메뉴 건너뛰기




Volumn 410, Issue 1, 2008, Pages 139-146

Positive selection on the Plasmodium falciparum sporozoite threonine-asparagine-rich protein: Analysis of isolates mainly from low endemic areas

Author keywords

Field isolates; Molecular epidemiology; Polymorphism; Sequence; Sporozoite; Vaccine

Indexed keywords

ASPARAGINE; THREONINE;

EID: 40649089377     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2007.12.006     Document Type: Article
Times cited : (9)

References (36)
  • 1
    • 0015310384 scopus 로고
    • The sampling theory of selectively neutral alleles
    • Ewens W.J. The sampling theory of selectively neutral alleles Theor. Popul. Biol. 3 1972 87 112
    • (1972) Theor. Popul. Biol. , vol.3 , pp. 87-112
    • Ewens, W.J.1
  • 2
    • 0033911640 scopus 로고    scopus 로고
    • Hitchhiking under positive Darwinian selection
    • Fay J.C. Wu C.I. Hitchhiking under positive Darwinian selection Genetics 155 2000 1405 1413
    • (2000) Genetics , vol.155 , pp. 1405-1413
    • Fay, J.C.1    Wu, C.I.2
  • 3
    • 33751185334 scopus 로고    scopus 로고
    • Plasmodium falciparum: worldwide sequence diversity and evolution of the malaria vaccine candidate merozoite surface protein-2 (MSP-2)
    • Ferreira M.U. Hartl D.L. Plasmodium falciparum : worldwide sequence diversity and evolution of the malaria vaccine candidate merozoite surface protein-2 (MSP-2) Exp. Parasitol. 115 2007 32 40
    • (2007) Exp. Parasitol. , vol.115 , pp. 32-40
    • Ferreira, M.U.1    Hartl, D.L.2
  • 4
    • 0028302559 scopus 로고
    • Cloning and characterization of a novel Plasmodium falciparum sporozoite surface antigen, STARP
    • Fidock D.A. Cloning and characterization of a novel Plasmodium falciparum sporozoite surface antigen, STARP Mol. Biochem. Parasitol. 64 1994 219 232
    • (1994) Mol. Biochem. Parasitol. , vol.64 , pp. 219-232
    • Fidock, D.A.1
  • 5
    • 0028020996 scopus 로고
    • Conservation of the Plasmodium falciparum sporozoite surface protein gene, STARP, in field isolates and distinct species of Plasmodium
    • Fidock D.A. Conservation of the Plasmodium falciparum sporozoite surface protein gene, STARP, in field isolates and distinct species of Plasmodium Mol. Biochem. Parasitol. 67 1994 255 267
    • (1994) Mol. Biochem. Parasitol. , vol.67 , pp. 255-267
    • Fidock, D.A.1
  • 6
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu Y.X. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection Genetics 147 1997 915 925
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.X.1
  • 7
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu Y.X. Li W.H. Statistical tests of neutrality of mutations Genetics 133 1993 693 709
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 8
    • 0036724848 scopus 로고    scopus 로고
    • Malaria: current status of control, diagnosis, treatment, and a proposed agenda for research and development
    • Guerin P.J. Malaria: current status of control, diagnosis, treatment, and a proposed agenda for research and development Lancet Infect. Dis. 2 2002 564 573
    • (2002) Lancet Infect. Dis. , vol.2 , pp. 564-573
    • Guerin, P.J.1
  • 9
    • 0022211482 scopus 로고
    • Statistical properties of the number of recombination events in the history of a sample of DNA sequences
    • Hudson R.R. Kaplan N.L. Statistical properties of the number of recombination events in the history of a sample of DNA sequences Genetics 111 1985 147 164
    • (1985) Genetics , vol.111 , pp. 147-164
    • Hudson, R.R.1    Kaplan, N.L.2
  • 10
    • 0025959788 scopus 로고
    • Circumsporozoite protein genes of malaria parasites (Plasmodium spp.): evidence for positive selection on immunogenic regions
    • Hughes A.L. Circumsporozoite protein genes of malaria parasites ( Plasmodium spp.): evidence for positive selection on immunogenic regions Genetics 127 1991 345 353
    • (1991) Genetics , vol.127 , pp. 345-353
    • Hughes, A.L.1
  • 11
    • 0026549203 scopus 로고
    • Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum
    • Hughes A.L. Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum Mol. Biol. Evol. 9 1992 381 393
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 381-393
    • Hughes, A.L.1
  • 12
    • 4644308502 scopus 로고    scopus 로고
    • The evolution of amino acid repeat arrays in Plasmodium and other organisms
    • Hughes A.L. The evolution of amino acid repeat arrays in Plasmodium and other organisms J. Mol. Evol. 59 2004 528 535
    • (2004) J. Mol. Evol. , vol.59 , pp. 528-535
    • Hughes, A.L.1
  • 13
    • 0029015776 scopus 로고
    • Natural selection on Plasmodium surface proteins
    • Hughes M.K. Hughes A.L. Natural selection on Plasmodium surface proteins Mol. Biochem. Parasitol. 71 1995 99 113
    • (1995) Mol. Biochem. Parasitol. , vol.71 , pp. 99-113
    • Hughes, M.K.1    Hughes, A.L.2
  • 14
    • 0035823291 scopus 로고    scopus 로고
    • Very large long-term effective population size in the virulent human malaria parasite Plasmodium falciparum
    • Hughes A.L. Verra F. Very large long-term effective population size in the virulent human malaria parasite Plasmodium falciparum Proc. R. Soc. Lond., B Biol. Sci. 268 2001 1855 1860
    • (2001) Proc. R. Soc. Lond., B Biol. Sci. , vol.268 , pp. 1855-1860
    • Hughes, A.L.1    Verra, F.2
  • 15
    • 0026575345 scopus 로고
    • Sequence variation in the tripeptide repeats and T cell epitopes in P190 (MSA-1) of Plasmodium falciparum from field isolates
    • Jongwutiwes S. Tanabe K. Nakazawa S. Yanagi T. Kanbara H. Sequence variation in the tripeptide repeats and T cell epitopes in P190 (MSA-1) of Plasmodium falciparum from field isolates Mol. Biochem. Parasitol. 51 1992 81 89
    • (1992) Mol. Biochem. Parasitol. , vol.51 , pp. 81-89
    • Jongwutiwes, S.1    Tanabe, K.2    Nakazawa, S.3    Yanagi, T.4    Kanbara, H.5
  • 16
    • 0028116406 scopus 로고
    • Allelic variation in the circumsporozoite protein of Plasmodium falciparum from Thai field isolates
    • Jongwutiwes S. Tanabe K. Hughes M.K. Kanbara H. Hughes A.L. Allelic variation in the circumsporozoite protein of Plasmodium falciparum from Thai field isolates Am. J. Trop. Med. Hyg. 51 1994 659 668
    • (1994) Am. J. Trop. Med. Hyg. , vol.51 , pp. 659-668
    • Jongwutiwes, S.1    Tanabe, K.2    Hughes, M.K.3    Kanbara, H.4    Hughes, A.L.5
  • 17
    • 0032078213 scopus 로고    scopus 로고
    • Variation in the thrombospondin-related adhesive protein (TRAP) gene of Plasmodium falciparum from Thai field isolates
    • Jongwutiwes S. Putaporntip C. Kanbara H. Tanabe K. Variation in the thrombospondin-related adhesive protein (TRAP) gene of Plasmodium falciparum from Thai field isolates Mol. Biochem. Parasitol. 92 1998 349 353
    • (1998) Mol. Biochem. Parasitol. , vol.92 , pp. 349-353
    • Jongwutiwes, S.1    Putaporntip, C.2    Kanbara, H.3    Tanabe, K.4
  • 18
    • 0036728807 scopus 로고    scopus 로고
    • The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2
    • Jongwutiwes S. Putaporntip C. Friedman R. Hughes A.L. The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2 Mol. Biol. Evol. 19 2002 1585 1590
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1585-1590
    • Jongwutiwes, S.1    Putaporntip, C.2    Friedman, R.3    Hughes, A.L.4
  • 19
    • 0025817341 scopus 로고
    • Protection against malaria by vaccination with sporozoite surface protein 2 plus CS protein
    • Khusmith S. Charoenvit Y. Kumar S. Sedegah M. Beaudoin R.L. Hoffman S.L. Protection against malaria by vaccination with sporozoite surface protein 2 plus CS protein Science 252 1991 715 718
    • (1991) Science , vol.252 , pp. 715-718
    • Khusmith, S.1    Charoenvit, Y.2    Kumar, S.3    Sedegah, M.4    Beaudoin, R.L.5    Hoffman, S.L.6
  • 20
    • 12444317198 scopus 로고    scopus 로고
    • Identification of specific HepG2 cell binding regions in Plasmodium falciparum sporozoite-threonine–asparagine-rich protein (STARP)
    • Lopez R. Identification of specific HepG2 cell binding regions in Plasmodium falciparum sporozoite-threonine–asparagine-rich protein (STARP) Vaccine 21 2003 2404 2411
    • (2003) Vaccine , vol.21 , pp. 2404-2411
    • Lopez, R.1
  • 21
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald J.H. Kreitman M. Adaptive protein evolution at the Adh locus in Drosophila Nature 351 1991 652 654
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 22
    • 0036199914 scopus 로고    scopus 로고
    • A coalescent-based method for detecting and estimating recombination rates from gene sequences
    • McVean G. Awadalla P. Fearnhead P. A coalescent-based method for detecting and estimating recombination rates from gene sequences Genetics 160 2002 1231 1241
    • (2002) Genetics , vol.160 , pp. 1231-1241
    • McVean, G.1    Awadalla, P.2    Fearnhead, P.3
  • 23
    • 0346056892 scopus 로고    scopus 로고
    • Malaria vaccine developments
    • Moorthy V.S. Good M.F. Hill A.V. Malaria vaccine developments Lancet 363 2004 150 156
    • (2004) Lancet , vol.363 , pp. 150-156
    • Moorthy, V.S.1    Good, M.F.2    Hill, A.V.3
  • 24
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M. Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions Mol. Biol. Evol. 3 1986 418 426
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 25
    • 0030713016 scopus 로고    scopus 로고
    • Plasmodium falciparum sporozoite invasion is inhibited by naturally acquired or experimentally induced polyclonal antibodies to the STARP antigen
    • Pasquetto V. Plasmodium falciparum sporozoite invasion is inhibited by naturally acquired or experimentally induced polyclonal antibodies to the STARP antigen Eur. J. Immunol. 27 1997 2502 2513
    • (1997) Eur. J. Immunol. , vol.27 , pp. 2502-2513
    • Pasquetto, V.1
  • 26
    • 0031840826 scopus 로고    scopus 로고
    • Immunogenicity of four Plasmodium falciparum preerythrocytic antigens in Aotus lemurinus monkeys
    • Perlaza B.L. Immunogenicity of four Plasmodium falciparum preerythrocytic antigens in Aotus lemurinus monkeys Infect. Immun. 66 1998 3423 3428
    • (1998) Infect. Immun. , vol.66 , pp. 3423-3428
    • Perlaza, B.L.1
  • 28
    • 31144473069 scopus 로고    scopus 로고
    • Ancient common ancestry of the merozoite surface protein 1 of Plasmodium vivax as inferred from its homologue in Plasmodium knowlesi
    • Putaporntip C. Jongwutiwes S. Iwasaki T. Kanbara H. Hughes A.L. Ancient common ancestry of the merozoite surface protein 1 of Plasmodium vivax as inferred from its homologue in Plasmodium knowlesi Mol. Biochem. Parasitol. 146 2006 105 108
    • (2006) Mol. Biochem. Parasitol. , vol.146 , pp. 105-108
    • Putaporntip, C.1    Jongwutiwes, S.2    Iwasaki, T.3    Kanbara, H.4    Hughes, A.L.5
  • 29
    • 0032516099 scopus 로고    scopus 로고
    • Malaria's eve: evidence of a recent population bottleneck throughout the world populations of Plasmodium falciparum
    • Rich S.M. Licht M.C. Hudson R.R. Ayala F.J. Malaria's eve: evidence of a recent population bottleneck throughout the world populations of Plasmodium falciparum Proc. Natl. Acad. Sci. USA 95 1998 4425 4430
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 4425-4430
    • Rich, S.M.1    Licht, M.C.2    Hudson, R.R.3    Ayala, F.J.4
  • 30
  • 31
    • 0032839718 scopus 로고    scopus 로고
    • Biased distribution of msp1 and msp2 allelic variants in Plasmodium falciparum populations in Thailand
    • Snounou G. Biased distribution of msp1 and msp2 allelic variants in Plasmodium falciparum populations in Thailand Trans. R. Soc. Trop. Med. Hyg. 93 1999 369 374
    • (1999) Trans. R. Soc. Trop. Med. Hyg. , vol.93 , pp. 369-374
    • Snounou, G.1
  • 32
    • 0021066244 scopus 로고
    • Evolutionary relationship of DNA sequences in finite populations
    • Tajima F. Evolutionary relationship of DNA sequences in finite populations Genetics 105 1983 437 460
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 33
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K. Dudley J. Nei M. Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 Mol. Biol. Evol. 24 2007 1596 1599
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D. Gibson T.J. Plewniak F. Jeanmougin F. Higgins D.G. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res. 25 1997 4876 4882
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 0032960482 scopus 로고    scopus 로고
    • Biased amino acid composition in repeat regions of Plasmodium antigens
    • Verra F. Hughes A.L. Biased amino acid composition in repeat regions of Plasmodium antigens Mol. Biol. Evol. 16 1999 627 633
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 627-633
    • Verra, F.1    Hughes, A.L.2
  • 36
    • 0032584099 scopus 로고    scopus 로고
    • Positive Darwinian selection after gene duplication in primate ribonuclease genes
    • Zhang J. Rosenberg H.F. Nei M. Positive Darwinian selection after gene duplication in primate ribonuclease genes Proc. Natl. Acad. Sci. USA. 95 1998 3708 3713
    • (1998) Proc. Natl. Acad. Sci. USA. , vol.95 , pp. 3708-3713
    • Zhang, J.1    Rosenberg, H.F.2    Nei, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.