Genomic structure of chromosome 17 deletions in BRCA1-associated ovarian cancers

Cancer Genetics and Cytogenetics

Volumn 183, Issue 1, 2008, Pages 41-48

  Chisholm, Karen M ^a,b   Goff, Barbara A ^b   Garcia, Rochelle ^a   King, Mary Claire ^a,b   Swisher, Elizabeth M ^b  

^a UNIVERSITY OF WASHINGTON   (United States)

^b UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ALU SEQUENCE; ARTICLE; CHROMOSOME 17; CLINICAL ARTICLE; FEMALE; GENE DELETION; GENE STRUCTURE; HETEROZYGOSITY LOSS; HUMAN; HUMAN TISSUE; MICROSATELLITE MARKER; ONCOGENE; OVARY CANCER; PRIORITY JOURNAL; SHORT INTERSPERSED REPEAT; SINGLE NUCLEOTIDE POLYMORPHISM;

ADULT; AGED; CARCINOMA; CHROMOSOME DELETION; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 17; CYSTADENOCARCINOMA, PAPILLARY; FEMALE; GENES, BRCA1; HUMANS; LOSS OF HETEROZYGOSITY; MIDDLE AGED; OVARIAN NEOPLASMS; REPETITIVE SEQUENCES, NUCLEIC ACID;

EID: 43049160853     PISSN: 01654608     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cancergencyto.2008.02.004     Document Type: Article

References (33)

1. American Cancer Society. Cancer Facts and Figures 2007. Available at:. http://www.cancer.org/docroot/STT/content/STT_1x_Cancer_Facts__Figures_2007.asp Accessed November 24, 2007
2. Risch H.A., McLaughlin J.R., Cole D.E., Rosen B., Bradley L., Kwan E., Jack E., Vesprini D.J., Kuperstein G., Abrahamson J.L., Fan I., Wong B., and Narod S.A. Prevalence and penetrance of germline BRCA1 and BRCA2 mutations in a population series of 649 women with ovarian cancer. Am J Hum Genet 68 (2001) 700-710
3. King M.C., Marks J.H., and Mandell J.B. Breast and ovarian cancer risks due to inherited mutations in BRCA1 and BRCA2. Science 302 (2003) 643-646
4. Knudson Jr. A.G. Mutation and cancer: statistical study of retinoblastoma. Proc Natl Acad Sci USA 68 (1971) 820-823
5. Israeli O., Gotlieb W.H., Friedman E., Goldman B., Ben-Baruch G., Aviram-Goldring A., and Rienstein S. Familial vs sporadic ovarian tumors: characteristic genomic alterations analyzed by CGH. Gynecol Oncol 90 (2003) 629-636
6. Tapper J., Sarantaus L., Vahteristo P., Nevanlinna H., Hemmer S., Seppala M., Knuutila S., and Butzow R. Genetic changes in inherited and sporadic ovarian carcinomas by comparative genomic hybridization: extensive similarity except for a difference at chromosome 2q24∼q32. Cancer Res 58 (1998) 2715-2719
7. Ramus S.J., Pharoah P.D., Harrington P., Pye C., Werness B., Bobrow L., Ayhan A., Wells D., Fishman A., Gore M., DiCioccio R.A., Piver M.S., Whittemore A.S., Ponder B.A., and Gayther S.A. BRCA1/2 mutation status influences somatic genetic progression in inherited and sporadic epithelial ovarian cancer cases. Cancer Res 63 (2003) 417-423
8. Eccles D.M., Cranston G., Steel C.M., Nakamura Y., and Leonard R.C. Allele losses on chromosome 17 in human epithelial ovarian carcinoma. Oncogene 5 (1990) 1599-1601
9. Lee J.H., Kavanagh J.J., Wildrick D.M., Wharton J.T., and Blick M. Frequent loss of heterozygosity on chromosomes 6q, 11, and 17 in human ovarian carcinomas. Cancer Res 50 (1990) 2724-2728
10. Russell S.E., Hickey G.I., Lowry W.S., White P., and Atkinson R.J. Allele loss from chromosome 17 in ovarian cancer. Oncogene 5 (1990) 1581-1583
11. Sato T., Saito H., Morita R., Koi S., Lee J.H., and Nakamura Y. Allelotype of human ovarian cancer. Cancer Res 51 (1991) 5118-5122
12. Foulkes W.D., Black D.M., Stamp G.W., Solomon E., and Trowsdale J. Very frequent loss of heterozygosity throughout chromosome 17 in sporadic ovarian carcinoma. Int J Cancer 54 (1993) 220-225
13. Phillips N., Ziegler M., Saha B., and Xynos F. Allelic loss on chromosome 17 in human ovarian cancer. Int J Cancer 54 (1993) 85-91
14. Tavassoli M., Ruhrberg C., Beaumont V., Reynolds K., Kirkham N., Collins W.P., and Farzaneh F. Whole chromosome 17 loss in ovarian cancer. Genes Chromosomes Cancer 8 (1993) 195-198
15. Pieretti M., Cavalieri C., Conway P.S., Gallion H.H., Powell D.E., and Turker M.S. Genetic alterations distinguish different types of ovarian tumors. Int J Cancer 64 (1995) 434-440
16. Papp J., Csokay B., Bosze P., Zalay Z., Toth J., Ponder B., and Olah E. Allele loss from large regions of chromosome 17 is common only in certain histologic subtypes of ovarian carcinomas. Br J Cancer 74 (1996) 1592-1597
17. Presneau N., Dewar K., Forgetta V., Provencher D., Mes-Masson A.M., and Tonin P.N. Loss of heterozygosity and transcriptome analyses of a 1.2 Mb candidate ovarian cancer tumor suppressor locus region at 17q25.1∼q25.2. Mol Carcinogen 43 (2005) 141-154
18. Smith T.M., Lee M.K., Szabo C.I., Jerome N., McEuen M., Taylor M., Hood L., and King M.C. Complete genomic sequence and analysis of 117 kb of human DNA containing the gene BRCA1. Genome Res 6 (1996) 1029-1049
19. Korenberg J.R., and Rykowski M.C. Human genome organization: Alu, lines, and the molecular structure of metaphase chromosome bands. Cell 53 (1988) 391-400
20. Morgan W.F., and Crossen P.E. The frequency and distribution of sister chromatid exchanges in human chromosomes. Hum Genet 38 (1977) 271-278
21. Mazoyer S. Genomic rearrangements in the BRCA1 and BRCA2 genes. Hum Mutat 25 (2005) 415-422
22. Walsh T., Casadei S., Coats K.H., Swisher E., Stray S.M., Higgins J., Roach K.C., Mandell J., Lee M.K., Ciernikova S., Foretova L., Soucek P., and King M.C. Spectrum of mutations in BRCA1, BRCA2, CHEK2, and TP53 in families at high risk of breast cancer. Jama 295 (2006) 1379-1388
23. Welcsh P.L., and King M.C. BRCA1 and BRCA2 and the genetics of breast and ovarian cancer. Hum Mol Genet 10 (2001) 705-713
24. Smit A.F. Interspersed repeats and other mementos of transposable elements in mammalian genomes. Curr Opin Genet Dev 9 (1999) 657-663
25. Werness B.A., Ramus S.J., Whittemore A.S., Garlinghouse-Jones K., Oakley-Girvan I., Dicioccio R.A., Tsukada Y., Ponder B.A., and Piver M.S. Histopathology of familial ovarian tumors in women from families with and without germline BRCA1 mutations. Hum Pathol 31 (2000) 1420-1424
26. Gorletta T.A., Gasparini P., D'Elios M.M., Trubia M., Pelicci P.G., and Di Fiore P.P. Frequent loss of heterozygosity without loss of genetic material in acute myeloid leukemia with a normal karyotype. Genes Chromosomes Cancer 44 (2005) 334-337
27. Fearon E.R., Vogelstein B., and Feinberg A.P. Somatic deletion and duplication of genes on chromosome 11 in Wilms' tumours. Nature 309 (1984) 176-178
28. Shearer P.D., Valentine M.B., Grundy P., DeCou J.M., Banavali S.D., Komuro H., Green D.M., Beckwith J.B., and Look A.T. Hemizygous deletions of chromosome band 16q24 in Wilms' tumor: detection by fluorescence in situ hybridization. Cancer Genet Cytogenet 115 (1999) 100-105
29. Murthy S.K., DiFrancesco L.M., Ogilvie R.T., and Demetrick D.J. Loss of heterozygosity associated with uniparental disomy in breast carcinoma. Mod Pathol 15 (2002) 1241-1250
30. McEvoy C.R., Morley A.A., and Firgaira F.A. Evidence for whole chromosome 6 loss and duplication of the remaining chromosome in acute lymphoblastic leukemia. Genes Chromosomes Cancer 37 (2003) 321-325
31. White V.A., McNeil B.K., and Horsman D.E. Acquired homozygosity (isodisomy) of chromosome 3 in uveal melanoma. Cancer Genet Cytogenet 102 (1998) 40-45
32. Henry I., Bonaiti-Pellie C., Chehensse V., Beldjord C., Schwartz C., Utermann G., and Junien C. Uniparental paternal disomy in a genetic cancer-predisposing syndrome. Nature 351 (1991) 665-667
33. Kralovics R., Guan Y., and Prchal J.T. Acquired uniparental disomy of chromosome 9p is a frequent stem cell defect in polycythemia vera. Exp Hematol 30 (2002) 229-236