메뉴 건너뛰기




Volumn , Issue , 2006, Pages

Prediction of transcription factor binding sites using genetic algorithm

Author keywords

GA; PSSM; TFBS

Indexed keywords

BINDING ENERGY; ENCODING (SYMBOLS); GENES; MATRIX ALGEBRA; PROBLEM SOLVING; TRANSCRIPTION;

EID: 42749102748     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICIEA.2006.257271     Document Type: Conference Paper
Times cited : (3)

References (14)
  • 1
    • 0037464588 scopus 로고    scopus 로고
    • Collins F, Green E, Guttmacher A, Guyer M. US National Human Genome Institute: A vision for the future of genomics research. Nature 2003, 422:835-847.
    • Collins F, Green E, Guttmacher A, Guyer M. US National Human Genome Institute: A vision for the future of genomics research. Nature 2003, 422:835-847.
  • 2
    • 0034072450 scopus 로고    scopus 로고
    • DNA binding sites: Representation and discovery
    • Stormo G: DNA binding sites: representation and discovery. Bioinformatics 2000, 16:16-23.
    • (2000) Bioinformatics , vol.16 , pp. 16-23
    • Stormo, G.1
  • 3
    • 0742306815 scopus 로고    scopus 로고
    • Computational prediction of transcription-factor binding site locations
    • Bulyk ML: Computational prediction of transcription-factor binding site locations. Genome Biol 2003, 5:201.
    • (2003) Genome Biol , vol.5 , pp. 201
    • Bulyk, M.L.1
  • 5
    • 0034656326 scopus 로고    scopus 로고
    • Discovering regulatory elements in non-coding sequences by analysis of spaced dyads
    • Van Helden J, Rios AF, Collado-Vides J: Discovering regulatory elements in non-coding sequences by analysis of spaced dyads. Nucleic Acids Res 2000, 28:1808-1818.
    • (2000) Nucleic Acids Res , vol.28 , pp. 1808-1818
    • Van Helden, J.1    Rios, A.F.2    Collado-Vides, J.3
  • 6
    • 2342476143 scopus 로고    scopus 로고
    • Finding subtle motifs by branching from sample strings
    • Price A, Ramabhadran S, Pevzner PA: Finding subtle motifs by branching from sample strings. Bioinformatics 2003, 19(Suppl 2):II149-II155.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 2
    • Price, A.1    Ramabhadran, S.2    Pevzner, P.A.3
  • 7
    • 0035228215 scopus 로고    scopus 로고
    • BioProspector: Discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes
    • Liu X, Brutlag DL, Liu JS: BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes. Pac Symp Biocomput 2001:127-138.
    • (2001) Pac Symp Biocomput , pp. 127-138
    • Liu, X.1    Brutlag, D.L.2    Liu, J.S.3
  • 8
    • 85142148584 scopus 로고    scopus 로고
    • Ben-Gal A. Shani A. Gohr: Identification of transcription factor binding sites with variable-order Bayesian networks Bioinformatics 2005, 21: 1657-2666
    • Ben-Gal A. Shani A. Gohr: Identification of transcription factor binding sites with variable-order Bayesian networks Bioinformatics 2005, 21: 1657-2666
  • 9
    • 0031855197 scopus 로고    scopus 로고
    • Automatic extraction of motifs represented in the hidden Markov model from a number of DNA sequences
    • Yada T, Totoki Y, Ishikawa M, Asai K, Nakai K: Automatic extraction of motifs represented in the hidden Markov model from a number of DNA sequences. Bioinformatics 1998, 14:317-325.
    • (1998) Bioinformatics , vol.14 , pp. 317-325
    • Yada, T.1    Totoki, Y.2    Ishikawa, M.3    Asai, K.4    Nakai, K.5
  • 11
    • 0032826179 scopus 로고    scopus 로고
    • Gary D.Stormo: Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
    • Gerald A.Hertz, Gary D.Stormo: Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics 1999, 15:563-577
    • (1999) Bioinformatics , vol.15 , pp. 563-577
    • Hertz, G.A.1
  • 12
    • 0032861774 scopus 로고    scopus 로고
    • SCPD: A promoter database of the yeast Saccharomyces cerevisiae
    • Zhu J, Zhang MQ: SCPD: a promoter database of the yeast Saccharomyces cerevisiae. Bioinformatics 1999, 15:607-611.
    • (1999) Bioinformatics , vol.15 , pp. 607-611
    • Zhu, J.1    Zhang, M.Q.2
  • 13
    • 0025123264 scopus 로고
    • Morrow, and Jonathan R.Warner RebiI: A Yeast DNA-Binding Protein with Many Targets, Is Essential for Cell Growth and Bears Some Resemblance to the Oncogene myb
    • Qida. Ju, Bernice E.Morrow, and Jonathan R.Warner RebiI: A Yeast DNA-Binding Protein with Many Targets, Is Essential for Cell Growth and Bears Some Resemblance to the Oncogene myb. Molecular and Cellular Biology 1990, 10: 5226-5234
    • (1990) Molecular and Cellular Biology , vol.10 , pp. 5226-5234
    • Qida, J.1    Bernice, E.2
  • 14
    • 0030883032 scopus 로고    scopus 로고
    • DeVit, James A. Waddle, and Mark Johnston: Regulated Nuclear Translocation of the Migl Glucose Repressor
    • Michael J. DeVit, James A. Waddle, and Mark Johnston: Regulated Nuclear Translocation of the Migl Glucose Repressor: Molecular and Cellular Biology 1997, 8: 1603-1618
    • (1997) Molecular and Cellular Biology , vol.8 , pp. 1603-1618
    • Michael, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.