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Volumn 72, Issue 3, 2008, Pages 296-305

Rapid and high-throughput genotyping of Staphylococcus epidermidis isolates by automated multilocus variable-number of tandem repeats: A tool for real-time epidemiology

Author keywords

Colonization; Epidemiology; Genotyping; Infection; Multiplex PCR; Staphylococcus epidermidis; VNTR

Indexed keywords

PENICILLIN BINDING PROTEIN 2A;

EID: 39749190530     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2007.12.007     Document Type: Article
Times cited : (29)

References (47)
  • 1
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: a program to analyze DNA sequences
    • Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27 2 (1999) 573-580
    • (1999) Nucleic Acids Res. , vol.27 , Issue.2 , pp. 573-580
    • Benson, G.1
  • 2
    • 0034793318 scopus 로고    scopus 로고
    • Epidemiological validation of pulsed-field gel electrophoresis patterns for methicillin-resistant Staphylococcus aureus
    • Blanc D.S., Struelens M.J., Deplano A., de Ryck R., Hauser P.M., Petignat C., and Francioli P. Epidemiological validation of pulsed-field gel electrophoresis patterns for methicillin-resistant Staphylococcus aureus. J. Clin. Microbiol. 39 10 (2001) 3442-3445
    • (2001) J. Clin. Microbiol. , vol.39 , Issue.10 , pp. 3442-3445
    • Blanc, D.S.1    Struelens, M.J.2    Deplano, A.3    de Ryck, R.4    Hauser, P.M.5    Petignat, C.6    Francioli, P.7
  • 3
    • 0036889095 scopus 로고    scopus 로고
    • Poor value of pulsed-field gel electrophoresis to investigate long-term scale epidemiology of methicillin-resistant Staphylococcus aureus
    • Blanc D.S., Francioli P., and Hauser P.M. Poor value of pulsed-field gel electrophoresis to investigate long-term scale epidemiology of methicillin-resistant Staphylococcus aureus. Infect. Genet. Evol. 2 2 (2002) 145-148
    • (2002) Infect. Genet. Evol. , vol.2 , Issue.2 , pp. 145-148
    • Blanc, D.S.1    Francioli, P.2    Hauser, P.M.3
  • 4
    • 0000250265 scopus 로고
    • Measures of the amount of ecologic association between species
    • Dice L.R. Measures of the amount of ecologic association between species. Ecology 26 3 (1945) 297-302
    • (1945) Ecology , vol.26 , Issue.3 , pp. 297-302
    • Dice, L.R.1
  • 5
    • 0001489753 scopus 로고
    • Algorithms for the reduction of the number of points required to represent a digitized line or its caricature
    • Douglas D., and Peucker T. Algorithms for the reduction of the number of points required to represent a digitized line or its caricature. Can. Cartogr. 10 2 (1973) 112-122
    • (1973) Can. Cartogr. , vol.10 , Issue.2 , pp. 112-122
    • Douglas, D.1    Peucker, T.2
  • 6
    • 0033402241 scopus 로고    scopus 로고
    • Multilocus sequence typing
    • Enright M.C., and Spratt B.G. Multilocus sequence typing. Trends Microbiol. 7 12 (1999) 482-487
    • (1999) Trends Microbiol. , vol.7 , Issue.12 , pp. 482-487
    • Enright, M.C.1    Spratt, B.G.2
  • 7
    • 0034005677 scopus 로고    scopus 로고
    • Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus
    • Enright M.C., Day N.P., Davies C.E., Peacock S.J., and Spratt B.G. Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus. J. Clin. Microbiol. 38 3 (2000) 1008-1015
    • (2000) J. Clin. Microbiol. , vol.38 , Issue.3 , pp. 1008-1015
    • Enright, M.C.1    Day, N.P.2    Davies, C.E.3    Peacock, S.J.4    Spratt, B.G.5
  • 12
    • 0029019608 scopus 로고
    • Typing of Staphylococcus epidermidis colonizing in human nares by pulsed-field gel electrophoresis
    • Hu L., Umeda A., and Amako K. Typing of Staphylococcus epidermidis colonizing in human nares by pulsed-field gel electrophoresis. Microbiol. Immunol. 39 5 (1995) 315-319
    • (1995) Microbiol. Immunol. , vol.39 , Issue.5 , pp. 315-319
    • Hu, L.1    Umeda, A.2    Amako, K.3
  • 13
    • 0028153736 scopus 로고
    • Endemic nosocomial transmission of Staphylococcus epidermidis bacteremia isolates in a neonatal intensive care unit over 10 years
    • Huebner J., Pier G.B., Maslow J.N., Muller E., Shiro H., Parent M., Kropec A., Arbeit R.D., and Goldmann D.A. Endemic nosocomial transmission of Staphylococcus epidermidis bacteremia isolates in a neonatal intensive care unit over 10 years. J. Infect. Dis. 169 3 (1994) 526-531
    • (1994) J. Infect. Dis. , vol.169 , Issue.3 , pp. 526-531
    • Huebner, J.1    Pier, G.B.2    Maslow, J.N.3    Muller, E.4    Shiro, H.5    Parent, M.6    Kropec, A.7    Arbeit, R.D.8    Goldmann, D.A.9
  • 14
  • 15
    • 30744458611 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis for typing of Staphylococcus epidermidis
    • Johansson A., Koskiniemi S., Gottfridsson P., Wistrom J., and Monsen T. Multiple-locus variable-number tandem repeat analysis for typing of Staphylococcus epidermidis. J. Clin. Microbiol. 44 1 (2006) 260-265
    • (2006) J. Clin. Microbiol. , vol.44 , Issue.1 , pp. 260-265
    • Johansson, A.1    Koskiniemi, S.2    Gottfridsson, P.3    Wistrom, J.4    Monsen, T.5
  • 16
    • 24944448590 scopus 로고    scopus 로고
    • Coagulase-negative staphylococcal sepsis in neonates. Association between antibiotic resistance, biofilm formation and the host inflammatory response
    • Klingenberg C., Aarag E., Ronnestad A., Sollid J.E., Abrahamsen T.G., Kjeldsen G., and Flaegstad T. Coagulase-negative staphylococcal sepsis in neonates. Association between antibiotic resistance, biofilm formation and the host inflammatory response. Pediatr. Infect. Dis. J. 24 9 (2005) 817-822
    • (2005) Pediatr. Infect. Dis. J. , vol.24 , Issue.9 , pp. 817-822
    • Klingenberg, C.1    Aarag, E.2    Ronnestad, A.3    Sollid, J.E.4    Abrahamsen, T.G.5    Kjeldsen, G.6    Flaegstad, T.7
  • 18
    • 3242673571 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis
    • Lindstedt B.A., Vardund T., and Kapperud G. Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis. J. Microbiol. Methods 58 2 (2004) 213-222
    • (2004) J. Microbiol. Methods , vol.58 , Issue.2 , pp. 213-222
    • Lindstedt, B.A.1    Vardund, T.2    Kapperud, G.3
  • 19
    • 0028877646 scopus 로고
    • Persistence of a multiresistant clone of Staphylococcus epidermidis in a neonatal intensive-care unit for a four-year period
    • Lyytikainen O., Saxen H., Ryhanen R., Vaara M., and Vuopio-Varkila J. Persistence of a multiresistant clone of Staphylococcus epidermidis in a neonatal intensive-care unit for a four-year period. Clin. Infect. Dis. 20 1 (1995) 24-29
    • (1995) Clin. Infect. Dis. , vol.20 , Issue.1 , pp. 24-29
    • Lyytikainen, O.1    Saxen, H.2    Ryhanen, R.3    Vaara, M.4    Vuopio-Varkila, J.5
  • 21
    • 23044515004 scopus 로고    scopus 로고
    • Genetic relatedness of Staphylococcus epidermidis from infected infants and staff in the neonatal intensive care unit
    • Milisavljevic V., Wu F., Cimmotti J., Haas J., Della-Latta P., Larson E., and Saiman L. Genetic relatedness of Staphylococcus epidermidis from infected infants and staff in the neonatal intensive care unit. Am. J. Infect. Control 33 6 (2005) 341-347
    • (2005) Am. J. Infect. Control , vol.33 , Issue.6 , pp. 341-347
    • Milisavljevic, V.1    Wu, F.2    Cimmotti, J.3    Haas, J.4    Della-Latta, P.5    Larson, E.6    Saiman, L.7
  • 22
    • 33947166709 scopus 로고    scopus 로고
    • Inferring a population structure for Staphylococcus epidermidis from multilocus sequence typing data
    • Miragaia M., Thomas J.C., Couto I., Enright M.C., and de Lencastre H. Inferring a population structure for Staphylococcus epidermidis from multilocus sequence typing data. J. Bacteriol. 189 6 (2007) 2540-2552
    • (2007) J. Bacteriol. , vol.189 , Issue.6 , pp. 2540-2552
    • Miragaia, M.1    Thomas, J.C.2    Couto, I.3    Enright, M.C.4    de Lencastre, H.5
  • 23
    • 0036265952 scopus 로고    scopus 로고
    • Epidemiologic genotyping of methicillin-resistant Staphylococcus aureus by pulsed-field gel electrophoresis at a university hospital and comparison with antibiotyping and protein A and coagulase gene polymorphisms
    • Montesinos I., Salido E., Delgado T., Cuervo M., and Sierra A. Epidemiologic genotyping of methicillin-resistant Staphylococcus aureus by pulsed-field gel electrophoresis at a university hospital and comparison with antibiotyping and protein A and coagulase gene polymorphisms. J. Clin. Microbiol. 40 6 (2002) 2119-2125
    • (2002) J. Clin. Microbiol. , vol.40 , Issue.6 , pp. 2119-2125
    • Montesinos, I.1    Salido, E.2    Delgado, T.3    Cuervo, M.4    Sierra, A.5
  • 25
    • 9644295892 scopus 로고    scopus 로고
    • National Nosocomial Infections Surveillance (NNIS) System Report, data/par summary from January 1992 through June 2004, issued October 2004
    • NNIS. National Nosocomial Infections Surveillance (NNIS) System Report, data/par summary from January 1992 through June 2004, issued October 2004. Am. J. Infect. Control 32 8 (2004) 470-485
    • (2004) Am. J. Infect. Control , vol.32 , Issue.8 , pp. 470-485
    • NNIS1
  • 27
    • 0031926087 scopus 로고    scopus 로고
    • Staphylococcus epidermidis: emerging resistance and need for alternative agents
    • Raad I., Alrahwan A., and Rolston K. Staphylococcus epidermidis: emerging resistance and need for alternative agents. Clin. Infect. Dis. 26 5 (1998) 1182-1187
    • (1998) Clin. Infect. Dis. , vol.26 , Issue.5 , pp. 1182-1187
    • Raad, I.1    Alrahwan, A.2    Rolston, K.3
  • 30
    • 12444304190 scopus 로고    scopus 로고
    • New method for typing Staphylococcus aureus strains: multiple-locus variable-number tandem repeat analysis of polymorphism and genetic relationships of clinical isolates
    • Sabat A., Krzyszton-Russjan J., Strzalka W., Filipek R., Kosowska K., Hryniewicz W., Travis J., and Potempa J. New method for typing Staphylococcus aureus strains: multiple-locus variable-number tandem repeat analysis of polymorphism and genetic relationships of clinical isolates. J. Clin. Microbiol. 41 4 (2003) 1801-1804
    • (2003) J. Clin. Microbiol. , vol.41 , Issue.4 , pp. 1801-1804
    • Sabat, A.1    Krzyszton-Russjan, J.2    Strzalka, W.3    Filipek, R.4    Kosowska, K.5    Hryniewicz, W.6    Travis, J.7    Potempa, J.8
  • 31
    • 0034769224 scopus 로고    scopus 로고
    • Implant infections: a haven for opportunistic bacteria
    • Schierholz J.M., and Beuth J. Implant infections: a haven for opportunistic bacteria. J. Hosp. Infect. 49 2 (2001) 87-93
    • (2001) J. Hosp. Infect. , vol.49 , Issue.2 , pp. 87-93
    • Schierholz, J.M.1    Beuth, J.2
  • 32
    • 0142150296 scopus 로고    scopus 로고
    • Genotypic and phenotypic properties of coagulase-negative staphylococci causing dialysis catheter-related sepsis
    • Spare M.K., Tebbs S.E., Lang S., Lambert P.A., Worthington T., Lipkin G.W., and Elliott T.S. Genotypic and phenotypic properties of coagulase-negative staphylococci causing dialysis catheter-related sepsis. J. Hosp. Infect. 54 4 (2003) 272-278
    • (2003) J. Hosp. Infect. , vol.54 , Issue.4 , pp. 272-278
    • Spare, M.K.1    Tebbs, S.E.2    Lang, S.3    Lambert, P.A.4    Worthington, T.5    Lipkin, G.W.6    Elliott, T.S.7
  • 33
    • 0033996438 scopus 로고    scopus 로고
    • Dispersal of methicillin-resistant Staphylococcus epidermidis by staff in an operating suite for thoracic and cardiovascular surgery: relation to skin carriage and clothing
    • Tammelin A., Domicel P., Hambraeus A., and Stahle E. Dispersal of methicillin-resistant Staphylococcus epidermidis by staff in an operating suite for thoracic and cardiovascular surgery: relation to skin carriage and clothing. J. Hosp. Infect. 44 2 (2000) 119-126
    • (2000) J. Hosp. Infect. , vol.44 , Issue.2 , pp. 119-126
    • Tammelin, A.1    Domicel, P.2    Hambraeus, A.3    Stahle, E.4
  • 34
    • 0034930585 scopus 로고    scopus 로고
    • Source and route of methicillin-resistant Staphylococcus epidermidis transmitted to the surgical wound during cardio-thoracic surgery. Possibility of preventing wound contamination by use of special scrub suits
    • Tammelin A., Hambraeus A., and Stahle E. Source and route of methicillin-resistant Staphylococcus epidermidis transmitted to the surgical wound during cardio-thoracic surgery. Possibility of preventing wound contamination by use of special scrub suits. J. Hosp. Infect. 47 4 (2001) 266-276
    • (2001) J. Hosp. Infect. , vol.47 , Issue.4 , pp. 266-276
    • Tammelin, A.1    Hambraeus, A.2    Stahle, E.3
  • 35
    • 0030710491 scopus 로고    scopus 로고
    • Molecular diagnostics of infectious diseases
    • Tang Y.W., Procop G.W., and Persing D.H. Molecular diagnostics of infectious diseases. Clin. Chem. 43 11 (1997) 2021-2038
    • (1997) Clin. Chem. , vol.43 , Issue.11 , pp. 2021-2038
    • Tang, Y.W.1    Procop, G.W.2    Persing, D.H.3
  • 36
    • 27844555472 scopus 로고    scopus 로고
    • Bridging the gap between molecular epidemiologists and evolutionists
    • Tibayrenc M. Bridging the gap between molecular epidemiologists and evolutionists. Trends Microbiol. 13 12 (2005) 575-580
    • (2005) Trends Microbiol. , vol.13 , Issue.12 , pp. 575-580
    • Tibayrenc, M.1
  • 37
    • 5444233459 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates
    • Top J., Schouls L.M., Bonten M.J., and Willems R.J. Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates. J. Clin. Microbiol. 42 10 (2004) 4503-4511
    • (2004) J. Clin. Microbiol. , vol.42 , Issue.10 , pp. 4503-4511
    • Top, J.1    Schouls, L.M.2    Bonten, M.J.3    Willems, R.J.4
  • 38
    • 0141817852 scopus 로고    scopus 로고
    • Multi-locus sequence typing: a tool for global epidemiology
    • Urwin R., and Maiden M.C. Multi-locus sequence typing: a tool for global epidemiology. Trends Microbiol. 11 10 (2003) 479-487
    • (2003) Trends Microbiol. , vol.11 , Issue.10 , pp. 479-487
    • Urwin, R.1    Maiden, M.C.2
  • 42
  • 43
    • 0034095457 scopus 로고    scopus 로고
    • Molecular epidemiology of Staphylococcus epidermidis in a neonatal intensive care unit over a three-year period
    • Villari P., Sarnataro C., and Iacuzio L. Molecular epidemiology of Staphylococcus epidermidis in a neonatal intensive care unit over a three-year period. J. Clin. Microbiol. 38 5 (2000) 1740-1746
    • (2000) J. Clin. Microbiol. , vol.38 , Issue.5 , pp. 1740-1746
    • Villari, P.1    Sarnataro, C.2    Iacuzio, L.3
  • 44
    • 0036841516 scopus 로고    scopus 로고
    • Pathogenesis of infections due to coagulase-negative staphylococci
    • von Eiff C., Peters G., and Heilmann C. Pathogenesis of infections due to coagulase-negative staphylococci. Lancet, Infect. Dis. 2 11 (2002) 677-685
    • (2002) Lancet, Infect. Dis. , vol.2 , Issue.11 , pp. 677-685
    • von Eiff, C.1    Peters, G.2    Heilmann, C.3
  • 45
    • 33750625359 scopus 로고    scopus 로고
    • Molecular epidemiology of meticillin-resistant coagulase-negative staphylococci in a Swedish county hospital: evidence of intra- and interhospital clonal spread
    • Widerstrom M., Monsen T., Karlsson C., and Wistrom J. Molecular epidemiology of meticillin-resistant coagulase-negative staphylococci in a Swedish county hospital: evidence of intra- and interhospital clonal spread. J. Hosp. Infect. 64 2 (2006) 177-183
    • (2006) J. Hosp. Infect. , vol.64 , Issue.2 , pp. 177-183
    • Widerstrom, M.1    Monsen, T.2    Karlsson, C.3    Wistrom, J.4
  • 46
    • 0041834448 scopus 로고    scopus 로고
    • The role of molecular biology and nucleic acid technology in the study of human infection and epidemiology
    • Zaidi N., Konstantinou K., and Zervos M. The role of molecular biology and nucleic acid technology in the study of human infection and epidemiology. Arch. Pathol. Lab. Med. 127 9 (2003) 1098-1105
    • (2003) Arch. Pathol. Lab. Med. , vol.127 , Issue.9 , pp. 1098-1105
    • Zaidi, N.1    Konstantinou, K.2    Zervos, M.3


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