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Volumn 74, Issue 9, 2008, Pages 2627-2636

Global response to desiccation stress in the soil actinomycete Rhodococcus jostii RHA1

Author keywords

[No Author keywords available]

Indexed keywords

BIOREMEDIATION; CONTAMINATION; METABOLISM; SCANNING ELECTRON MICROSCOPY; SOIL POLLUTION; SOILS;

EID: 43049126811     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02711-07     Document Type: Article
Times cited : (106)

References (46)
  • 1
    • 0027083350 scopus 로고
    • A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli
    • Almiron, M., A. J. Link, D. Furlong, and R. Kolter. 1992. A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli. Genes Dev. 6:2646-2654.
    • (1992) Genes Dev , vol.6 , pp. 2646-2654
    • Almiron, M.1    Link, A.J.2    Furlong, D.3    Kolter, R.4
  • 4
    • 0037162469 scopus 로고    scopus 로고
    • Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
    • Bernstein, J. A., A. B. Khodursky, P.-H. Lin, S. Lin-Chao, and S. N. Cohen. 2002. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc. Natl. Acad. Sci. USA 99:9697-9702.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 9697-9702
    • Bernstein, J.A.1    Khodursky, A.B.2    Lin, P.-H.3    Lin-Chao, S.4    Cohen, S.N.5
  • 7
    • 1842300407 scopus 로고    scopus 로고
    • Isolation and characterization of salt-sensitive mutants of the moderate halophile Halomonas elongata and cloning of the ectoine synthesis genes
    • Canovas, D., C. Vargas, F. Iglesias-Guerra, L. N. Csonka, D. Rhodes, A. Ventosa, and J. J. Nieto. 1997. Isolation and characterization of salt-sensitive mutants of the moderate halophile Halomonas elongata and cloning of the ectoine synthesis genes. J. Biol. Chem. 272:25794-25801.
    • (1997) J. Biol. Chem , vol.272 , pp. 25794-25801
    • Canovas, D.1    Vargas, C.2    Iglesias-Guerra, F.3    Csonka, L.N.4    Rhodes, D.5    Ventosa, A.6    Nieto, J.J.7
  • 8
    • 27144476584 scopus 로고    scopus 로고
    • Reassessment of protein stability, DNA binding, and protection of Mycobacterium smegmatis Dps
    • Ceci, P., A. Ilari, E. Falvo, L. Giangiacomo, and E. Chiancone. 2005. Reassessment of protein stability, DNA binding, and protection of Mycobacterium smegmatis Dps. J. Biol. Chem. 280:34776-34785.
    • (2005) J. Biol. Chem , vol.280 , pp. 34776-34785
    • Ceci, P.1    Ilari, A.2    Falvo, E.3    Giangiacomo, L.4    Chiancone, E.5
  • 9
    • 0027105308 scopus 로고
    • Anhydrobiosis: A strategy for survival
    • Crowe, L. M., and J. H. Crowe. 1992. Anhydrobiosis: a strategy for survival. Adv. Space Res. 12:239-247.
    • (1992) Adv. Space Res , vol.12 , pp. 239-247
    • Crowe, L.M.1    Crowe, J.H.2
  • 12
    • 0037263812 scopus 로고    scopus 로고
    • MAPPFinder: Using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
    • Doniger, S. W., N. Salomonis, K. D. Dahlquist, K. Vranizan, S. C. Lawlor, and B. R. Conklin. 2003. MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol. 4:R7.
    • (2003) Genome Biol , vol.4
    • Doniger, S.W.1    Salomonis, N.2    Dahlquist, K.D.3    Vranizan, K.4    Lawlor, S.C.5    Conklin, B.R.6
  • 13
    • 43049118363 scopus 로고    scopus 로고
    • Transcriptomic analysis of Rhodococcus sp
    • M.S. thesis. University of British Columbia, Vancouver, Canada
    • Ekpanyaskun, P. 2006. Transcriptomic analysis of Rhodococcus sp. RHA1 responses to heat shock and osmotic stress. M.S. thesis. University of British Columbia, Vancouver, Canada.
    • (2006) RHA1 responses to heat shock and osmotic stress
    • Ekpanyaskun, P.1
  • 15
    • 18844381611 scopus 로고    scopus 로고
    • Stress responses in mycobacteria
    • Gupta, S., and D. Chatterji. 2005. Stress responses in mycobacteria. IUBMB Life 57:149-159.
    • (2005) IUBMB Life , vol.57 , pp. 149-159
    • Gupta, S.1    Chatterji, D.2
  • 16
    • 2642561830 scopus 로고    scopus 로고
    • Can whole genome analysis refine the taxonomy of the genus Rhodococcus?
    • Gurtler, V., B. C. Mayall, and R. Seviour. 2004. Can whole genome analysis refine the taxonomy of the genus Rhodococcus? FEMS Microbiol. Rev. 28:377-403.
    • (2004) FEMS Microbiol. Rev , vol.28 , pp. 377-403
    • Gurtler, V.1    Mayall, B.C.2    Seviour, R.3
  • 17
    • 33645537217 scopus 로고    scopus 로고
    • The role of a gene cluster for trehalose metabolism in dehydration tolerance of the filamentous cyanobacterium Anabaena sp. PCC7120
    • Higo, A., H. Katoh, K. Ohmori, M. Ikeuchi, and M. Ohmori. 2006. The role of a gene cluster for trehalose metabolism in dehydration tolerance of the filamentous cyanobacterium Anabaena sp. PCC7120. Microbiology 152:979-987.
    • (2006) Microbiology , vol.152 , pp. 979-987
    • Higo, A.1    Katoh, H.2    Ohmori, K.3    Ikeuchi, M.4    Ohmori, M.5
  • 18
    • 32044468063 scopus 로고    scopus 로고
    • Ability of Shiga toxin-producing Escherichia coli and Salmonella spp. to survive in a desiccation model system and in dry foods
    • Hiramatsu, R., M. Matsumoto, K. Sakae, and Y. Miyazaki. 2005. Ability of Shiga toxin-producing Escherichia coli and Salmonella spp. to survive in a desiccation model system and in dry foods. Appl. Environ. Microbiol. 71: 6657-6663.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 6657-6663
    • Hiramatsu, R.1    Matsumoto, M.2    Sakae, K.3    Miyazaki, Y.4
  • 19
    • 33744803754 scopus 로고    scopus 로고
    • Helicobacter hepaticus Dps protein plays an important role in protecting DNA from oxidative damage
    • Hong, Y., G. Wang, and R. J. Maier. 2006. Helicobacter hepaticus Dps protein plays an important role in protecting DNA from oxidative damage. Free Radic. Res. 40:597-605.
    • (2006) Free Radic. Res , vol.40 , pp. 597-605
    • Hong, Y.1    Wang, G.2    Maier, R.J.3
  • 20
    • 0028107826 scopus 로고
    • Resistance of bacterial strains to dry conditions: Use of anhydrous silica gel in a desiccation model system
    • Janning, B., P. H. In't Veld, S. Notermans, and J. Krämer. 1994. Resistance of bacterial strains to dry conditions: use of anhydrous silica gel in a desiccation model system. J. Appl. Bacteriol. 77:319-324.
    • (1994) J. Appl. Bacteriol , vol.77 , pp. 319-324
    • Janning, B.1    In't Veld, P.H.2    Notermans, S.3    Krämer, J.4
  • 21
    • 1942536792 scopus 로고    scopus 로고
    • Gene expression in the cyanobacterium Anabaena sp. PCC7120 under desiccation
    • Katoh, H., R. K. Asthana, and M. Ohmori. 2004. Gene expression in the cyanobacterium Anabaena sp. PCC7120 under desiccation. Microb. Ecol. 47:164-174.
    • (2004) Microb. Ecol , vol.47 , pp. 164-174
    • Katoh, H.1    Asthana, R.K.2    Ohmori, M.3
  • 22
    • 0024562664 scopus 로고
    • Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102
    • Kimbara, K., T. Hashimoto, M. Fukuda, T. Koana, M. Takagi, M. Oishi, and K. Yano. 1989. Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102. J. Bacteriol. 171:2740-2747.
    • (1989) J. Bacteriol , vol.171 , pp. 2740-2747
    • Kimbara, K.1    Hashimoto, T.2    Fukuda, M.3    Koana, T.4    Takagi, M.5    Oishi, M.6    Yano, K.7
  • 24
    • 0030811135 scopus 로고    scopus 로고
    • Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps
    • Martinez, A., and R. Kolter. 1997. Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps. J. Bacteriol. 179:5188-5194.
    • (1997) J. Bacteriol , vol.179 , pp. 5188-5194
    • Martinez, A.1    Kolter, R.2
  • 25
    • 0030049354 scopus 로고    scopus 로고
    • Radioresistance of Deinococcus radiodurans: Functions necessary to survive ionizing radiation are also necessary to survive prolonged desiccation
    • Mattimore, V., and J. R. Battista. 1996. Radioresistance of Deinococcus radiodurans: functions necessary to survive ionizing radiation are also necessary to survive prolonged desiccation. J. Bacteriol. 178:633-637.
    • (1996) J. Bacteriol , vol.178 , pp. 633-637
    • Mattimore, V.1    Battista, J.R.2
  • 26
    • 33746191929 scopus 로고    scopus 로고
    • McLeod, M. P., R. L. Warren, W. W. L. Hsiao, N. Araki, M. Myhre, C. Fernandes, D. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. M. Jones, R. Holt, F. S. L. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, and L. D. Eltis. 2006. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc. Natl. Acad. Sci. USA 103:15582-15587.
    • McLeod, M. P., R. L. Warren, W. W. L. Hsiao, N. Araki, M. Myhre, C. Fernandes, D. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. M. Jones, R. Holt, F. S. L. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, and L. D. Eltis. 2006. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc. Natl. Acad. Sci. USA 103:15582-15587.
  • 27
    • 84981839939 scopus 로고
    • Numbers of bacteria and actinomycetes in a Kenya soil
    • Meiklejohn, J. 1957. Numbers of bacteria and actinomycetes in a Kenya soil. Eur. J. Soil Sci. 8:240-247.
    • (1957) Eur. J. Soil Sci , vol.8 , pp. 240-247
    • Meiklejohn, J.1
  • 28
    • 0042367743 scopus 로고    scopus 로고
    • Magnitude and kinetics of rehydration influence the viability of dehydrated E. coli K-12
    • Mille, Y., L. Beney, and P. Gervais. 2003. Magnitude and kinetics of rehydration influence the viability of dehydrated E. coli K-12. Biotechnol. Bioeng. 83:578-582.
    • (2003) Biotechnol. Bioeng , vol.83 , pp. 578-582
    • Mille, Y.1    Beney, L.2    Gervais, P.3
  • 29
    • 3042662444 scopus 로고    scopus 로고
    • Dps protects cells against multiple stresses during stationary phase
    • Nair, S., and S. E. Finkel. 2004. Dps protects cells against multiple stresses during stationary phase. J. Bacteriol. 186:4192-4198.
    • (2004) J. Bacteriol , vol.186 , pp. 4192-4198
    • Nair, S.1    Finkel, S.E.2
  • 30
    • 15844374760 scopus 로고    scopus 로고
    • The Dps-like protein Fri of Listeria monocytogenes promotes stress tolerance and intracellular multiplication in macrophage-like cells
    • Olsen, K. N., M. H. Larsen, C. G. M. Gahan, B. Kallipolitis, X. A. Wolf, R. Rea, C. Hill, and H. Ingmer. 2005. The Dps-like protein Fri of Listeria monocytogenes promotes stress tolerance and intracellular multiplication in macrophage-like cells. Microbiology 151:925-933.
    • (2005) Microbiology , vol.151 , pp. 925-933
    • Olsen, K.N.1    Larsen, M.H.2    Gahan, C.G.M.3    Kallipolitis, B.4    Wolf, X.A.5    Rea, R.6    Hill, C.7    Ingmer, H.8
  • 31
    • 0031786886 scopus 로고    scopus 로고
    • Exocellular polysaccharides from cyanobacteria and their possible applications
    • Philippis, R., and M. Vincenzini. 1998. Exocellular polysaccharides from cyanobacteria and their possible applications. FEMS Microbiol. Rev. 22: 151-175.
    • (1998) FEMS Microbiol. Rev , vol.22 , pp. 151-175
    • Philippis, R.1    Vincenzini, M.2
  • 33
    • 0033862345 scopus 로고    scopus 로고
    • Influence of crude oil contamination on the bacterial community of semiarid soils of Patagonia (Argentina)
    • Pucci, O. H., M. A. Bak, S. R. Peressutti, I. Klein, C. Härtig, H. M. Alvarez, and L. Wünsche. 2000. Influence of crude oil contamination on the bacterial community of semiarid soils of Patagonia (Argentina). Acta Biotechnol. 20:129-146.
    • (2000) Acta Biotechnol , vol.20 , pp. 129-146
    • Pucci, O.H.1    Bak, M.A.2    Peressutti, S.R.3    Klein, I.4    Härtig, C.5    Alvarez, H.M.6    Wünsche, L.7
  • 35
    • 0042381487 scopus 로고    scopus 로고
    • Effect of trehalose on survival of Bradyrhizobium japonicum during desiccation
    • Streeter, J. G. 2003. Effect of trehalose on survival of Bradyrhizobium japonicum during desiccation. J. Appl. Microbiol. 95:484-491.
    • (2003) J. Appl. Microbiol , vol.95 , pp. 484-491
    • Streeter, J.G.1
  • 36
    • 5144234957 scopus 로고    scopus 로고
    • Analysis of Deinococcus radiodurans's transcriptional response to ionizing radiation and desiccation reveals novel proteins that contribute to extreme radioresistance
    • Tanaka, M., A. M. Earl, H. A. Howell, M.-J. Park, J. A. Eisen, S. N. Peterson, and J. R. Battista. 2004. Analysis of Deinococcus radiodurans's transcriptional response to ionizing radiation and desiccation reveals novel proteins that contribute to extreme radioresistance. Genetics 168:21-33.
    • (2004) Genetics , vol.168 , pp. 21-33
    • Tanaka, M.1    Earl, A.M.2    Howell, H.A.3    Park, M.-J.4    Eisen, J.A.5    Peterson, S.N.6    Battista, J.R.7
  • 37
    • 0035875553 scopus 로고    scopus 로고
    • Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
    • Tseng, G. C., M.-K. Oh, L. Rohlin, J. C. Liao, and W. H. Wong. 2001. Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res. 29:2549-2557.
    • (2001) Nucleic Acids Res , vol.29 , pp. 2549-2557
    • Tseng, G.C.1    Oh, M.-K.2    Rohlin, L.3    Liao, J.C.4    Wong, W.H.5
  • 39
    • 0025685589 scopus 로고
    • Cryoscanning electron microscopy of a layer of extracellular polysaccharides produced by bacterial colonies
    • van Doorn, W. G., F. Thiel, and A. Boekestein. 1990. Cryoscanning electron microscopy of a layer of extracellular polysaccharides produced by bacterial colonies. Scanning 12:297-299.
    • (1990) Scanning , vol.12 , pp. 297-299
    • van Doorn, W.G.1    Thiel, F.2    Boekestein, A.3
  • 40
    • 0032586856 scopus 로고    scopus 로고
    • B-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis
    • B-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis. J. Bacteriol. 181:3942-3948.
    • (1999) J. Bacteriol , vol.181 , pp. 3942-3948
    • Volker, U.1    Maul, B.2    Hecker, M.3
  • 41
    • 0034032756 scopus 로고    scopus 로고
    • Ecological significance of compatible solute accumulation by micro-organisms: From single cells to global climate
    • Welsh, D. T. 2000. Ecological significance of compatible solute accumulation by micro-organisms: from single cells to global climate. FEMS Microbiol. Rev. 24:263-290.
    • (2000) FEMS Microbiol. Rev , vol.24 , pp. 263-290
    • Welsh, D.T.1
  • 42
    • 0002561323 scopus 로고
    • Studies of the ecology of actinomycetes in soil. VI. The influence of moisture tension on growth and survival
    • Williams, S. T., M. Shameemullah, E. T. Watson, and C. I. Mayfield. 1972. Studies of the ecology of actinomycetes in soil. VI. The influence of moisture tension on growth and survival. Soil Biol. Biochem. 4:215-225.
    • (1972) Soil Biol. Biochem , vol.4 , pp. 215-225
    • Williams, S.T.1    Shameemullah, M.2    Watson, E.T.3    Mayfield, C.I.4
  • 44
    • 33750983614 scopus 로고    scopus 로고
    • Bacterial survival in evaporating deposited droplets on a teflon-coated surface
    • Xie, X., Y. Li, T. Zhang, and H. H. P. Fang. 2006. Bacterial survival in evaporating deposited droplets on a teflon-coated surface. Appl. Microbiol. Biotechnol. 73:703-712.
    • (2006) Appl. Microbiol. Biotechnol , vol.73 , pp. 703-712
    • Xie, X.1    Li, Y.2    Zhang, T.3    Fang, H.H.P.4
  • 45
    • 0031779621 scopus 로고    scopus 로고
    • Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1
    • Yamada, A., H. Kishi, K. Sugiyama, T. Hatta, K. Nakamura, E. Masai, and M. Fukuda. 1998. Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1. Appl. Environ. Microbiol. 64:2006-2012.
    • (1998) Appl. Environ. Microbiol , vol.64 , pp. 2006-2012
    • Yamada, A.1    Kishi, H.2    Sugiyama, K.3    Hatta, T.4    Nakamura, K.5    Masai, E.6    Fukuda, M.7
  • 46
    • 0037008743 scopus 로고    scopus 로고
    • Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritin-like DNA-binding protein of Escherichia coli
    • Zhao, G., P. Ceci, A. Ilari, L. Giangiacomo, T. M. Laue, E. Chiancone, and N. D. Chasteen. 2002. Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritin-like DNA-binding protein of Escherichia coli. J. Biol. Chem. 277:27689-27696.
    • (2002) J. Biol. Chem , vol.277 , pp. 27689-27696
    • Zhao, G.1    Ceci, P.2    Ilari, A.3    Giangiacomo, L.4    Laue, T.M.5    Chiancone, E.6    Chasteen, N.D.7


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