Revision and reclassification of three Plasmopara species based on morphological and molecular phylogenetic data

Mycological Research

Volumn 112, Issue 5, 2008, Pages 487-501

  Voglmayr, Hermann ^a   Constantinescu, Ovidiu ^b  

^a UNIVERSITY OF VIENNA   (Austria)

^b UPPSALA UNIVERSITY   (Sweden)

Author keywords

Chromista; Euphrasia; Molecular phylogeny; Ooomycetes

Indexed keywords

FUNGAL DNA; RIBOSOMAL SPACER DNA; RIBOSOME RNA;

DNA; FUNGUS; MORPHOLOGY; NEW GENUS; NEW SPECIES; PHYLOGENETICS; PHYLOGENY; TAXONOMY;

ARTICLE; CLASSIFICATION; CYTOLOGY; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PERONOSPORA; PHYLOGENY; PLANT DISEASE;

DNA, FUNGAL; DNA, RIBOSOMAL SPACER; MOLECULAR SEQUENCE DATA; PERONOSPORA; PHYLOGENY; PLANT DISEASES; RNA, RIBOSOMAL; SEQUENCE ANALYSIS, DNA;

BREMIA; CHROMISTA; EUPHRASIA; PLASMOPARA; PLASMOPARA DENSA; SCORZONERA;

EID: 42649142280     PISSN: 09537562     EISSN: 14698102     Source Type: Journal    
DOI: 10.1016/j.mycres.2007.10.009     Document Type: Article

References (27)

1. Bánhegyi J, Tóth S, Ubrizsy G, Vörös J, 1985. Magyarország mikroszkopikus gombáinak határozókönyve. 1. Kötet. Myxomycotina (Acrasiomycetes, Myxomycetes, Plasmodiophoromycetes) Eumycotina (Phycomycetes, Ascomycetes, Discomycetes). Akadémiai Kiadó, Budapest.
2. Choi Y.-J., Hong S.-B., and Shin H.-D. Extreme size and sequence variation in the ITS rDNA of Bremia lactucae. Mycopathologia 163 (2007) 91-95
3. Constantinescu O., and Negrean G. Check-list of Romanian Peronosporales. Mycotaxon 16 (1983) 537-556
4. Constantinescu O., Voglmayr H., Fatehi J., and Thines M. Plasmoverna gen. nov., and the taxonomy and nomenclature of Plasmopara (Chromista, Peronosporales). Taxon 54 (2005) 813-821
5. Cooke D.E.L., Drenth A., Duncan J.M., Wagels G., and Brasier C.M. A molecular phylogeny of Phytophthora and related oomycetes. Fungal Genetics and Biology 30 (2000) 17-32
6. Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32 (2004) 1792-1797
7. Gascuel O. BIONJ, an improved version of the NJ algorithm based on a simple model of sequence data. Molecular Biology and Evolution 14 (1997) 685-695
8. Göker M., Voglmayr H., Riethmüller A., and Oberwinkler F. How do obligate parasites evolve? A multi-gene phylogenetic analysis of downy mildews. Fungal Genetics and Biology 44 (2007) 105-122
9. Göker M., Voglmayr H., Riethmüller A., Weiß M., and Oberwinkler F. Taxonomic aspects of Peronosporaceae inferred from Bayesian molecular phylogenetics. Canadian Journal of Botany 81 (2003) 672-683
10. Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52 (2003) 696-704
11. Hasegawa M., Kishino H., and Yano T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22 (1985) 160-174
12. Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
13. Ito S, 1936. Mycological Flora of Japan. Vol. I, Phycomycetes. Yokendo, Tokyo.
14. Moncalvo J.M., Wang H.H., and Hseu R.S. Phylogenetic relationships in Ganoderma inferrred from the internal transcribed spacers and 25S ribosomal DNA sequences. Mycologia 87 (1995) 223-238
15. Novotel'nova N.S. Plasmopara halstedii (Farl.) Berl. et De Toni kak sbornyj vid (Obosnovanie k taksonomicheskomu podrazdeleniyu roda Plamopara na slozhnotsvetnykh). Botanicheskij Zhurnal 47 (1962) 970-981
16. Novotel'nova N.S. Obzor gribov Plasmopara, parazitiruyushchikh na slozhnotsvetnykh. Materialy vtorogo simpozyuma miko- i likhenoflore Pribaltijskikh respublik Vilnius (1963), Institut Botaniki Akademij Litovskij SSR, Vilnius 111-118
17. Novotel'nova NS, 1966. Lozhnaya muchnistaya rosa podsolnechnika. Taksonomiya i biologiya vozbuditelya, patogenez zabolevaniya. Nauka, Moskva-Leningrad.
18. Novotel'nova N.S. Evroaziatskie vidy roda Plasmopara Schroet. na slozhnotsvetnykh. Novosti Sistematiki Nizshikh Rastenij 6 (1970) 88-92
19. Nyárády E.I. Flora Republicii Populare Române vol. 10 (1965), Academia Republicii Populare Române, Bucureşti
20. Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
21. Riethmüller A., Voglmayr H., Göker M., Weiß M., and Oberwinkler F. Phylogenetic relationships of the downy mildews (Peronosporales) and related groups based on nuclear large subunit ribosomal DNA sequences. Mycologia 94 (2002) 834-849
22. Sǎvulescu T., and Sǎvulescu O. Studiul morfologic, biologic şi sistematic al genurilor Sclerospora, Basidiophora, Plasmopara şi Peronoplasmopara. Buletin Ştiinţific. Academia Republicii Populare Române. Secţiunea de Ştiinte biologice, agronomice, geologice şi geografice 3 (1951) 327-457
23. Swofford D.L. PAUP*: phylogenetic analysis using parsimony (*and other methods). version 4.0b10 (2002), Sinauer Associates, Sunderland, MA
24. Swofford D.L., Olsen G.J., Waddell P.J., and Hillis D.M. Phylogenetic inference. In: Hillis D.M., Moritz C., and Mable B.K. (Eds). Molecular Systematics (1996), Sinauer Associates, Sunderland, MA 407-514
25. Sydow H. Mycotheca germanica Fasc. XXXVII-XLI (no. 1801-2050). Annales Mycologici 21 (1923) 165-181
26. Voglmayr H., Fatehi J., and Constantinescu O. Revision of Plasmopara (Chromista, Peronosporales) parasitic on Geraniaceae. Mycological Research 110 (2006) 633-645
27. Voglmayr H., Riethmüller A., Göker M., Weiß M., and Oberwinkler F. Phylogenetic relationships of Plasmopara, Bremia and other genera of downy mildews with pyriform haustoria based on Bayesian analysis of partial LSU rDNA sequence data. Mycological Research 108 (2004) 1011-1024