-
1
-
-
0033195230
-
Sequence characterization of a unique intergenic spacer in Gadiformes mitochondrial DNA
-
Bakke IG, Shields F, Johansen S (1999) Sequence characterization of a unique intergenic spacer in Gadiformes mitochondrial DNA. Mar Biotechnol 1:411-415
-
(1999)
Mar Biotechnol
, vol.1
, pp. 411-415
-
-
Bakke, I.G.1
Shields, F.2
Johansen, S.3
-
2
-
-
0002979155
-
A phylogenetic study of the parrotfishes, family Scaridae (Pisces: Labroidei), with a revision of genera
-
Bellwood DR (1994) A phylogenetic study of the parrotfishes, family Scaridae (Pisces: Labroidei), with a revision of genera. Rec Aust Mus Suppl 20:1-86
-
(1994)
Rec Aust Mus Suppl
, vol.20
, pp. 1-86
-
-
Bellwood, D.R.1
-
3
-
-
0002339654
-
A review of the fossil record of the parrotfishes (Labroidei: Scaridae) with a description of a new Calotomus species from the Middle Miocene (Badenian) of Austria
-
Bellwood DR, Schultz O (1991) A review of the fossil record of the parrotfishes (Labroidei: Scaridae) with a description of a new Calotomus species from the Middle Miocene (Badenian) of Austria. Ann Naturhist Mus Wien 92:55-71
-
(1991)
Ann Naturhist Mus Wien
, vol.92
, pp. 55-71
-
-
Bellwood, D.R.1
Schultz, O.2
-
4
-
-
0027282274
-
Abnormal RNA processing associated with a novel tRNA mutation in mitochondrial DNA
-
Bindoff LA, Howell N, Poulton J, McCullough DA, Morten KJ, Lightowlers RN, Turnbull DM, Weber K (1993) Abnormal RNA processing associated with a novel tRNA mutation in mitochondrial DNA. J Biol Chem 268:19559-19564
-
(1993)
J Biol Chem
, vol.268
, pp. 19559-19564
-
-
Bindoff, L.A.1
Howell, N.2
Poulton, J.3
McCullough, D.A.4
Morten, K.J.5
Lightowlers, R.N.6
Turnbull, D.M.7
Weber, K.8
-
5
-
-
0033561361
-
Animal mitochondrial genomes
-
Boore JL (1999) Animal mitochondrial genomes. Nucleic Acids Res 27:1767-1780
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1767-1780
-
-
Boore, J.L.1
-
6
-
-
0001298772
-
The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals
-
Sankoff D, Nadeau J (eds) Kluwer Academic, Dordrecht, Netherlands
-
Boore JL (2000) The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals. In: Sankoff D, Nadeau J (eds) Comparative genomics, Computational biology series, Vol 1. Kluwer Academic, Dordrecht, Netherlands, pp 133-147
-
(2000)
Comparative Genomics, Computational Biology Series
, vol.1
, pp. 133-147
-
-
Boore, J.L.1
-
7
-
-
0023231203
-
Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes
-
Cantatore P, Gadaleta MN, Roberti M, Saccone C, Wilson AC (1987) Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes. Nature 329:853-855
-
(1987)
Nature
, vol.329
, pp. 853-855
-
-
Cantatore, P.1
Gadaleta, M.N.2
Roberti, M.3
Saccone, C.4
Wilson, A.C.5
-
8
-
-
0028334711
-
Complete mitochondrial genome amplification
-
Cheng S, Higuchi R, Stoneking M (1994) Complete mitochondrial genome amplification. Nature Genet 7:350-351
-
(1994)
Nature Genet
, vol.7
, pp. 350-351
-
-
Cheng, S.1
Higuchi, R.2
Stoneking, M.3
-
9
-
-
0027058592
-
Transcription and replication of animal mitochondrial DNA
-
Clayton DA (1992) Transcription and replication of animal mitochondrial DNA. Int Rev Cytol 141:217-232
-
(1992)
Int Rev Cytol
, vol.141
, pp. 217-232
-
-
Clayton, D.A.1
-
10
-
-
0012353175
-
Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences
-
Doda JN, Wright CT, Clayton DA (1981) Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences. Proc Natl Acad Sci USA 78:6116-6120
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 6116-6120
-
-
Doda, J.N.1
Wright, C.T.2
Clayton, D.A.3
-
11
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
13
-
-
0031545349
-
Relationships of fishes of the labrid tribe Hypsigenyini
-
Gomon MF (1997) Relationships of fishes of the labrid tribe Hypsigenyini. Bull Mar Sci 60:789-871
-
(1997)
Bull Mar Sci
, vol.60
, pp. 789-871
-
-
Gomon, M.F.1
-
14
-
-
0002791463
-
A revision of the Odacidae, a temperate Australian-New Zealand labroid fish family
-
Gomon MF, Paxton JR (1985) A revision of the Odacidae, a temperate Australian-New Zealand labroid fish family. IndoPac Fishes 8:1-57
-
(1985)
IndoPac Fishes
, vol.8
, pp. 1-57
-
-
Gomon, M.F.1
Paxton, J.R.2
-
15
-
-
0027225783
-
A compilation of large subunit (23S and 23S-like) ribosome RNA structures: 1993
-
Gutell RR, Gray MW, Schnare MN (1993) A compilation of large subunit (23S and 23S-like) ribosome RNA structures: 1993. Nucleic Acids Res 21:3055-3074
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 3055-3074
-
-
Gutell, R.R.1
Gray, M.W.2
Schnare, M.N.3
-
16
-
-
0000675190
-
Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus
-
Inoue JG, Miya M, Tsukaraoto K, Nishida M (2000) Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus. Fish Sci 66:924-932
-
(2000)
Fish Sci
, vol.66
, pp. 924-932
-
-
Inoue, J.G.1
Miya, M.2
Tsukaraoto, K.3
Nishida, M.4
-
17
-
-
0034904214
-
A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences
-
Inoue JG, Miya M, Tsukamoto K, Nishida M (2001a) A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences. Mol Phylogenet Evol 20:275-285
-
(2001)
Mol Phylogenet Evol
, vol.20
, pp. 275-285
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
18
-
-
0000307861
-
Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus
-
Inoue JG, Miya M, Tsukamoto K, Nishida M (2001b) Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus. Fish Sci 67:828-835
-
(2001)
Fish Sci
, vol.67
, pp. 828-835
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
19
-
-
0242414574
-
Evolution of the deep-sea gulper eel mitochondrial genomes: Large-scale gene rearrangements originated within the eels
-
Inoue JG, Miya M, Tsukamoto K, Nishida M (2003) Evolution of the deep-sea gulper eel mitochondrial genomes: Large-scale gene rearrangements originated within the eels. Mol Biol Evol 20:1917-1924
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1917-1924
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
20
-
-
0000732090
-
Evolution of protein molecules
-
Munro HN (ed) Academic Press, New York
-
Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism. Academic Press, New York, pp 21-132
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
21
-
-
0002236196
-
Fishes of the suborder Labroidei (Pisces: Perciformes): Phylogeny, ecology, and evolutionary significance
-
Kaufman LS, Liem KF (1982) Fishes of the suborder Labroidei (Pisces: Perciformes): Phylogeny, ecology, and evolutionary significance. Breviora 472:1-19
-
(1982)
Breviora
, vol.472
, pp. 1-19
-
-
Kaufman, L.S.1
Liem, K.F.2
-
22
-
-
0035539901
-
Complete mitochondrial DNA sequence of Aulopus japonicus (Teleostci: Aulopiformes), a basal Eurypterygii: Longer DNA sequences and higher-level relationships
-
Kawaguchi A, Miya M, Nishida M (2001) Complete mitochondrial DNA sequence of Aulopus japonicus (Teleostci: Aulopiformes), a basal Eurypterygii: Longer DNA sequences and higher-level relationships. Ichthyol Res 48:213-223
-
(2001)
Ichthyol Res
, vol.48
, pp. 213-223
-
-
Kawaguchi, A.1
Miya, M.2
Nishida, M.3
-
23
-
-
0026573082
-
Leu(UUR) mutation associated with mitochondrial myopathy, encephalopathy, lactic acidosis, and strokelike episodes
-
Leu(UUR) mutation associated with mitochondrial myopathy, encephalopathy, lactic acidosis, and strokelike episodes. Mol Cell Biol 12:480-490
-
(1992)
Mol Cell Biol
, vol.12
, pp. 480-490
-
-
King, M.P.1
Koga, Y.2
Davidson, M.3
Schon, E.A.4
-
24
-
-
0027482104
-
Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
-
Kumazawa Y, Nishida M (1993) Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J Mol Evol 37:380-398
-
(1993)
J Mol Evol
, vol.37
, pp. 380-398
-
-
Kumazawa, Y.1
Nishida, M.2
-
25
-
-
0029096503
-
Variation in mitochondrial tRNA gene organization of reptiles as phylogenetic markers
-
Kumazawa Y, Nishida M (1995) Variation in mitochondrial tRNA gene organization of reptiles as phylogenetic markers. Mol Biol Evol 12:759-772
-
(1995)
Mol Biol Evol
, vol.12
, pp. 759-772
-
-
Kumazawa, Y.1
Nishida, M.2
-
26
-
-
0029909927
-
Gene rearrangements in snake mitochondrial genomes: Highly concerted evolution of control-region-like sequences duplicated and inserted into a tRNA gene cluster
-
Kumazawa Y, Ota H, Nishida M, Ozawa T (1996) Gene rearrangements in snake mitochondrial genomes: Highly concerted evolution of control-region-like sequences duplicated and inserted into a tRNA gene cluster. Mol Biol Evol 13:1242-1254
-
(1996)
Mol Biol Evol
, vol.13
, pp. 1242-1254
-
-
Kumazawa, Y.1
Ota, H.2
Nishida, M.3
Ozawa, T.4
-
27
-
-
0036146407
-
Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: Duplication and non-random loss
-
Lavrov DV, Boore JL, Brown WM (2002) Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: Duplication and non-random loss. Mol Biol Evol 19:163-169
-
(2002)
Mol Biol Evol
, vol.19
, pp. 163-169
-
-
Lavrov, D.V.1
Boore, J.L.2
Brown, W.M.3
-
28
-
-
0023256559
-
Slipped-strand mispairing: A major mechanism for DNA sequence evolution
-
Levinson G, Gutman GA (1987) Slipped-strand mispairing: A major mechanism for DNA sequence evolution. Mol Biol Evol 4:203-221
-
(1987)
Mol Biol Evol
, vol.4
, pp. 203-221
-
-
Levinson, G.1
Gutman, G.A.2
-
30
-
-
0035497972
-
Ser(UCN) precursor with the U7445C substitution, which causes non-syndromic deafness
-
Ser(UCN) precursor with the U7445C substitution, which causes non-syndromic deafness. Nucleic Acids Res 29:4334-4340
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4334-4340
-
-
Levinger, L.1
Jacobs, O.2
James, M.3
-
31
-
-
0031012089
-
The novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome
-
Macey JR, Larson A, Ananjeva NB, Fang Z, Papenfuss TJ (1997) The novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome. Mol Biol Evol 14:91-104
-
(1997)
Mol Biol Evol
, vol.14
, pp. 91-104
-
-
Macey, J.R.1
Larson, A.2
Ananjeva, N.B.3
Fang, Z.4
Papenfuss, T.J.5
-
32
-
-
0031984285
-
Tandem duplication via light-strand synthesis may provide a precursor for mitochondrial genomic rearrangement
-
Macey JR, Schulte II JA, Larson A, Papenfuss TJ (1998) Tandem duplication via light-strand synthesis may provide a precursor for mitochondrial genomic rearrangement. Mol Biol Evol 15:71-75
-
(1998)
Mol Biol Evol
, vol.15
, pp. 71-75
-
-
Macey, J.R.1
Schulte II, J.A.2
Larson, A.3
Papenfuss, T.J.4
-
33
-
-
0034350431
-
Evolution and phylogenetic information content of mitochondrial genomic structual features illustrated with acrodont lizards
-
Macey JR, Schulte II JA, Larson A (2000) Evolution and phylogenetic information content of mitochondrial genomic structual features illustrated with acrodont lizards. Syst Biol 49:257-277
-
(2000)
Syst Biol
, vol.49
, pp. 257-277
-
-
Macey, J.R.1
Schulte II, J.A.2
Larson, A.3
-
34
-
-
0030734732
-
Large, rapidly evolving intergenic spacers in the mitochondrial DNA of the salamander family Ambystomatidae (Amphibia: Caudata)
-
McKnight ML, Schaffer HB (1997) Large, rapidly evolving intergenic spacers in the mitochondrial DNA of the salamander family Ambystomatidae (Amphibia: Caudata). Mol Biol Evol 14:1167-1176
-
(1997)
Mol Biol Evol
, vol.14
, pp. 1167-1176
-
-
McKnight, M.L.1
Schaffer, H.B.2
-
35
-
-
0002382573
-
The genomic tag hypothesis: What molecular fossils tell us about the evolution of tRNA
-
Gesteland R, Cech T, Atkins J (eds) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Maizels N, Weiner AM (1999) The genomic tag hypothesis: What molecular fossils tell us about the evolution of tRNA. In: Gesteland R, Cech T, Atkins J (eds) The RNA world. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp 79-111
-
(1999)
The RNA World. 2nd Ed.
, pp. 79-111
-
-
Maizels, N.1
Weiner, A.M.2
-
36
-
-
0033191527
-
Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): First example of transfer RNA gene rearrangements in bony fishes
-
Miya M, Nishida M (1999) Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): first example of transfer RNA gene rearrangements in bony fishes. Mar Biotechnol 1:416-426
-
(1999)
Mar Biotechnol
, vol.1
, pp. 416-426
-
-
Miya, M.1
Nishida, M.2
-
37
-
-
0034497887
-
Use of mitogenomic information in teleostean molecular phylogenetics: A tree-based exploration under the maximum-parsimony optimality criterion
-
Miya M, Nishida M (2000) Use of mitogenomic information in teleostean molecular phylogenetics: A tree-based exploration under the maximum-parsimony optimality criterion. Mol Phylogenet Evol 17:437-455
-
(2000)
Mol Phylogenet Evol
, vol.17
, pp. 437-455
-
-
Miya, M.1
Nishida, M.2
-
38
-
-
0034749003
-
Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences
-
Miya M, Kawaguchi A, Nishida M (2001) Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences. Mol Biol Evol 18:1993-2009
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1993-2009
-
-
Miya, M.1
Kawaguchi, A.2
Nishida, M.3
-
39
-
-
0037215848
-
Major patterns of higher teleostean phylogenies: A new perspective based on 100 complete mitochondrial DNA sequences
-
Miya M, Takeshima H, Endo H, Ishiguro NB, Inoue JG, Mukai T, Satoh TP, Yamaguchi M, Kawaguchi A, Mabuchi K, Shirai SM, Nishida M (2003) Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences. Mol Phylogenet Evol 26:121-138
-
(2003)
Mol Phylogenet Evol
, vol.26
, pp. 121-138
-
-
Miya, M.1
Takeshima, H.2
Endo, H.3
Ishiguro, N.B.4
Inoue, J.G.5
Mukai, T.6
Satoh, T.P.7
Yamaguchi, M.8
Kawaguchi, A.9
Mabuchi, K.10
Shirai, S.M.11
Nishida, M.12
-
40
-
-
0023433511
-
Tandem duplications in animal mitochondrial DNAs: Variation in incidence and gene content among lizards
-
Moritz C, Brown WM (1987) Tandem duplications in animal mitochondrial DNAs: Variation in incidence and gene content among lizards. Proc Natl Acad Sci USA 84:7183-7187
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7183-7187
-
-
Moritz, C.1
Brown, W.M.2
-
42
-
-
0345058330
-
Importance and restrictions of the otolith-based fossil record of Gadiform and Ophidiiform fishes
-
Cohen DM (ed) Sci Ser No 32 Nat Hist Mus Los Angeles County, Los Angeles, CA
-
Nolf D, Steurbaut E (1989) Importance and restrictions of the otolith-based fossil record of Gadiform and Ophidiiform fishes. In: Cohen DM (ed) Papers on the systematics of gadiform fishes. Sci Ser No 32 Nat Hist Mus Los Angeles County, Los Angeles, CA, pp 47-58
-
(1989)
Papers on the Systematics of Gadiform Fishes
, pp. 47-58
-
-
Nolf, D.1
Steurbaut, E.2
-
43
-
-
0019444843
-
tRNA punctuation model of RNA processing in human mitochondria
-
Ojala D, Montoya J, Attardi G (1981) tRNA punctuation model of RNA processing in human mitochondria. Nature 290:470-474
-
(1981)
Nature
, vol.290
, pp. 470-474
-
-
Ojala, D.1
Montoya, J.2
Attardi, G.3
-
44
-
-
0002011392
-
An annotated checklist of the species of the labroid fish families Labridae and Scaridae
-
Parenti P, Randall JE (2000) An annotated checklist of the species of the labroid fish families Labridae and Scaridae. Ichthyol Bull JLB Smith Inst Ichthyol 68:1-97
-
(2000)
Ichthyol Bull JLB Smith Inst Ichthyol
, vol.68
, pp. 1-97
-
-
Parenti, P.1
Randall, J.E.2
-
45
-
-
0027219130
-
Endotherms, ectotherms, and mitochondrial genome size variation
-
Rand DM (1993) Endotherms, ectotherms, and mitochondrial genome size variation. J Mol Evol 37:281-295
-
(1993)
J Mol Evol
, vol.37
, pp. 281-295
-
-
Rand, D.M.1
-
46
-
-
0032555354
-
Leu(UUR) associated with mitochondrial diseases
-
Leu(UUR) associated with mitochondrial diseases. FEBS Lett 433:269-274
-
(1998)
FEBS Lett
, vol.433
, pp. 269-274
-
-
Rossmanith, W.1
Karwan, R.M.2
-
47
-
-
0029048832
-
Human mitochondrial tRNA processing
-
Rossmanith W, Tullo A, Potushak T, Karwan R, Sbis E (1995) Human mitochondrial tRNA processing. J Biol Chem 270:12885-12891
-
(1995)
J Biol Chem
, vol.270
, pp. 12885-12891
-
-
Rossmanith, W.1
Tullo, A.2
Potushak, T.3
Karwan, R.4
Sbis, E.5
-
48
-
-
0023375195
-
The neighbor-joining method: A new-method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: A new-method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
49
-
-
0035987385
-
Evolutionary history of the parrotfishes: Biogeography, ecomorphology, and comparative diversity
-
Streelman JT, Alfaro M, Westneat MW, Bellwood DR, Karl SA (2002) Evolutionary history of the parrotfishes: Biogeography, ecomorphology, and comparative diversity. Evolution 56:961-971
-
(2002)
Evolution
, vol.56
, pp. 961-971
-
-
Streelman, J.T.1
Alfaro, M.2
Westneat, M.W.3
Bellwood, D.R.4
Karl, S.A.5
-
51
-
-
0031574072
-
The ClustalX-Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak E, Jeanmougin F, Higgins DG (1997) The ClustalX-Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, E.3
Jeanmougin, F.4
Higgins, D.G.5
-
52
-
-
0019887587
-
Sequence and properties of the human KB cell and mouse L cell D-loop regions of mitochondrial DNA
-
Walberg NW, Clayton DA (1981) Sequence and properties of the human KB cell and mouse L cell D-loop regions of mitochondrial DNA. Nucleic Acids Res 9:5411-5421
-
(1981)
Nucleic Acids Res
, vol.9
, pp. 5411-5421
-
-
Walberg, N.W.1
Clayton, D.A.2
|