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Volumn 12, Issue 1, 2008, Pages 86-92

Glycan arrays: biological and medical applications

Author keywords

[No Author keywords available]

Indexed keywords

CYTOKINE; GLYCAN; GLYCOSAMINOGLYCAN; GROWTH FACTOR; LECTIN;

EID: 40849137603     PISSN: 13675931     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpa.2008.01.031     Document Type: Review
Times cited : (144)

References (47)
  • 1
    • 33646457967 scopus 로고    scopus 로고
    • Sweet spots in functional glycomics
    • An excellent review that provides a brief overview of the major functions ascribed to GBPs and of recent advances in glycan array technology.
    • Paulson J.C., Blixt O., and Collins B.E. Sweet spots in functional glycomics. Nat Chem Biol 2 (2007) 238-248. An excellent review that provides a brief overview of the major functions ascribed to GBPs and of recent advances in glycan array technology.
    • (2007) Nat Chem Biol , vol.2 , pp. 238-248
    • Paulson, J.C.1    Blixt, O.2    Collins, B.E.3
  • 3
    • 0029952519 scopus 로고    scopus 로고
    • Structural basis of lectin-carbohydrate recognition
    • Weis W.I., and Drickamer K. Structural basis of lectin-carbohydrate recognition. Annu Rev Biochem 65 (1996) 441-473
    • (1996) Annu Rev Biochem , vol.65 , pp. 441-473
    • Weis, W.I.1    Drickamer, K.2
  • 4
    • 0242449389 scopus 로고    scopus 로고
    • Carbohydrate microarrays
    • A highlight that provides an overview of glycan arrays published in 2002.
    • Mellet C.O., and Garcia Fernandez J.M. Carbohydrate microarrays. Chembiochem 3 (2002) 819-822. A highlight that provides an overview of glycan arrays published in 2002.
    • (2002) Chembiochem , vol.3 , pp. 819-822
    • Mellet, C.O.1    Garcia Fernandez, J.M.2
  • 5
    • 0141953233 scopus 로고    scopus 로고
    • Carbohydrate microarrays - a new set of technologies at the frontiers of glycomics
    • A comprehensive review of the glycan array fabrication methods and sources for carbohydrates.
    • Feizi T., Fazio F., Chai W., and Wong C.H. Carbohydrate microarrays - a new set of technologies at the frontiers of glycomics. Curr Opin Struct Biol 13 (2003) 637-645. A comprehensive review of the glycan array fabrication methods and sources for carbohydrates.
    • (2003) Curr Opin Struct Biol , vol.13 , pp. 637-645
    • Feizi, T.1    Fazio, F.2    Chai, W.3    Wong, C.H.4
  • 6
    • 18744400555 scopus 로고    scopus 로고
    • Carbohydrate microarrays: an advanced technology for functional studies of glycans
    • Shin I., Park S., and Lee M. Carbohydrate microarrays: an advanced technology for functional studies of glycans. Chem Eur J 11 (2005) 2894-2901
    • (2005) Chem Eur J , vol.11 , pp. 2894-2901
    • Shin, I.1    Park, S.2    Lee, M.3
  • 7
    • 33750949914 scopus 로고    scopus 로고
    • Carbohydrate microarrays: survey of fabrication techniques
    • Culf A.S., Cuperlovic-Culf M., and Ouellette R.J. Carbohydrate microarrays: survey of fabrication techniques. Omics 10 (2006) 289-310
    • (2006) Omics , vol.10 , pp. 289-310
    • Culf, A.S.1    Cuperlovic-Culf, M.2    Ouellette, R.J.3
  • 8
    • 0028607322 scopus 로고
    • 12 structures for a reducing hexasaccharide: the isomer barrier to development of single-method saccharide sequencing or synthesis system
    • 12 structures for a reducing hexasaccharide: the isomer barrier to development of single-method saccharide sequencing or synthesis system. Glycobiology 4 (1994) 759-767
    • (1994) Glycobiology , vol.4 , pp. 759-767
    • Laine, R.A.1
  • 9
    • 34250693209 scopus 로고    scopus 로고
    • Deciphering the glycocode: the complexity and analytical challenge of glycomics
    • Pilobello K.T., and Mahal L. Deciphering the glycocode: the complexity and analytical challenge of glycomics. Curr Opin Chem Biol 11 (2007) 300-305
    • (2007) Curr Opin Chem Biol , vol.11 , pp. 300-305
    • Pilobello, K.T.1    Mahal, L.2
  • 11
    • 34250815216 scopus 로고    scopus 로고
    • Tailored glycoproteomics and glycan site mapping using saccharide-selective bioorthogonal probes
    • The authors use metabolic oligosaccharide engineering and glycoproteomic methods to identify inventory cellular glycoproteins.
    • Hanson S.R., Hsu T.L., Weerapana E., Kishikawa K., Simon G.M., Cravatt B.F., and Wong C.H. Tailored glycoproteomics and glycan site mapping using saccharide-selective bioorthogonal probes. J Am Chem Soc 129 (2007) 7266-7267. The authors use metabolic oligosaccharide engineering and glycoproteomic methods to identify inventory cellular glycoproteins.
    • (2007) J Am Chem Soc , vol.129 , pp. 7266-7267
    • Hanson, S.R.1    Hsu, T.L.2    Weerapana, E.3    Kishikawa, K.4    Simon, G.M.5    Cravatt, B.F.6    Wong, C.H.7
  • 14
    • 33747894211 scopus 로고    scopus 로고
    • Two categories of mammalian galactose-binding receptors distinguished by glycan array profiling
    • Coombs P.J., Taylor M.E., and Drickamer K. Two categories of mammalian galactose-binding receptors distinguished by glycan array profiling. Glycobiology 16 (2006) 1C-7C
    • (2006) Glycobiology , vol.16
    • Coombs, P.J.1    Taylor, M.E.2    Drickamer, K.3
  • 15
    • 10344233222 scopus 로고    scopus 로고
    • Printed covalent glycan array for ligand profiling of diverse glycan binding proteins
    • An array of more than 200 carbohydrates on a slide used to analyze the specific binding of mammalian, plant, viral and bacterial lectins, antibodies, and intact viruses.
    • Blixt O., Head S., Mondala T., Scanlan C., Huflejt M.E., Alvarez R., Bryan M.C., Fazio F., Calarese D., Stevens J., et al. Printed covalent glycan array for ligand profiling of diverse glycan binding proteins. Proc Natl Acad Sci U S A 101 (2004) 17033-17038. An array of more than 200 carbohydrates on a slide used to analyze the specific binding of mammalian, plant, viral and bacterial lectins, antibodies, and intact viruses.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 17033-17038
    • Blixt, O.1    Head, S.2    Mondala, T.3    Scanlan, C.4    Huflejt, M.E.5    Alvarez, R.6    Bryan, M.C.7    Fazio, F.8    Calarese, D.9    Stevens, J.10
  • 16
    • 33746301220 scopus 로고    scopus 로고
    • High-throughput carbohydrate microarray analysis of 24 lectins
    • Manimala J.C., Roach T.A., Li Z., and Gildersleeve J.C. High-throughput carbohydrate microarray analysis of 24 lectins. Angew Chem Int Ed 45 (2006) 3607-3610
    • (2006) Angew Chem Int Ed , vol.45 , pp. 3607-3610
    • Manimala, J.C.1    Roach, T.A.2    Li, Z.3    Gildersleeve, J.C.4
  • 18
    • 33644946682 scopus 로고    scopus 로고
    • Microarray of synthetic heparin oligosaccharides
    • The first report of heparin arrays will be useful to assay the specificity of heparin-protein interactions.
    • de Paz J.L., Noti C., and Seeberger P.H. Microarray of synthetic heparin oligosaccharides. J Am Chem Soc 128 (2006) 2766-2767. The first report of heparin arrays will be useful to assay the specificity of heparin-protein interactions.
    • (2006) J Am Chem Soc , vol.128 , pp. 2766-2767
    • de Paz, J.L.1    Noti, C.2    Seeberger, P.H.3
  • 19
    • 33745361839 scopus 로고    scopus 로고
    • Discovery of a TNF-α antagonist using chondroitin sulfate microarrays
    • Tully S.E., Rawat M., and Hsieh-Wilson L. Discovery of a TNF-α antagonist using chondroitin sulfate microarrays. J Am Chem Soc 128 (2006) 7740-7741
    • (2006) J Am Chem Soc , vol.128 , pp. 7740-7741
    • Tully, S.E.1    Rawat, M.2    Hsieh-Wilson, L.3
  • 20
    • 33747618728 scopus 로고    scopus 로고
    • Sulfation patterns of glycosaminoglycans encode molecular recognition and activity
    • Comprehensive study using a chrondroitin array to assay binding specificity of different growth factors and sulfation patterns important for neurite outgrowth.
    • Gama C.I., Tully S.E., Sotogaku N., Clark P.M., Rawat M., Vaidehi N., Goddard III W.A., Nishi A., and Hsieh-Wilson L.C. Sulfation patterns of glycosaminoglycans encode molecular recognition and activity. Nat Chem Biol 2 (2006) 467-473. Comprehensive study using a chrondroitin array to assay binding specificity of different growth factors and sulfation patterns important for neurite outgrowth.
    • (2006) Nat Chem Biol , vol.2 , pp. 467-473
    • Gama, C.I.1    Tully, S.E.2    Sotogaku, N.3    Clark, P.M.4    Rawat, M.5    Vaidehi, N.6    Goddard III, W.A.7    Nishi, A.8    Hsieh-Wilson, L.C.9
  • 21
    • 26444450696 scopus 로고    scopus 로고
    • Dissection of the carbohydrate specificity of the broadly neutralizing anti-HIV-1 antibody 2G12
    • The authors use a specially designed oligomannose array to detail the carbohydrate-binding specificity of a broadly neutralizing anti-HIV antibody.
    • Calarese D.A., Lee H.K., Huang C.Y., Best M.D., Astronomo R.D., Stanfield R.L., Katinger H., Burton D.R., Wong C.H., and Wilson I.A. Dissection of the carbohydrate specificity of the broadly neutralizing anti-HIV-1 antibody 2G12. Proc Natl Acad Sci U S A 102 (2005) 13372-13377. The authors use a specially designed oligomannose array to detail the carbohydrate-binding specificity of a broadly neutralizing anti-HIV antibody.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 13372-13377
    • Calarese, D.A.1    Lee, H.K.2    Huang, C.Y.3    Best, M.D.4    Astronomo, R.D.5    Stanfield, R.L.6    Katinger, H.7    Burton, D.R.8    Wong, C.H.9    Wilson, I.A.10
  • 22
    • 33846125228 scopus 로고    scopus 로고
    • Carbohydrate microarrays as tools in HIV
    • An excellent review that illustrates carbohydrate arrays as useful tools for HIV study.
    • Ratner D.M., and Seeberger P.H. Carbohydrate microarrays as tools in HIV. Curr Pharm Des 13 (2007) 173-183. An excellent review that illustrates carbohydrate arrays as useful tools for HIV study.
    • (2007) Curr Pharm Des , vol.13 , pp. 173-183
    • Ratner, D.M.1    Seeberger, P.H.2
  • 24
    • 4844227717 scopus 로고    scopus 로고
    • Glycan arrays lead to the discovery of autoimmunogenic activity of SARS-CoV
    • Wang D., and Lu J. Glycan arrays lead to the discovery of autoimmunogenic activity of SARS-CoV. Physiol Genomics 18 (2004) 245-248
    • (2004) Physiol Genomics , vol.18 , pp. 245-248
    • Wang, D.1    Lu, J.2
  • 25
    • 39049120726 scopus 로고    scopus 로고
    • Pathogen specific carbohydrate antigen microarrays: a chip for detection of Salmonella O-antigen specific antibodies
    • Blixt O., Hoffmann J., Svenson S., and Norberg T. Pathogen specific carbohydrate antigen microarrays: a chip for detection of Salmonella O-antigen specific antibodies. Glycoconj J 25 (2008) 27-36
    • (2008) Glycoconj J , vol.25 , pp. 27-36
    • Blixt, O.1    Hoffmann, J.2    Svenson, S.3    Norberg, T.4
  • 26
    • 33750445948 scopus 로고    scopus 로고
    • Polysaccharide microarray technology for the detection of Burkholderia preudomallei and Burkholderia mallei antibodies
    • Parthasarathy N., DeShazer D., England M., and Waag D.M. Polysaccharide microarray technology for the detection of Burkholderia preudomallei and Burkholderia mallei antibodies. Diagn Microbiol Infect Dis 56 (2006) 329-332
    • (2006) Diagn Microbiol Infect Dis , vol.56 , pp. 329-332
    • Parthasarathy, N.1    DeShazer, D.2    England, M.3    Waag, D.M.4
  • 28
    • 30444458986 scopus 로고    scopus 로고
    • Carbohydrate microarray for profiling the antibodies interacting with Globo H tumor antigen
    • The authors demonstrate the potential of carbohydrate arrays as a diagnostic tool for cancer-related glycans.
    • Huang C.Y., Thayer D.A., Chang A.Y., Best M.D., Hoffmann J., Head S., and Wong C.H. Carbohydrate microarray for profiling the antibodies interacting with Globo H tumor antigen. Proc Natl Acad Sci U S A 103 (2006) 15-20. The authors demonstrate the potential of carbohydrate arrays as a diagnostic tool for cancer-related glycans.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 15-20
    • Huang, C.Y.1    Thayer, D.A.2    Chang, A.Y.3    Best, M.D.4    Hoffmann, J.5    Head, S.6    Wong, C.H.7
  • 30
    • 33748809567 scopus 로고    scopus 로고
    • Screening of glycosylation patterns in serum using natural glycoprotein microarrays and multi-lectin fluorescence detection
    • Patwa T.H., Zhao J., Anderson M.A., Simeone D.M., and Lubman D.M. Screening of glycosylation patterns in serum using natural glycoprotein microarrays and multi-lectin fluorescence detection. Anal Chem 78 (2006) 6411-6421
    • (2006) Anal Chem , vol.78 , pp. 6411-6421
    • Patwa, T.H.1    Zhao, J.2    Anderson, M.A.3    Simeone, D.M.4    Lubman, D.M.5
  • 32
    • 33646458337 scopus 로고    scopus 로고
    • Carbohydrate array analysis of anti-Tn antibodies and lectins reveals unexpected specificities: implications for diagnostic and vaccine development
    • Explores the potential for using the Tn carbohydrate antigen as a biomarker by analyzing the binding specificity with a glycan array.
    • Manimala J.C., Li Z., Jain A., VedBrat S., and Gildersleeve J.C. Carbohydrate array analysis of anti-Tn antibodies and lectins reveals unexpected specificities: implications for diagnostic and vaccine development. Chembiochem 6 (2005) 2229-2241. Explores the potential for using the Tn carbohydrate antigen as a biomarker by analyzing the binding specificity with a glycan array.
    • (2005) Chembiochem , vol.6 , pp. 2229-2241
    • Manimala, J.C.1    Li, Z.2    Jain, A.3    VedBrat, S.4    Gildersleeve, J.C.5
  • 33
    • 0035054508 scopus 로고    scopus 로고
    • Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity
    • Hooper L.V., and Gordon J.I. Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity. Glycobiology 11 (2001) 1R-10R
    • (2001) Glycobiology , vol.11
    • Hooper, L.V.1    Gordon, J.I.2
  • 34
    • 29444433087 scopus 로고    scopus 로고
    • Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities
    • Together with [35], uses a +200-member glycan array to probe binding specificity of hemagglutinin variants and site-directed mutants to detail the mutations that result in changes in specificity allowing for avian flu strains to cross species.
    • Stevens J., Blixt O., Glaser L., Taubenberger J.K., Palese P., Paulson J.C., and Wilson I.A. Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities. J Mol Biol 355 (2006) 1143-1155. Together with [35], uses a +200-member glycan array to probe binding specificity of hemagglutinin variants and site-directed mutants to detail the mutations that result in changes in specificity allowing for avian flu strains to cross species.
    • (2006) J Mol Biol , vol.355 , pp. 1143-1155
    • Stevens, J.1    Blixt, O.2    Glaser, L.3    Taubenberger, J.K.4    Palese, P.5    Paulson, J.C.6    Wilson, I.A.7
  • 35
    • 33645981586 scopus 로고    scopus 로고
    • Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus
    • Stevens J., Blixt O., Tumpey T.M., Taubenberger J.K., Paulson J.C., and Wilson I.A. Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. Science 312 (2006) 404-410
    • (2006) Science , vol.312 , pp. 404-410
    • Stevens, J.1    Blixt, O.2    Tumpey, T.M.3    Taubenberger, J.K.4    Paulson, J.C.5    Wilson, I.A.6
  • 37
    • 10644297503 scopus 로고    scopus 로고
    • The use of carbohydrate microarrays to study carbohydrate-cell interactions and to detect pathogens
    • Disney M.D., and Seeberger P.H. The use of carbohydrate microarrays to study carbohydrate-cell interactions and to detect pathogens. Chem Biol 11 (2004) 1701-1707
    • (2004) Chem Biol , vol.11 , pp. 1701-1707
    • Disney, M.D.1    Seeberger, P.H.2
  • 38
    • 26444542946 scopus 로고    scopus 로고
    • Identification and characterization of binding properties of Helicobacter pylori by glycoconjugate arrays
    • Walz A., Odenbreit S., Mahdavi J., Boren T., and Ruhl S. Identification and characterization of binding properties of Helicobacter pylori by glycoconjugate arrays. Glycobiology 15 (2005) 700-708
    • (2005) Glycobiology , vol.15 , pp. 700-708
    • Walz, A.1    Odenbreit, S.2    Mahdavi, J.3    Boren, T.4    Ruhl, S.5
  • 39
    • 2442580955 scopus 로고    scopus 로고
    • High-throughput identification of fucosyltransferase inhibitors using carbohydrate microarrays
    • Bryan M.C., Lee L.V., and Wong C.H. High-throughput identification of fucosyltransferase inhibitors using carbohydrate microarrays. Bioorg Med Chem Lett 14 (2004) 3185-3188
    • (2004) Bioorg Med Chem Lett , vol.14 , pp. 3185-3188
    • Bryan, M.C.1    Lee, L.V.2    Wong, C.H.3
  • 40
    • 34548725053 scopus 로고    scopus 로고
    • Quantitative analysis of carbohydrate-protein interactions using glycan microarrays: determination of surface and solution dissociation constants
    • The authors demonstrate that glycan arrays can be used for high-throughput quantitative analysis of carbohydrate-protein interactions.
    • Liang P.H., Wang S.K., and Wong C.H. Quantitative analysis of carbohydrate-protein interactions using glycan microarrays: determination of surface and solution dissociation constants. J Am Chem Soc 129 (2007) 11177-11184. The authors demonstrate that glycan arrays can be used for high-throughput quantitative analysis of carbohydrate-protein interactions.
    • (2007) J Am Chem Soc , vol.129 , pp. 11177-11184
    • Liang, P.H.1    Wang, S.K.2    Wong, C.H.3
  • 41
    • 35048892795 scopus 로고    scopus 로고
    • An aminoglycoside microarray platform for directly monitoring and studying antibiotic resistance
    • Disney M.D., and Barrett O.J. An aminoglycoside microarray platform for directly monitoring and studying antibiotic resistance. Biochemistry 46 (2007) 11223-11230
    • (2007) Biochemistry , vol.46 , pp. 11223-11230
    • Disney, M.D.1    Barrett, O.J.2
  • 42
    • 1842736563 scopus 로고    scopus 로고
    • Aminoglycoside array for the high-throughput analysis of small molecule-RNA interactions
    • Bryan M.C., and Wong C.H. Aminoglycoside array for the high-throughput analysis of small molecule-RNA interactions. Tetrahedron Lett 45 (2004) 3639-3642
    • (2004) Tetrahedron Lett , vol.45 , pp. 3639-3642
    • Bryan, M.C.1    Wong, C.H.2
  • 43
    • 34248344690 scopus 로고    scopus 로고
    • Carbohydrate microarray for assaying galactosyltransferase activity
    • Park S., and Shin I. Carbohydrate microarray for assaying galactosyltransferase activity. Org Lett 9 (2007) 1675-1678
    • (2007) Org Lett , vol.9 , pp. 1675-1678
    • Park, S.1    Shin, I.2
  • 44
    • 1842830161 scopus 로고    scopus 로고
    • Carbohydrate chips for studying high-throughput carbohydrate-protein interactions
    • A model study that uses glycan microarrays for the evaluation of glycan-processing enzyme specificities.
    • Park K., Lee M.R., Pyo S.J., and Shin I. Carbohydrate chips for studying high-throughput carbohydrate-protein interactions. J Am Chem Soc 126 (2004) 4812-4819. A model study that uses glycan microarrays for the evaluation of glycan-processing enzyme specificities.
    • (2004) J Am Chem Soc , vol.126 , pp. 4812-4819
    • Park, K.1    Lee, M.R.2    Pyo, S.J.3    Shin, I.4
  • 45
    • 32344442671 scopus 로고    scopus 로고
    • Identification of new acceptor specificities of glycosyltransferase R with the aid of substrate microarrays
    • Seibel J., Hellmuth H., Hofer B., Kicinska A.M., and Schmalbruch B. Identification of new acceptor specificities of glycosyltransferase R with the aid of substrate microarrays. Chembiochem 7 (2006) 310-320
    • (2006) Chembiochem , vol.7 , pp. 310-320
    • Seibel, J.1    Hellmuth, H.2    Hofer, B.3    Kicinska, A.M.4    Schmalbruch, B.5
  • 47
    • 39049147021 scopus 로고    scopus 로고
    • Glyco-array technology for efficient monitoring of plant cell wall glycosyltransferase activities
    • Shipp M., Nadella R., Gao H., Farkas V., Sigrist H., and Faik A. Glyco-array technology for efficient monitoring of plant cell wall glycosyltransferase activities. Glycoconj J 25 (2008) 49-58
    • (2008) Glycoconj J , vol.25 , pp. 49-58
    • Shipp, M.1    Nadella, R.2    Gao, H.3    Farkas, V.4    Sigrist, H.5    Faik, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.