-
1
-
-
33750584869
-
Rejuvenating rice proteomics: Facts, challenges, and visions
-
Agrawal, G. K., N. S. Jwa, Y. Iwahashi, M. Yonekura, H. Iwahashi, and R. Rakwal. 2006. Rejuvenating rice proteomics: facts, challenges, and visions. Proteomics 6:5549-5576.
-
(2006)
Proteomics
, vol.6
, pp. 5549-5576
-
-
Agrawal, G.K.1
Jwa, N.S.2
Iwahashi, Y.3
Yonekura, M.4
Iwahashi, H.5
Rakwal, R.6
-
2
-
-
33644848361
-
Rice proteomics: A cornerstone for cereal food crop proteomes
-
Agrawal, G. K. and R. Rakwal. 2006. Rice proteomics: a cornerstone for cereal food crop proteomes. Mass Spectrom. Rev. 25:1-53.
-
(2006)
Mass Spectrom. Rev
, vol.25
, pp. 1-53
-
-
Agrawal, G.K.1
Rakwal, R.2
-
3
-
-
33646263838
-
Proteome analysis of cold stress response in Arabidopsis thaliana using DIGE-technology
-
Amme, S., A. Matros, B. Schlesier, and H. P. Mock. 2006. Proteome analysis of cold stress response in Arabidopsis thaliana using DIGE-technology. J. Exp. Bot. 57:1537-1546.
-
(2006)
J. Exp. Bot
, vol.57
, pp. 1537-1546
-
-
Amme, S.1
Matros, A.2
Schlesier, B.3
Mock, H.P.4
-
4
-
-
33847367224
-
Proteome analysis of chloroplast mRNA processing and degradation
-
Baginsky, S., J. Grossmann, and W. Gruissem. 2007. Proteome analysis of chloroplast mRNA processing and degradation. J. Proteome Res. 6:809-820.
-
(2007)
J. Proteome Res
, vol.6
, pp. 809-820
-
-
Baginsky, S.1
Grossmann, J.2
Gruissem, W.3
-
5
-
-
34547144255
-
Enhanced separation of membranes during free flow zonal electrophoresis in plants
-
Barkla, B. J., R. Vera-Estrella, and O. Pantoja. 2007. Enhanced separation of membranes during free flow zonal electrophoresis in plants. Anal. Chem. 79:5181-5187.
-
(2007)
Anal. Chem
, vol.79
, pp. 5181-5187
-
-
Barkla, B.J.1
Vera-Estrella, R.2
Pantoja, O.3
-
6
-
-
0033915670
-
Background-free, high sensitivity staining of proteins in one- and two-dimensional sodium dodecyl sulfate-polyacrylamide gels using a luminescent ruthenium complex
-
Berggren, K., E. Chernokalskaya, T. H. Steinberg, C. Kemper, M. F. Lopez, Z. Diwu, R. P. Haugland, and W. F. Patton. 2000. Background-free, high sensitivity staining of proteins in one- and two-dimensional sodium dodecyl sulfate-polyacrylamide gels using a luminescent ruthenium complex. Electrophoresis 21:2509-2521.
-
(2000)
Electrophoresis
, vol.21
, pp. 2509-2521
-
-
Berggren, K.1
Chernokalskaya, E.2
Steinberg, T.H.3
Kemper, C.4
Lopez, M.F.5
Diwu, Z.6
Haugland, R.P.7
Patton, W.F.8
-
7
-
-
33750601062
-
The pitfalls of proteomics experiments without the correct use of bioinformatics tools
-
Biron, D. G., C. Brun, T. Lefevre, C. Lebarbenchon, H. D. Loxdale, F. Chevenet, J. P. Brizard, and F. Thomas. 2006. The pitfalls of proteomics experiments without the correct use of bioinformatics tools. Proteomics 6:5577-5596.
-
(2006)
Proteomics
, vol.6
, pp. 5577-5596
-
-
Biron, D.G.1
Brun, C.2
Lefevre, T.3
Lebarbenchon, C.4
Loxdale, H.D.5
Chevenet, F.6
Brizard, J.P.7
Thomas, F.8
-
8
-
-
0020185480
-
Isoelectric focusing in immobilized pH gradients: Principle, methodology and some applications
-
Bjellqvist, B., K. Ek, P. G. Righetti, E. Gianazza, A. Görg, R. Westermeier, and W. Postel. 1982. Isoelectric focusing in immobilized pH gradients: principle, methodology and some applications. J. Biochem. Biophys. Methods 6:317-339.
-
(1982)
J. Biochem. Biophys. Methods
, vol.6
, pp. 317-339
-
-
Bjellqvist, B.1
Ek, K.2
Righetti, P.G.3
Gianazza, E.4
Görg, A.5
Westermeier, R.6
Postel, W.7
-
9
-
-
34249725560
-
A DIGE analysis of developing poplar leaves subjected to ozone reveals major changes in carbon metabolism
-
Bohler, S., M. Bagard, M. Oufir, S. Planchon, L. Hoffmann, Y. Jolivet, J. F. Hausman, P. Dizengremel, and J. Renaut. 2007. A DIGE analysis of developing poplar leaves subjected to ozone reveals major changes in carbon metabolism. Proteomics 7:1584-1599.
-
(2007)
Proteomics
, vol.7
, pp. 1584-1599
-
-
Bohler, S.1
Bagard, M.2
Oufir, M.3
Planchon, S.4
Hoffmann, L.5
Jolivet, Y.6
Hausman, J.F.7
Dizengremel, P.8
Renaut, J.9
-
10
-
-
39049186110
-
Two-dimensional nanoflow liquid chromatography-tandem mass spectrometry of proteins extracted from rice leaves and roots
-
Breci, L. and P. A. Haynes. 2007. Two-dimensional nanoflow liquid chromatography-tandem mass spectrometry of proteins extracted from rice leaves and roots. Methods Mol. Biol. 355:249-266.
-
(2007)
Methods Mol. Biol
, vol.355
, pp. 249-266
-
-
Breci, L.1
Haynes, P.A.2
-
11
-
-
22044456721
-
Preparation of protein extracts from recalcitrant plant tissues: An evaluation of different methods for two-dimensional gel electrophoresis analysis
-
Carpentier, S. C., E. Witters, K. Laukens, P. Deckers, R. Swennen, and B. Panis. 2005. Preparation of protein extracts from recalcitrant plant tissues: an evaluation of different methods for two-dimensional gel electrophoresis analysis. Proteomics 5:2497-2507.
-
(2005)
Proteomics
, vol.5
, pp. 2497-2507
-
-
Carpentier, S.C.1
Witters, E.2
Laukens, K.3
Deckers, P.4
Swennen, R.5
Panis, B.6
-
12
-
-
15744385479
-
The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins
-
Carter, C., S. Pan, J. Zouhar, E. L. Avila, T. Girke, and N. V. Raikhel. 2004. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16:3285-3303.
-
(2004)
Plant Cell
, vol.16
, pp. 3285-3303
-
-
Carter, C.1
Pan, S.2
Zouhar, J.3
Avila, E.L.4
Girke, T.5
Raikhel, N.V.6
-
13
-
-
27144505199
-
Proteomic analysis of grapevine (Vitis vinifera L.) tissues subjected to herbicide stress
-
Castro, A. J., C. Carapito, N. Zorn, C. Magne, E. Leize, A. Van Dorsselaer, and C. Clement. 2005. Proteomic analysis of grapevine (Vitis vinifera L.) tissues subjected to herbicide stress. J. Exp. Bot. 56:2783-2795.
-
(2005)
J. Exp. Bot
, vol.56
, pp. 2783-2795
-
-
Castro, A.J.1
Carapito, C.2
Zorn, N.3
Magne, C.4
Leize, E.5
Van Dorsselaer, A.6
Clement, C.7
-
14
-
-
33747348636
-
Selective disruption of wheat secondary metabolism by herbicide safeners
-
Cummins, I., M. Brazier-Hicks, M. Stobiecki, R. Franski, and R. Edwards. 2006. Selective disruption of wheat secondary metabolism by herbicide safeners. Phytochemistry 67:1722-1730.
-
(2006)
Phytochemistry
, vol.67
, pp. 1722-1730
-
-
Cummins, I.1
Brazier-Hicks, M.2
Stobiecki, M.3
Franski, R.4
Edwards, R.5
-
15
-
-
0037163126
-
Functional divergence in the glutathione transferase superfamily in plants. Identification of two classes with putative functions in redox homeostasis in Arabidopsis thaliana
-
Dixon, D. P., B. G. Davis, and R. Edwards. 2002. Functional divergence in the glutathione transferase superfamily in plants. Identification of two classes with putative functions in redox homeostasis in Arabidopsis thaliana. J. Biol. Chem. 277:30859-30869.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 30859-30869
-
-
Dixon, D.P.1
Davis, B.G.2
Edwards, R.3
-
16
-
-
0038606300
-
Forced evolution of a herbicide detoxifying glutathione transferase
-
Dixon, D. P., A. G. McEwen, A. J. Lapthorn, and R. Edwards. 2003. Forced evolution of a herbicide detoxifying glutathione transferase. J. Biol. Chem. 278:23930-23935.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 23930-23935
-
-
Dixon, D.P.1
McEwen, A.G.2
Lapthorn, A.J.3
Edwards, R.4
-
17
-
-
3042660176
-
The use of isotope-coded affinity tags (ICAT) to study organelle proteomes in Arabidopsis thaliana
-
Dunkley, T. P., P. Dupree, R. B. Watson, and K. S. Lilley. 2004a. The use of isotope-coded affinity tags (ICAT) to study organelle proteomes in Arabidopsis thaliana. Biochem. Soc. Trans. 32:520-523.
-
(2004)
Biochem. Soc. Trans
, vol.32
, pp. 520-523
-
-
Dunkley, T.P.1
Dupree, P.2
Watson, R.B.3
Lilley, K.S.4
-
18
-
-
10944246119
-
Localization of organelle proteins by isotope tagging (LOPIT)
-
Dunkley, T. P., R. Watson, J. L. Griffin, P. Dupree, and K. S. Lilley. 2004b. Localization of organelle proteins by isotope tagging (LOPIT). Mol. Cell. Proteomics 3:1128-1134.
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 1128-1134
-
-
Dunkley, T.P.1
Watson, R.2
Griffin, J.L.3
Dupree, P.4
Lilley, K.S.5
-
19
-
-
0000369624
-
A method for the determination of the amino acid sequence of peptides
-
Edman, P. 1949. A method for the determination of the amino acid sequence of peptides. Arch. Biochem. Biophys. 22:475-483.
-
(1949)
Arch. Biochem. Biophys
, vol.22
, pp. 475-483
-
-
Edman, P.1
-
20
-
-
0000857494
-
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
-
Eng, J. K., A. L. McCormack, and J. R Yates. 1994. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5:976-989.
-
(1994)
J. Am. Soc. Mass Spectrom
, vol.5
, pp. 976-989
-
-
Eng, J.K.1
McCormack, A.L.2
Yates, J.R.3
-
21
-
-
39049176896
-
Isolation and subfractionation of plant mitochondria for proteomic analysis
-
Eubel, H., J. L. Heazlewood, and A. H. Millar. 2007. Isolation and subfractionation of plant mitochondria for proteomic analysis. Methods Mol. Biol. 355:49-62.
-
(2007)
Methods Mol. Biol
, vol.355
, pp. 49-62
-
-
Eubel, H.1
Heazlewood, J.L.2
Millar, A.H.3
-
22
-
-
0041733229
-
Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis
-
Froehlich, J. E., C. G. Wilkerson, W. K. Ray, R. S. McAndrew, K. W. Osteryoung, D. A. Gage, and B. S. Phinney. 2003. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J. Proteome Res. 2:413-425.
-
(2003)
J. Proteome Res
, vol.2
, pp. 413-425
-
-
Froehlich, J.E.1
Wilkerson, C.G.2
Ray, W.K.3
McAndrew, R.S.4
Osteryoung, K.W.5
Gage, D.A.6
Phinney, B.S.7
-
23
-
-
0037265724
-
Extraction of proteins from plant tissues for two-dimensional electrophoresis analysis
-
Giavalisco, P., E. Nordhoff, H. Lehrach, and J. Klose. 2003. Extraction of proteins from plant tissues for two-dimensional electrophoresis analysis. Electrophoresis 24:207-216.
-
(2003)
Electrophoresis
, vol.24
, pp. 207-216
-
-
Giavalisco, P.1
Nordhoff, E.2
Lehrach, H.3
Klose, J.4
-
24
-
-
33644896212
-
The roles of mass spectrometry in plant systems biology
-
Glinski, M. and W. Weckwerth. 2006. The roles of mass spectrometry in plant systems biology. Mass Spectrom. Rev. 25:173-214.
-
(2006)
Mass Spectrom. Rev
, vol.25
, pp. 173-214
-
-
Glinski, M.1
Weckwerth, W.2
-
25
-
-
0000116525
-
Two-dimensional electrophoresis
-
Görg, A. 1991. Two-dimensional electrophoresis. Nature 349:545-546.
-
(1991)
Nature
, vol.349
, pp. 545-546
-
-
Görg, A.1
-
26
-
-
0034095972
-
The current state of two-dimensional electrophoresis with immobilized pH gradients
-
Görg, A., C. Obermaier, G. Boguth, A. Harder, B. Scheibe, R. Wildgruber, and W. Weiss. 2000. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 21:1037-1053.
-
(2000)
Electrophoresis
, vol.21
, pp. 1037-1053
-
-
Görg, A.1
Obermaier, C.2
Boguth, G.3
Harder, A.4
Scheibe, B.5
Wildgruber, R.6
Weiss, W.7
-
27
-
-
0023768475
-
The current state of two-dimensional electrophoresis with immobilized pH gradients
-
Görg, A., W. Postel, and S. Gunther. 1988. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 9:531-546.
-
(1988)
Electrophoresis
, vol.9
, pp. 531-546
-
-
Görg, A.1
Postel, W.2
Gunther, S.3
-
28
-
-
10644230916
-
Current two-dimensional electrophoresis technology for proteomics
-
Görg, A., W. Weiss, and M. J. Dunn. 2004. Current two-dimensional electrophoresis technology for proteomics. Proteomics 4:3665-3685.
-
(2004)
Proteomics
, vol.4
, pp. 3665-3685
-
-
Görg, A.1
Weiss, W.2
Dunn, M.J.3
-
30
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
Gygi, S. P., B. Rist, S. A. Gerber, F. Turecek, M. H. Gelb, and R. Aebersold. 1999. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17:994-999.
-
(1999)
Nat. Biotechnol
, vol.17
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
31
-
-
34248198410
-
Assessing detection methods for gel-based proteomic analyses
-
Harris, L. R., M. A. Churchward, R. H. Butt, and J. R. Coorssen. 2007. Assessing detection methods for gel-based proteomic analyses. J. Proteome Res. 6:1418-1425.
-
(2007)
J. Proteome Res
, vol.6
, pp. 1418-1425
-
-
Harris, L.R.1
Churchward, M.A.2
Butt, R.H.3
Coorssen, J.R.4
-
32
-
-
33747836005
-
Phosphoproteomics toolbox: Computational biology, protein chemistry and mass spectrometry
-
Hjerrild, M. and S. Gammeltoft. 2006. Phosphoproteomics toolbox: computational biology, protein chemistry and mass spectrometry. FEBS Lett. 580:4764-4770.
-
(2006)
FEBS Lett
, vol.580
, pp. 4764-4770
-
-
Hjerrild, M.1
Gammeltoft, S.2
-
33
-
-
33748323084
-
Proteomic analysis of root meristems and the effects of acetohydroxyacid synthase-inhibiting herbicides in the root of Medicago truncatula
-
Holmes, P., R. Farquharson, P. J. Hall, and B. G. Rolfe. 2006. Proteomic analysis of root meristems and the effects of acetohydroxyacid synthase-inhibiting herbicides in the root of Medicago truncatula. J. Proteome Res. 5:2309-2316.
-
(2006)
J. Proteome Res
, vol.5
, pp. 2309-2316
-
-
Holmes, P.1
Farquharson, R.2
Hall, P.J.3
Rolfe, B.G.4
-
34
-
-
0037345710
-
Wheat proteomics: Relationship between fine chromosome deletion and protein expression
-
Islam, N., H. Tsujimoto, and H. Hirano. 2003. Wheat proteomics: relationship between fine chromosome deletion and protein expression. Proteomics 3:307-316.
-
(2003)
Proteomics
, vol.3
, pp. 307-316
-
-
Islam, N.1
Tsujimoto, H.2
Hirano, H.3
-
35
-
-
33845386374
-
Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphare interactions within the matrix
-
Ito, J., J. L. Heazlewood, and A. H. Millar. 2006. Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphare interactions within the matrix. J. Proteome Res. 5:3459-3469.
-
(2006)
J. Proteome Res
, vol.5
, pp. 3459-3469
-
-
Ito, J.1
Heazlewood, J.L.2
Millar, A.H.3
-
36
-
-
34147149761
-
A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture
-
Jaquinod, M., F. Villiers, S. Kieffer-Jaquinod, V. Hugouvieux, C. Bruley, J. Garin, and J. Bourguignon. 2007. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol. Cell. Proteomics 6:394-412.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 394-412
-
-
Jaquinod, M.1
Villiers, F.2
Kieffer-Jaquinod, S.3
Hugouvieux, V.4
Bruley, C.5
Garin, J.6
Bourguignon, J.7
-
37
-
-
33750318231
-
Evaluation of auxin-responsive genes in soybean for detection of off-target plant growth regulator herbicides
-
Kelley, K. B., Q. Zhang, K. N. Lambert, and D. E. Riechers. 2006. Evaluation of auxin-responsive genes in soybean for detection of off-target plant growth regulator herbicides. Weed Sci. 54:220-229.
-
(2006)
Weed Sci
, vol.54
, pp. 220-229
-
-
Kelley, K.B.1
Zhang, Q.2
Lambert, K.N.3
Riechers, D.E.4
-
38
-
-
0034931862
-
Two-dimensional electrophoretic analysis of rice proteins by polyethylene glycol fractionation for protein arrays
-
Kim, S. T., K. S. Cho, Y. S. Jang, and K. Y. Kang. 2001. Two-dimensional electrophoretic analysis of rice proteins by polyethylene glycol fractionation for protein arrays. Electrophoresis 22:2103-2109.
-
(2001)
Electrophoresis
, vol.22
, pp. 2103-2109
-
-
Kim, S.T.1
Cho, K.S.2
Jang, Y.S.3
Kang, K.Y.4
-
39
-
-
33750094060
-
Update and challenges on proteomics in rice
-
Komatsu, S. and H. Yano. 2006. Update and challenges on proteomics in rice. Proteomics 6:4057-4068.
-
(2006)
Proteomics
, vol.6
, pp. 4057-4068
-
-
Komatsu, S.1
Yano, H.2
-
40
-
-
32344434974
-
Comparison of two proteomics techniques used to identify proteins regulated by gibberellin in rice
-
Komatsu, S., X. Zang, and N. Tanaka. 2006. Comparison of two proteomics techniques used to identify proteins regulated by gibberellin in rice. J. Proteome Res. 5:270-276.
-
(2006)
J. Proteome Res
, vol.5
, pp. 270-276
-
-
Komatsu, S.1
Zang, X.2
Tanaka, N.3
-
41
-
-
33646227179
-
Methods of quantitative proteomics and their application to plant organelle characterization
-
Lilley, K. S. and P. Dupree. 2006. Methods of quantitative proteomics and their application to plant organelle characterization. J. Exp. Bot. 57:1493-1499.
-
(2006)
J. Exp. Bot
, vol.57
, pp. 1493-1499
-
-
Lilley, K.S.1
Dupree, P.2
-
42
-
-
0033051101
-
Direct analysis of protein complexes using mass spectrometry
-
Link, A. J., J. Eng, D. M. Schieltz, E. Carmack, G. J. Mize, D. R. Morris, B. M. Garvik, and J. R. Yates. 1999. Direct analysis of protein complexes using mass spectrometry. Nat. Biotechnol. 17:676-682.
-
(1999)
Nat. Biotechnol
, vol.17
, pp. 676-682
-
-
Link, A.J.1
Eng, J.2
Schieltz, D.M.3
Carmack, E.4
Mize, G.J.5
Morris, D.R.6
Garvik, B.M.7
Yates, J.R.8
-
43
-
-
0033667456
-
A comparison of silver stain and SYPRO Ruby protein gel stain with respect to protein detection in two-dimensional gels and identification by peptide mass profiling
-
Lopez, M. F., K. Berggren, E. Chernokalskaya, A. Lazarev, M. Robinson, and W. F. Patton. 2000. A comparison of silver stain and SYPRO Ruby protein gel stain with respect to protein detection in two-dimensional gels and identification by peptide mass profiling. Electrophoresis 21:3673-3683.
-
(2000)
Electrophoresis
, vol.21
, pp. 3673-3683
-
-
Lopez, M.F.1
Berggren, K.2
Chernokalskaya, E.3
Lazarev, A.4
Robinson, M.5
Patton, W.F.6
-
44
-
-
34247342702
-
Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants
-
Maor, R., A. Jones, T. S. Nuhse, D. J. Studholme, S. C. Peck,, and K. Shirasu. 2007. Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants. Mol. Cell. Proteomics 6:601-610.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 601-610
-
-
Maor, R.1
Jones, A.2
Nuhse, T.S.3
Studholme, D.J.4
Peck, S.C.5
Shirasu, K.6
-
45
-
-
21244455506
-
Comparison of protein solubilization methods suitable for proteomic analysis of soybean seed proteins
-
Natarajan, S., C. P. Xu, T. J. Caperna, and W. M. Garrett. 2005. Comparison of protein solubilization methods suitable for proteomic analysis of soybean seed proteins. Anal. Biochem. 342:214-220.
-
(2005)
Anal. Biochem
, vol.342
, pp. 214-220
-
-
Natarajan, S.1
Xu, C.P.2
Caperna, T.J.3
Garrett, W.M.4
-
46
-
-
0016711037
-
High resolution two-dimensional electrophoresis of proteins
-
O'Farrell, P. H. 1975. High resolution two-dimensional electrophoresis of proteins. J. Biol. Chem. 250:4007-4021.
-
(1975)
J. Biol. Chem
, vol.250
, pp. 4007-4021
-
-
O'Farrell, P.H.1
-
47
-
-
0037023859
-
Detection technologies in proteome analysis
-
Patton, W. F. 2002. Detection technologies in proteome analysis. J. Chromatogr. B 771:3-31.
-
(2002)
J. Chromatogr. B
, vol.771
, pp. 3-31
-
-
Patton, W.F.1
-
48
-
-
0032959478
-
Proteomics and automation
-
Quadroni, M. and P. James. 1999. Proteomics and automation. Electrophoresis 20:664-677.
-
(1999)
Electrophoresis
, vol.20
, pp. 664-677
-
-
Quadroni, M.1
James, P.2
-
49
-
-
0036208433
-
Two-dimensional gel electrophoresis in proteomics: Old, old fashioned, but it still climbs up the mountains
-
Rabilloud, T. 2002. Two-dimensional gel electrophoresis in proteomics: old, old fashioned, but it still climbs up the mountains. Proteomics 2:3-10.
-
(2002)
Proteomics
, vol.2
, pp. 3-10
-
-
Rabilloud, T.1
-
50
-
-
0345058748
-
Rice proteomics: Current status and future perspectives
-
Rakwal, R. and G. K. Agrawal. 2003. Rice proteomics: current status and future perspectives. Electrophoresis 24:3378-3389.
-
(2003)
Electrophoresis
, vol.24
, pp. 3378-3389
-
-
Rakwal, R.1
Agrawal, G.K.2
-
51
-
-
0141788463
-
Tissue-specific expression and localization of safener-induced glutathione S-transferase proteins in Triticum tauschii
-
Riechers, D. E., Q. Zhang, F.-X. Xu, and K. C. Vaughn. 2003. Tissue-specific expression and localization of safener-induced glutathione S-transferase proteins in Triticum tauschii. Planta 217:831-840.
-
(2003)
Planta
, vol.217
, pp. 831-840
-
-
Riechers, D.E.1
Zhang, Q.2
Xu, F.-X.3
Vaughn, K.C.4
-
52
-
-
33750592138
-
Plant proteome analysis: A 2004-2006 update
-
Rossignol, M., J. B. Peltier, H. P. Mock, A. Matros, A. M. Maldonado, and J. V. Jorrin. 2006. Plant proteome analysis: a 2004-2006 update. Proteomics 6:5529-5548.
-
(2006)
Proteomics
, vol.6
, pp. 5529-5548
-
-
Rossignol, M.1
Peltier, J.B.2
Mock, H.P.3
Matros, A.4
Maldonado, A.M.5
Jorrin, J.V.6
-
53
-
-
34848909425
-
Plant plasma membrane protein extraction and solubilization for proteomic analysis
-
Santoni, V. 2007. Plant plasma membrane protein extraction and solubilization for proteomic analysis. Methods Mol. Biol. 355:93-109.
-
(2007)
Methods Mol. Biol
, vol.355
, pp. 93-109
-
-
Santoni, V.1
-
54
-
-
2942724347
-
Proteomic analysis of Arabidopsis glutathione S-transferases from benoxacor- and copper-treated seedlings
-
Smith, A. P., B. P. DeRidder, W. J. Guo, E. H. Seeley, F. E. Regnier, and P. B. Goldsbrough. 2004. Proteomic analysis of Arabidopsis glutathione S-transferases from benoxacor- and copper-treated seedlings. J. Biol. Chem. 279:26098-26104.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 26098-26104
-
-
Smith, A.P.1
DeRidder, B.P.2
Guo, W.J.3
Seeley, E.H.4
Regnier, F.E.5
Goldsbrough, P.B.6
-
55
-
-
33747662295
-
A simple protocol for protein extraction of recalcitrant fruit tissues suitable for 2-DE and MS analysis
-
Song, J., G. Braun, E. Bevis, and K. Doncaster. 2006. A simple protocol for protein extraction of recalcitrant fruit tissues suitable for 2-DE and MS analysis. Electrophoresis 27:3144-3151.
-
(2006)
Electrophoresis
, vol.27
, pp. 3144-3151
-
-
Song, J.1
Braun, G.2
Bevis, E.3
Doncaster, K.4
-
56
-
-
33746577494
-
Concepts and approaches towards understanding the cellular redox proteome
-
Stroher, E. and K. J. Dietz. 2006. Concepts and approaches towards understanding the cellular redox proteome. Plant Biol. (Stuttg.) 8:407-418.
-
(2006)
Plant Biol. (Stuttg.)
, vol.8
, pp. 407-418
-
-
Stroher, E.1
Dietz, K.J.2
-
57
-
-
33846488076
-
Shotgun glycopeptide capture approach coupled with mass spectrometry for comprehensive glycoproteomics
-
Sun, B., J. A. Ranish, A. G. Utleg, J. T. White, X. Yan, B. Lin, and L. Hood. 2007. Shotgun glycopeptide capture approach coupled with mass spectrometry for comprehensive glycoproteomics. Mol. Cell. Proteomics 6:141-149.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 141-149
-
-
Sun, B.1
Ranish, J.A.2
Utleg, A.G.3
White, J.T.4
Yan, X.5
Lin, B.6
Hood, L.7
-
58
-
-
18844392542
-
A proteome analysis of the yeast response to the herbicide 2,4- dichlorophenoxyacetic acid
-
Teixeira, M. C., P. M. Santos, A. R. Fernandes, and I. Sa-Correia. 2005. A proteome analysis of the yeast response to the herbicide 2,4- dichlorophenoxyacetic acid. Proteomics 5:1889-1901.
-
(2005)
Proteomics
, vol.5
, pp. 1889-1901
-
-
Teixeira, M.C.1
Santos, P.M.2
Fernandes, A.R.3
Sa-Correia, I.4
-
59
-
-
0343376097
-
Difference gel electrophoresis: A single gel method for detecting changes in protein extracts
-
Unlu, M., M. E. Morgan, and J. S. Minden. 1997. Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 18:2071-2077.
-
(1997)
Electrophoresis
, vol.18
, pp. 2071-2077
-
-
Unlu, M.1
Morgan, M.E.2
Minden, J.S.3
-
60
-
-
33750114060
-
Efficient extraction of proteins from woody plant samples for two-dimensional electrophoresis
-
Valcu, C. M. and K. Schlink. 2006. Efficient extraction of proteins from woody plant samples for two-dimensional electrophoresis. Proteomics 6:4166-4175.
-
(2006)
Proteomics
, vol.6
, pp. 4166-4175
-
-
Valcu, C.M.1
Schlink, K.2
-
61
-
-
1242328741
-
Fluorescent two-dimensional difference gel electrophoresis unveils the potential of gel-based proteomics
-
Van den Bergh, G. and L. Arckens. 2004. Fluorescent two-dimensional difference gel electrophoresis unveils the potential of gel-based proteomics. Curr. Opin. Biotechnol. 15:38-43.
-
(2004)
Curr. Opin. Biotechnol
, vol.15
, pp. 38-43
-
-
Van den Bergh, G.1
Arckens, L.2
-
62
-
-
34250636716
-
Overlap of proteome changes in Medicago truncatula in response to auxin and Sinorhizobium meliloti
-
Van Noorden, G. E., T. Kerim, N. Goffard, R. Wiblin, F. I. Pellerone, B. G. Rolfe, and U. Mathesius. 2007. Overlap of proteome changes in Medicago truncatula in response to auxin and Sinorhizobium meliloti. Plant Physiol. 144:1115-1131.
-
(2007)
Plant Physiol
, vol.144
, pp. 1115-1131
-
-
Van Noorden, G.E.1
Kerim, T.2
Goffard, N.3
Wiblin, R.4
Pellerone, F.I.5
Rolfe, B.G.6
Mathesius, U.7
-
63
-
-
33646584893
-
Optimization of protein extraction and solubilization for mature grape berry clusters
-
Vincent, D., M. D. Wheatley, and G. R. Cramer. 2006. Optimization of protein extraction and solubilization for mature grape berry clusters. Electrophoresis 27:1853-1865.
-
(2006)
Electrophoresis
, vol.27
, pp. 1853-1865
-
-
Vincent, D.1
Wheatley, M.D.2
Cramer, G.R.3
-
64
-
-
33745966233
-
A universal and rapid protocol for protein extraction from recalcitrant plant tissues for proteomic analysis
-
Wang, W., R. Vignani, M. Scali, and M. Cresti. 2006. A universal and rapid protocol for protein extraction from recalcitrant plant tissues for proteomic analysis. Electrophoresis 27:2782-2786.
-
(2006)
Electrophoresis
, vol.27
, pp. 2782-2786
-
-
Wang, W.1
Vignani, R.2
Scali, M.3
Cresti, M.4
-
65
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
Washburn, M. P., D. Wolters, and J. R Yates. 2001. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 19:242-247.
-
(2001)
Nat. Biotechnol
, vol.19
, pp. 242-247
-
-
Washburn, M.P.1
Wolters, D.2
Yates, J.R.3
-
66
-
-
0029033175
-
Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium
-
Wasinger, V. C., S. J. Cordwell, A. Cerpa-Poljak, J. X. Yan, A. A. Gooley, M. R. Wilkins, M. W. Duncan, R. Harris, K. L. Williams, and I. Humphery-Smith. 1995. Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium. Electrophoresis 16:1090-1094.
-
(1995)
Electrophoresis
, vol.16
, pp. 1090-1094
-
-
Wasinger, V.C.1
Cordwell, S.J.2
Cerpa-Poljak, A.3
Yan, J.X.4
Gooley, A.A.5
Wilkins, M.R.6
Duncan, M.W.7
Harris, R.8
Williams, K.L.9
Humphery-Smith, I.10
-
67
-
-
34047164035
-
Glycoproteomics based on tandem mass spectrometry of glycopeptides
-
Wuhrer, M., M. I. Catalina, A. M. Deelder, and C. H. Hokke. 2007. Glycoproteomics based on tandem mass spectrometry of glycopeptides. J. Chromatogr. B 849:115-128.
-
(2007)
J. Chromatogr. B
, vol.849
, pp. 115-128
-
-
Wuhrer, M.1
Catalina, M.I.2
Deelder, A.M.3
Hokke, C.H.4
-
68
-
-
33749529109
-
Polyethylene glycol fractionation improved detection of low-abundant proteins by two-dimensional electrophoresis analysis of plant proteome
-
Xi J, X. Wang, S. Li, X. Zhou, L. Yue, J. Fan, and D. Hao. 2006. Polyethylene glycol fractionation improved detection of low-abundant proteins by two-dimensional electrophoresis analysis of plant proteome. Phytochemistry 67:2341-2348.
-
(2006)
Phytochemistry
, vol.67
, pp. 2341-2348
-
-
Xi, J.1
Wang, X.2
Li, S.3
Zhou, X.4
Yue, L.5
Fan, J.6
Hao, D.7
-
69
-
-
0036740896
-
Tandemly duplicated safener-induced glutathione S-transferase genes from Triticum tauschii contribute to genome- and organspecific expression in hexaploid wheat
-
Xu, F. X., E. S. Lagudah, S. P. Moose, and D. E. Riechers. 2002. Tandemly duplicated safener-induced glutathione S-transferase genes from Triticum tauschii contribute to genome- and organspecific expression in hexaploid wheat. Plant Physiol. 130:362-373.
-
(2002)
Plant Physiol
, vol.130
, pp. 362-373
-
-
Xu, F.X.1
Lagudah, E.S.2
Moose, S.P.3
Riechers, D.E.4
-
70
-
-
3843109223
-
Proteome-level differences between auxinic herbicide-susceptible and -resistant wild mustard (Sinapis arvensis L.)
-
Yajima, W., J. C. Hall, and N. V. Kav. 2004. Proteome-level differences between auxinic herbicide-susceptible and -resistant wild mustard (Sinapis arvensis L.). J. Agric. Food Chem. 52:5063-5070.
-
(2004)
J. Agric. Food Chem
, vol.52
, pp. 5063-5070
-
-
Yajima, W.1
Hall, J.C.2
Kav, N.V.3
-
71
-
-
33845290242
-
An efficient protein preparation for proteomic analysis of developing cotton fibers by 2-DE
-
Yao, Y., Y. Yang, and Liu, J. 2006. An efficient protein preparation for proteomic analysis of developing cotton fibers by 2-DE. Electrophoresis 27:4559-4569.
-
(2006)
Electrophoresis
, vol.27
, pp. 4559-4569
-
-
Yao, Y.1
Yang, Y.2
Liu, J.3
-
72
-
-
0031962612
-
Mass spectrometry and the age of the proteome
-
Yates, J. R. III. 1998. Mass spectrometry and the age of the proteome. J. Mass Spectrom. 33:1-19.
-
(1998)
J. Mass Spectrom
, vol.33
, pp. 1-19
-
-
Yates III, J.R.1
-
73
-
-
3042818014
-
Proteomic characterization of herbicide safener-induced proteins in the coleoptile of Triticum tauschii seedlings
-
Zhang, Q. and D. E. Riechers. 2004. Proteomic characterization of herbicide safener-induced proteins in the coleoptile of Triticum tauschii seedlings. Proteomics 4:2058-2071.
-
(2004)
Proteomics
, vol.4
, pp. 2058-2071
-
-
Zhang, Q.1
Riechers, D.E.2
-
74
-
-
34248137521
-
Safeners coordinately induce the expression of multiple proteins and MRP transcripts involved in herbicide metabolism and detoxification in Triticum tauschii seedling tissues
-
Zhang, Q., F. Xu, K. N. Lambert, and D. E. Riechers. 2007. Safeners coordinately induce the expression of multiple proteins and MRP transcripts involved in herbicide metabolism and detoxification in Triticum tauschii seedling tissues. Proteomics 7:1261-1278.
-
(2007)
Proteomics
, vol.7
, pp. 1261-1278
-
-
Zhang, Q.1
Xu, F.2
Lambert, K.N.3
Riechers, D.E.4
|