-
1
-
-
24044506976
-
Genome-wide survey of prokaryotic O-protein phosphatases
-
Bhaduri, A. Sowdhamini, R. (2005) Genome-wide survey of prokaryotic O-protein phosphatases. J. Mol. Biol. 352, 736 752.
-
(2005)
J. Mol. Biol.
, vol.352
, pp. 736-752
-
-
Bhaduri, A.1
Sowdhamini, R.2
-
2
-
-
33646843250
-
Cloning and expression of maize-leaf pyruvate, Pi dikinase regulatory protein gene
-
Burnell, J.N. Chastain, C.J. (2006) Cloning and expression of maize-leaf pyruvate, Pi dikinase regulatory protein gene. Biochem. Biophys. Res. Commun. 345, 675 680.
-
(2006)
Biochem. Biophys. Res. Commun.
, vol.345
, pp. 675-680
-
-
Burnell, J.N.1
Chastain, C.J.2
-
3
-
-
0021114085
-
Dark/light regulation of pyruvate,Pi dikinase in C4 plants: Evidence that the same protein catalyses activation and inactivation
-
Burnell, J.N. Hatch, M.D. (1983) Dark/light regulation of pyruvate,Pi dikinase in C4 plants: evidence that the same protein catalyses activation and inactivation. Biochem. Biophys. Res. Commun. 111, 288 293.
-
(1983)
Biochem. Biophys. Res. Commun.
, vol.111
, pp. 288-293
-
-
Burnell, J.N.1
Hatch, M.D.2
-
4
-
-
0022034679
-
Regulation of C4 photosynthesis: Purification and properties of the protein catalyzing ADP-mediated inactivation and Pi-mediated activation of pyruvate, Pi dikinase
-
Burnell, J.N. Hatch, M.D. (1985) Regulation of C4 photosynthesis: purification and properties of the protein catalyzing ADP-mediated inactivation and Pi-mediated activation of pyruvate, Pi dikinase. Arch. Biochem. Biophys. 237, 490 503.
-
(1985)
Arch. Biochem. Biophys.
, vol.237
, pp. 490-503
-
-
Burnell, J.N.1
Hatch, M.D.2
-
5
-
-
0242584824
-
Regulation of pyruvate,orthophosphate dikinase by ADP/Pi-dependent reversible phosphorylation in C3 and C4 plants
-
Chastain, C.J. Chollet, R. (2003) Regulation of pyruvate,orthophosphate dikinase by ADP/Pi-dependent reversible phosphorylation in C3 and C4 plants. Plant Physiol. Biochem. 41, 523 532.
-
(2003)
Plant Physiol. Biochem.
, vol.41
, pp. 523-532
-
-
Chastain, C.J.1
Chollet, R.2
-
6
-
-
0030871996
-
Site-directed mutagenesis of maize recombinant C4-pyruvate, orthophosphate dikinase at the phosphorylatable target threonine residue
-
Chastain, C.J., Lee, M.E., Moorman, M.A., Shameekumar, P. Chollet, R. (1997) Site-directed mutagenesis of maize recombinant C4-pyruvate, orthophosphate dikinase at the phosphorylatable target threonine residue. FEBS Lett. 413, 169 173.
-
(1997)
FEBS Lett.
, vol.413
, pp. 169-173
-
-
Chastain, C.J.1
Lee, M.E.2
Moorman, M.A.3
Shameekumar, P.4
Chollet, R.5
-
7
-
-
0034163369
-
4-pyruvate,orthophosphate dikinase phosphorylation by its bifunctional regulatory protein using selective substitutions of the regulatory Thr-456 and catalytic His-458 residues
-
4-pyruvate,orthophosphate dikinase phosphorylation by its bifunctional regulatory protein using selective substitutions of the regulatory Thr-456 and catalytic His-458 residues. Arch. Biochem. Biophys. 375, 165 170.
-
(2000)
Arch. Biochem. Biophys.
, vol.375
, pp. 165-170
-
-
Chastain, C.J.1
Botschner, M.2
Harrington, G.E.3
Thompson, B.J.4
Mills, S.E.5
Sarath, G.6
Chollet, R.7
-
9
-
-
33747832401
-
Posttranslational regulation of pyruvate, orthophosphate dikinase in developing rice (Oryza sativa) seeds
-
Chastain, C.J., Heck, J.W., Colquhoun, T.A., Voge, D.G. Gu, X.Y. (2006) Posttranslational regulation of pyruvate, orthophosphate dikinase in developing rice (Oryza sativa) seeds. Planta, 224, 924 934.
-
(2006)
Planta
, vol.224
, pp. 924-934
-
-
Chastain, C.J.1
Heck, J.W.2
Colquhoun, T.A.3
Voge, D.G.4
Gu, X.Y.5
-
10
-
-
0008868127
-
Carbohydrate metabolism
-
In. Buchanan, B.B., Gruissem, W. Jones, R.L., eds). Rockville: American Society of Plant Physiologists, pp.
-
Dennis, D.T. Blakeley, S.D. (2000) Carbohydrate metabolism. In Biochemistry & Molecular Biology of Plants (Buchanan, B.B., Gruissem, W. Jones, R.L., eds). Rockville : American Society of Plant Physiologists, pp. 630 675.
-
(2000)
Biochemistry & Molecular Biology of Plants
, pp. 630-675
-
-
Dennis, D.T.1
Blakeley, S.D.2
-
11
-
-
0032935861
-
ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
-
Emanuelsson, O., Nielsen, H. von Heijne, G. (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci. 8, 978 984.
-
(1999)
Protein Sci.
, vol.8
, pp. 978-984
-
-
Emanuelsson, O.1
Nielsen, H.2
Von Heijne, G.3
-
12
-
-
0029901637
-
Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods
-
Felsenstein, J. (1996) Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Meth. Enzymol. 266, 418 427.
-
(1996)
Meth. Enzymol.
, vol.266
, pp. 418-427
-
-
Felsenstein, J.1
-
13
-
-
1042279117
-
In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: New proteins, new functions, and a plastid proteome database
-
Friso, G., Giacomelli, L., Ytterberg, A.J., Peltier, J-B., Rudella, A., Sun, Q. van Wijk, K.J. (2004) In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Plant Cell, 16, 478 499.
-
(2004)
Plant Cell
, vol.16
, pp. 478-499
-
-
Friso, G.1
Giacomelli, L.2
Ytterberg, A.J.3
Peltier, J.-B.4
Rudella, A.5
Sun, Q.6
Van Wijk, K.J.7
-
14
-
-
0030667053
-
Genetic manipulation of key photosynthetic enzymes in the C4 plant Flaveria bidentis
-
Furbank, R.T., Chitty, J.A., Jenkins, C.L.D., Taylor, W.C., Trevanion, S.J., Caemmerer, S.V. Ashton, A.R. (1997) Genetic manipulation of key photosynthetic enzymes in the C4 plant Flaveria bidentis. Aust. J. Plant Physiol. 24, 477 485.
-
(1997)
Aust. J. Plant Physiol.
, vol.24
, pp. 477-485
-
-
Furbank, R.T.1
Chitty, J.A.2
Jenkins, C.L.D.3
Taylor, W.C.4
Trevanion, S.J.5
Caemmerer, S.V.6
Ashton, A.R.7
-
15
-
-
0029020282
-
The eukaryotic protein kinase superfamily: Kinase (catalytic) domain structure and classification
-
Hanks, S.K. Hunter, T. (1995) The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J. 9, 576 596.
-
(1995)
FASEB J.
, vol.9
, pp. 576-596
-
-
Hanks, S.K.1
Hunter, T.2
-
16
-
-
0033499326
-
Plant protein serine/threonine kinases: Classification and functions
-
Hardie, D.G. (1999) Plant protein serine/threonine kinases: classification and functions. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50, 97 131.
-
(1999)
Annu. Rev. Plant Physiol. Plant Mol. Biol.
, vol.50
, pp. 97-131
-
-
Hardie, D.G.1
-
17
-
-
0033231543
-
Phosphoenolpyruvate carboxylase kinase is a novel protein kinase regulated at the level of expression
-
Hartwell, J., Gill, A., Nimmo, G.A., Wilkins, M.B., Jenkins, G.I. Nimmo, H.G. (1999) Phosphoenolpyruvate carboxylase kinase is a novel protein kinase regulated at the level of expression. Plant J. 20, 333 342.
-
(1999)
Plant J.
, vol.20
, pp. 333-342
-
-
Hartwell, J.1
Gill, A.2
Nimmo, G.A.3
Wilkins, M.B.4
Jenkins, G.I.5
Nimmo, H.G.6
-
18
-
-
0032441115
-
Transient expression of green fluorescent protein in various plastid types following microprojectile bombardment
-
Hibberd, J.M., Linley, P.J., Khan, M.S. Gray, J.C. (1998) Transient expression of green fluorescent protein in various plastid types following microprojectile bombardment. Plant J. 16, 627 632.
-
(1998)
Plant J.
, vol.16
, pp. 627-632
-
-
Hibberd, J.M.1
Linley, P.J.2
Khan, M.S.3
Gray, J.C.4
-
19
-
-
33644876022
-
The PROSITE database
-
Hulo, N., Bairoch, A., Bulliard, V., Cerutti, L., De Castro, E., Langendijk-Genevaux, P.S., Pagni, M. Sigrist, C.J.A. (2006) The PROSITE database. Nucleic Acids Res. 34, D227 D230.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Hulo, N.1
Bairoch, A.2
Bulliard, V.3
Cerutti, L.4
De Castro, E.5
Langendijk-Genevaux, P.S.6
Pagni, M.7
Sigrist, C.J.A.8
-
20
-
-
34250643895
-
Transcript profiling of the anoxic rice coleoptile
-
Lasanthi-Kudahettige, R., Magneschi, L., Loreti, E., Gonzali, S., Licausi, F., Novi, G., Beretta, O., Vitulli, F., Alpi, A. Perata, P. (2007) Transcript profiling of the anoxic rice coleoptile. Plant Physiol. 144, 218 231.
-
(2007)
Plant Physiol.
, vol.144
, pp. 218-231
-
-
Lasanthi-Kudahettige, R.1
Magneschi, L.2
Loreti, E.3
Gonzali, S.4
Licausi, F.5
Novi, G.6
Beretta, O.7
Vitulli, F.8
Alpi, A.9
Perata, P.10
-
21
-
-
0031722706
-
Novel families of putative protein kinases in bacteria and archaea: Evolution of the 'eukaryotic' protein kinase superfamily
-
Leonard, C.J., Aravind, L. Koonin, E.V. (1998) Novel families of putative protein kinases in bacteria and archaea: evolution of the 'eukaryotic' protein kinase superfamily. Genome Res. 8, 1038 1047.
-
(1998)
Genome Res.
, vol.8
, pp. 1038-1047
-
-
Leonard, C.J.1
Aravind, L.2
Koonin, E.V.3
-
22
-
-
33645960112
-
Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics
-
Majeran, W., Cai, Y. van Wijk, K.J. (2005) Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics. Plant Cell, 17, 3111 3140.
-
(2005)
Plant Cell
, vol.17
, pp. 3111-3140
-
-
Majeran, W.1
Cai, Y.2
Van Wijk, K.J.3
-
23
-
-
34250613014
-
Developmental analysis of maize endosperm proteome suggests a pivotal role for pyruvate orthophosphate dikinase
-
Méchin, V., Thévenot, C., Le Guilloux, M., Prioul, J-L. Damerval, C. (2007) Developmental analysis of maize endosperm proteome suggests a pivotal role for pyruvate orthophosphate dikinase. Plant Physiol. 143, 1203 1219.
-
(2007)
Plant Physiol.
, vol.143
, pp. 1203-1219
-
-
Méchin, V.1
Thévenot, C.2
Le Guilloux, M.3
Prioul, J.-L.4
Damerval, C.5
-
24
-
-
33748997342
-
The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins
-
Parsley, K. Hibberd, J.M. (2006) The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins. Plant Mol. Biol. 62, 339 349.
-
(2006)
Plant Mol. Biol.
, vol.62
, pp. 339-349
-
-
Parsley, K.1
Hibberd, J.M.2
-
25
-
-
0036007922
-
Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction
-
Peltier, J-B., Emanuelsson, O., Kalume, D.E. et al. (2002) Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. Plant Cell, 14, 211 236.
-
(2002)
Plant Cell
, vol.14
, pp. 211-236
-
-
Peltier, J.-B.1
Emanuelsson, O.2
Kalume, D.E.3
-
26
-
-
33645536135
-
The functional organization and control of plant respiration
-
Plaxton, W.C. Podesta, F.E. (2006) The functional organization and control of plant respiration. Crit. Rev. Plant Sci. 25, 159 198.
-
(2006)
Crit. Rev. Plant Sci.
, vol.25
, pp. 159-198
-
-
Plaxton, W.C.1
Podesta, F.E.2
-
27
-
-
0023656225
-
Chemical modification of the bifunctional regulatory protein of maize leaf pyruvate, orthophosphate dikinase: Evidence for two distinct active sites
-
Roeske, C.A. Chollet, R. (1987) Chemical modification of the bifunctional regulatory protein of maize leaf pyruvate, orthophosphate dikinase: evidence for two distinct active sites. J. Biol. Chem. 262, 12575 12582.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 12575-12582
-
-
Roeske, C.A.1
Chollet, R.2
-
28
-
-
41849110846
-
Structural evolution of the protein kinase-like superfamily
-
Scheeff, E.D. Bourne, P.E. (2005) Structural evolution of the protein kinase-like superfamily. PLoS Comput. Biol. 5, 359 381.
-
(2005)
PLoS Comput. Biol.
, vol.5
, pp. 359-381
-
-
Scheeff, E.D.1
Bourne, P.E.2
-
29
-
-
2942589051
-
Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences
-
Small, I., Peeters, N., Legeai, F. Lurin, C. (2004) Predotar: a tool for rapidly screening proteomes for N-terminal targeting sequences. Proteomics, 4, 1581 1590.
-
(2004)
Proteomics
, vol.4
, pp. 1581-1590
-
-
Small, I.1
Peeters, N.2
Legeai, F.3
Lurin, C.4
-
30
-
-
0028227552
-
Partial purification and characterization of maize-leaf pyruvate, orthophosphate dikinase regulatory protein: A low-abundance, mesophyll-chloroplast stromal protein
-
Smith, C.M., Duff, S.M.G. Chollet, R. (1994a) Partial purification and characterization of maize-leaf pyruvate, orthophosphate dikinase regulatory protein: a low-abundance, mesophyll-chloroplast stromal protein. Arch. Biochem. Biophys. 308, 200 206.
-
(1994)
Arch. Biochem. Biophys.
, vol.308
, pp. 200-206
-
-
Smith, C.M.1
Duff, S.M.G.2
Chollet, R.3
-
31
-
-
0027951445
-
A simple, single-tube radioisotopic assay for the phosphorylation/ inactivation activity of the pyruvate,orthophosphate dikinase regulatory protein
-
Smith, C.M., Sarath, G. Chollet, R. (1994b) A simple, single-tube radioisotopic assay for the phosphorylation/inactivation activity of the pyruvate,orthophosphate dikinase regulatory protein. Photosynth. Res. 40, 295 301.
-
(1994)
Photosynth. Res.
, vol.40
, pp. 295-301
-
-
Smith, C.M.1
Sarath, G.2
Chollet, R.3
-
32
-
-
33845881426
-
Evolution of the metazoan protein phosphatase 2C superfamily
-
Stern, A., Privman, E., Rasis, M., Lavi, S. Pupko, T. (2007) Evolution of the metazoan protein phosphatase 2C superfamily. J. Mol. Evol. 64, 61 70.
-
(2007)
J. Mol. Evol.
, vol.64
, pp. 61-70
-
-
Stern, A.1
Privman, E.2
Rasis, M.3
Lavi, S.4
Pupko, T.5
-
33
-
-
0031574072
-
The Clustal-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. Higgins, D.G. (1997) The Clustal-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876 4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
34
-
-
33644878388
-
PANDIT: An evolution-centric database of protein and associated nucleotide domains with inferred trees
-
Whelan, S., de Bakker, P.I.W., Quevillon, E., Rodriguez, N. Goldman, N. (2006) PANDIT: an evolution-centric database of protein and associated nucleotide domains with inferred trees. Nucleic Acids Res. 34, D327 D331.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Whelan, S.1
De Bakker, P.I.W.2
Quevillon, E.3
Rodriguez, N.4
Goldman, N.5
-
35
-
-
0038751865
-
Identification and expression of a soybean nodule-enhanced PEP-carboxylase kinase gene (NE-PpcK) that shows striking up-/down-regulation in vivo
-
Xu, W., Zhou, Y. Chollet, R. (2003) Identification and expression of a soybean nodule-enhanced PEP-carboxylase kinase gene (NE-PpcK) that shows striking up-/down-regulation in vivo. Plant J. 34, 441 452.
-
(2003)
Plant J.
, vol.34
, pp. 441-452
-
-
Xu, W.1
Zhou, Y.2
Chollet, R.3
-
36
-
-
33847157484
-
The PEP-carboxylase kinase gene family in Glycine max (GmPpcK1-4): An in-depth molecular analysis with nodulated, non-transgenic and transgenic plants
-
Xu, W., Sato, S.J., Clemente, T.E. Chollet, R. (2007) The PEP-carboxylase kinase gene family in Glycine max (GmPpcK1-4): an in-depth molecular analysis with nodulated, non-transgenic and transgenic plants. Plant J. 49, 910 923.
-
(2007)
Plant J.
, vol.49
, pp. 910-923
-
-
Xu, W.1
Sato, S.J.2
Clemente, T.E.3
Chollet, R.4
-
37
-
-
13444264729
-
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox
-
Accession numbers: AtRP1, ; AtRP2, ; Glycine max RP (GmRP1) (); Sorghum bicolor RP (SbRP1) ().
-
Zimmermann, P., Hirsch-Hoffmann, M., Hennig, L. Gruissem, W. (2004) GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol. 136, 2621 2632.
-
(2004)
Plant Physiol.
, vol.136
, pp. 2621-2632
-
-
Zimmermann, P.1
Hirsch-Hoffmann, M.2
Hennig, L.3
Gruissem, W.4
|