horst, M.A.3
Hellingwerf, K.J.4
Boelens, R.5
Kaptein, R.6
van Nuland, N.A.7
-
47
-
-
0031808074
-
A helix propensity scale based on experimental studies of peptides and proteins
-
Pace, C. N., and J. M. Scholtz. 1998. A helix propensity scale based on experimental studies of peptides and proteins. Biophys. J. 75:422-427.
-
(1998)
Biophys. J
, vol.75
, pp. 422-427
-
-
Pace, C.N.1
Scholtz, J.M.2
-
48
-
-
0031821274
-
Structural and dynamic changes of photoactive yellow protein during its photocycle in solution
-
Rubinstenn, G., G. W. Vuister, F. A. Mulder, P. E. Dux, R. Boelens, K. J. Hellingwerf, and R. Kaptein. 1998. Structural and dynamic changes of photoactive yellow protein during its photocycle in solution. Nat. Struct. Biol. 5:568-570.
-
(1998)
Nat. Struct. Biol
, vol.5
, pp. 568-570
-
-
Rubinstenn, G.1
Vuister, G.W.2
Mulder, F.A.3
Dux, P.E.4
Boelens, R.5
Hellingwerf, K.J.6
Kaptein, R.7
-
49
-
-
21744460380
-
The solution structure of a transient photoreceptor intermediate: A25 photoactive yellow protein
-
Bernard, C., K. Houben, N. M. Derix, D. Marks, M. A. van der Horst, K. J. Hellingwerf, R. Boelens, R. Kaptein, and N. A. van Nuland. 2005. The solution structure of a transient photoreceptor intermediate: A25 photoactive yellow protein. Structure. 13:953-962.
-
(2005)
Structure
, vol.13
, pp. 953-962
-
-
Bernard, C.1
Houben, K.2
Derix, N.M.3
Marks, D.4
van der Horst, M.A.5
Hellingwerf, K.J.6
Boelens, R.7
Kaptein, R.8
van Nuland, N.A.9
-
51
-
-
0032544202
-
New insights into the photocycle of Ectothiorhodospira halophila photoactive yellow protein: Photorecovery of the long-lived photobleached intermediate in the Met100Ala mutant
-
Devanathan, S., U. K. Genick, I. L. Canestrelli, T. E. Meyer, M. A. Cusanovich, E. D. Getzoff, and G. Tollin. 1998. New insights into the photocycle of Ectothiorhodospira halophila photoactive yellow protein: photorecovery of the long-lived photobleached intermediate in the Met100Ala mutant. Biochemistry. 37:11563-11568.
-
(1998)
Biochemistry
, vol.37
, pp. 11563-11568
-
-
Devanathan, S.1
Genick, U.K.2
Canestrelli, I.L.3
Meyer, T.E.4
Cusanovich, M.A.5
Getzoff, E.D.6
Tollin, G.7
-
52
-
-
0031021311
-
Active site mutants implicate key residues for control of color and light cycle kinetics of photoactive yellow protein
-
Genick, U. K., S. Devanathan, T. E. Meyer, I. L. Canestrelli, E. Williams, M. A. Cusanovich, G. Tollin, and E. D. Getzoff. 1997. Active site mutants implicate key residues for control of color and light cycle kinetics of photoactive yellow protein. Biochemistry. 36:8-14.
-
(1997)
Biochemistry
, vol.36
, pp. 8-14
-
-
Genick, U.K.1
Devanathan, S.2
Meyer, T.E.3
Canestrelli, I.L.4
Williams, E.5
Cusanovich, M.A.6
Tollin, G.7
Getzoff, E.D.8
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