메뉴 건너뛰기




Volumn 28, Issue 4, 2006, Pages 533-548

Molecular epigenesis: Distributed specificity as a break in the central dogma

Author keywords

Causal specificity; Combinatorial control; Distributed specificity; Regulated recruitment; Regulation of gene expression; Rosenberg; Waters

Indexed keywords

CONFERENCE PAPER; CONFLICT; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETIC EPIGENESIS; GENETIC TRANSCRIPTION; HUMAN; NUCLEOTIDE SEQUENCE; REGULATORY SEQUENCE;

EID: 39549109779     PISSN: 03919714     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Conference Paper
Times cited : (43)

References (45)
  • 1
    • 12344300804 scopus 로고    scopus 로고
    • Widespread A-to-I RNA Editing of Alu-Containing mRNAs in the Human Transcriptome
    • Athanasiadis A., Rich A., Maas S., 2004, 'Widespread A-to-I RNA Editing of Alu-Containing mRNAs in the Human Transcriptome', PSoS Biology, 2(12):e391.
    • (2004) PSoS Biology , vol.2 , Issue.12
    • Athanasiadis, A.1    Rich, A.2    Maas, S.3
  • 2
    • 79958364435 scopus 로고    scopus 로고
    • Biological Mechanisms: Organized to Maintain Autonomy
    • in press, Boogerd F, et al, eds, New York: Elsevier
    • Bechtel W., (in press), 'Biological Mechanisms: Organized to Maintain Autonomy'. In: Boogerd F., et al. (eds), Systems Biology: Philosophical Foundations, New York: Elsevier.
    • Systems Biology: Philosophical Foundations
    • Bechtel, W.1
  • 3
    • 0036591882 scopus 로고    scopus 로고
    • The mRNA Assembly Line: Transcription and Processing Machines in the Same Factory
    • Bentley D., 2002, 'The mRNA Assembly Line: Transcription and Processing Machines in the Same Factory', Current Opinion in Cell Biology, 14(3): 336-342.
    • (2002) Current Opinion in Cell Biology , vol.14 , Issue.3 , pp. 336-342
    • Bentley, D.1
  • 4
    • 19344378943 scopus 로고    scopus 로고
    • Rules of Engagement: Co-transcriptional Recruitment of Pre-mRNA Processing Factors
    • Bentley D.L., 2005, 'Rules of Engagement: Co-transcriptional Recruitment of Pre-mRNA Processing Factors', Current Opinion in Cell Biology, 17(3): 251-256.
    • (2005) Current Opinion in Cell Biology , vol.17 , Issue.3 , pp. 251-256
    • Bentley, D.L.1
  • 5
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of Alternative pre-messenger RNA splicing
    • Black D.L., 2003 'Mechanisms of Alternative pre-messenger RNA splicing', Annual Reviews of Biochemistry, 72: 291-336.
    • (2003) Annual Reviews of Biochemistry , vol.72 , pp. 291-336
    • Black, D.L.1
  • 7
    • 0034766398 scopus 로고    scopus 로고
    • Alternative Splicing of the Drosophila Dscam Pre-mRNA Is Both Temporally and Spatially Regulated
    • Celottoa A.M., Graveley B.R., 2001, 'Alternative Splicing of the Drosophila Dscam Pre-mRNA Is Both Temporally and Spatially Regulated', Genetics, 159: 599-608.
    • (2001) Genetics , vol.159 , pp. 599-608
    • Celottoa, A.M.1    Graveley, B.R.2
  • 8
    • 21044431735 scopus 로고    scopus 로고
    • Transciptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution
    • Cheng J. et al., 2005, 'Transciptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution', Science, 308: 1149-1154.
    • (2005) Science , vol.308 , pp. 1149-1154
    • Cheng, J.1
  • 9
    • 0035895513 scopus 로고    scopus 로고
    • Gene Number: What if There are Only 30,000 Human Genes?
    • Claverie J. M., 2001, 'Gene Number: What if There are Only 30,000 Human Genes?', Science, 291: 1255-1257.
    • (2001) Science , vol.291 , pp. 1255-1257
    • Claverie, J.M.1
  • 11
    • 0014937223 scopus 로고
    • Central Dogma of Molecular Biology
    • Crick F.H.C., 1970, 'Central Dogma of Molecular Biology', Nature, 227: 561-563.
    • (1970) Nature , vol.227 , pp. 561-563
    • Crick, F.H.C.1
  • 12
    • 0036170283 scopus 로고    scopus 로고
    • The Challenge of Target Sequence Specificity in C→U RNA Editing
    • Davidson N.O., 2002, 'The Challenge of Target Sequence Specificity in C→U RNA Editing', The Journal of Clinical Investigation, 109 (3): 291-294.
    • (2002) The Journal of Clinical Investigation , vol.109 , Issue.3 , pp. 291-294
    • Davidson, N.O.1
  • 13
    • 17744395507 scopus 로고    scopus 로고
    • Epigenetic Programming of Stress Responses through Variations in Maternal Care
    • Fish E.W. et al., 2004, 'Epigenetic Programming of Stress Responses through Variations in Maternal Care', Annals of the New York Academy of Sciences, 1036: 167-180.
    • (2004) Annals of the New York Academy of Sciences , vol.1036 , pp. 167-180
    • Fish, E.W.1
  • 14
    • 34250330777 scopus 로고    scopus 로고
    • What is a Gene, post-ENCODE? History and Updated Definition
    • Gerstein M.B. et al., 2007, 'What is a Gene, post-ENCODE? History and Updated Definition', Genome Research, 17: 669-681.
    • (2007) Genome Research , vol.17 , pp. 669-681
    • Gerstein, M.B.1
  • 16
    • 17644388085 scopus 로고    scopus 로고
    • Mechanisms for the Environmental Regulation of Gene Expression: Ecological Aspects of Animal Development
    • Gilbert S.F., 2005, 'Mechanisms for the Environmental Regulation of Gene Expression: Ecological Aspects of Animal Development', Journal of Biosciences, 30(1): 65-74.
    • (2005) Journal of Biosciences , vol.30 , Issue.1 , pp. 65-74
    • Gilbert, S.F.1
  • 17
    • 0034507456 scopus 로고    scopus 로고
    • Functions and Mechanisms of RNA Editing
    • Gott J.M., Emeson R.B., 2000, 'Functions and Mechanisms of RNA Editing', Annual Review of Genetics, 34: 499-531.
    • (2000) Annual Review of Genetics , vol.34 , pp. 499-531
    • Gott, J.M.1    Emeson, R.B.2
  • 19
    • 0010726339 scopus 로고    scopus 로고
    • Genetic Information: A Metaphor in Search of a Theory
    • Griffiths P.E., 2001, 'Genetic Information: A Metaphor in Search of a Theory', Philosophy of Science, 68(3): 394-412.
    • (2001) Philosophy of Science , vol.68 , Issue.3 , pp. 394-412
    • Griffiths, P.E.1
  • 20
    • 33749447556 scopus 로고    scopus 로고
    • The Developmental Systems Perspective: Organism-Environment Systems as Units of Evolution
    • Preston K, Pigliucci M, eds, Oxford, New York: Oxford University Press
    • Griffiths P.E., Gray R.D., 2003, 'The Developmental Systems Perspective: Organism-Environment Systems as Units of Evolution'. In: Preston K., Pigliucci M. (eds), Phenotypic Integration: Studying the Ecology and Evolution of Complex Phenotypes, Oxford / New York: Oxford University Press, 409-431.
    • (2003) Phenotypic Integration: Studying the Ecology and Evolution of Complex Phenotypes , pp. 409-431
    • Griffiths, P.E.1    Gray, R.D.2
  • 21
    • 0036493224 scopus 로고    scopus 로고
    • A Question of Size: The Eukaryotic Proteome and the Problems in Defining it
    • Harrison P.M. et al., 2002, 'A Question of Size: the Eukaryotic Proteome and the Problems in Defining it', Nucleic Acids Research, 30(5): 1083-1090.
    • (2002) Nucleic Acids Research , vol.30 , Issue.5 , pp. 1083-1090
    • Harrison, P.M.1
  • 23
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic Regulation of Gene Expression: How the Genome Integrates Intrinsic and Environmental Signals
    • Jaenisch R., Bird A., 2003, 'Epigenetic Regulation of Gene Expression: How the Genome Integrates Intrinsic and Environmental Signals', Nature Genetics, 33 (Suppl): 245-254.
    • (2003) Nature Genetics , vol.33 , Issue.SUPPL. , pp. 245-254
    • Jaenisch, R.1    Bird, A.2
  • 24
    • 12144287461 scopus 로고    scopus 로고
    • Novel RNAs Identified from an in-Depth Analysis of the Transcriptome of Human Chromosomes 21 and 22
    • Kampa D. et al., 2004, 'Novel RNAs Identified from an in-Depth Analysis of the Transcriptome of Human Chromosomes 21 and 22', Genome Research, 14: 331-342.
    • (2004) Genome Research , vol.14 , pp. 331-342
    • Kampa, D.1
  • 25
    • 22244442468 scopus 로고    scopus 로고
    • Examples of the Complex Architecture of the Human Transcriptome Revealed by RACE and High-density Tiling Arrays
    • Kapranov P. et al., 2005, 'Examples of the Complex Architecture of the Human Transcriptome Revealed by RACE and High-density Tiling Arrays', Genome Research, 15: 987-997.
    • (2005) Genome Research , vol.15 , pp. 987-997
    • Kapranov, P.1
  • 26
    • 4544242851 scopus 로고    scopus 로고
    • Induction of DNA Methylation and Gene Silencing by Short Interfering RNAs in Human Cells
    • Kawasaki H., Taira K., 2004, 'Induction of DNA Methylation and Gene Silencing by Short Interfering RNAs in Human Cells', Nature, 431: 211-217.
    • (2004) Nature , vol.431 , pp. 211-217
    • Kawasaki, H.1    Taira, K.2
  • 27
    • 0036429269 scopus 로고    scopus 로고
    • Finding Signals that Regulate Alternative Splicing in the Post-Genomic Era
    • Ladd A.N., Cooper T.A., 2002, 'Finding Signals that Regulate Alternative Splicing in the Post-Genomic Era', Genome Biology, 3(11): 1-16.
    • (2002) Genome Biology , vol.3 , Issue.11 , pp. 1-16
    • Ladd, A.N.1    Cooper, T.A.2
  • 29
    • 3843111257 scopus 로고    scopus 로고
    • The Alternative Splicing Gallery (ASG): Bridging the Gap between Genome and Transcriptome
    • Leipzig J., Pevzner P., Heber S., 2004, 'The Alternative Splicing Gallery (ASG): Bridging the Gap between Genome and Transcriptome', Nucleic Acids Research, 32(13): 3977-3983.
    • (2004) Nucleic Acids Research , vol.32 , Issue.13 , pp. 3977-3983
    • Leipzig, J.1    Pevzner, P.2    Heber, S.3
  • 30
    • 0037819447 scopus 로고    scopus 로고
    • Transcription Regulation and Animal Diversity
    • Levine M., Tjian R., 2003, 'Transcription Regulation and Animal Diversity', Nature, 424: 147-151.
    • (2003) Nature , vol.424 , pp. 147-151
    • Levine, M.1    Tjian, R.2
  • 31
    • 0037041395 scopus 로고    scopus 로고
    • An Extensive Network of Coupling among Gene Expression machines
    • Maniatis T., Reed R., 2002, 'An Extensive Network of Coupling among Gene Expression machines', Nature, 416: 499-506.
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 32
    • 1842584883 scopus 로고    scopus 로고
    • RNA Regulation: A New Genetics?
    • Mattick J.S., 2004, ' RNA Regulation: a New Genetics?', Nature Reviews Genetics, 5(4): 316-323.
    • (2004) Nature Reviews Genetics , vol.5 , Issue.4 , pp. 316-323
    • Mattick, J.S.1
  • 33
    • 0000995843 scopus 로고    scopus 로고
    • The Concept of Information in Biology
    • Maynard Smith J., 2000, 'The Concept of Information in Biology', Philosophy of Science, 67(2): 177-194.
    • (2000) Philosophy of Science , vol.67 , Issue.2 , pp. 177-194
    • Maynard Smith, J.1
  • 34
    • 33947666319 scopus 로고    scopus 로고
    • The Nature of Nurture: Maternal Effect and Chromatin Modelling
    • Cacioppo J.T, Berntson G.G, eds, Cambridge, MA: The MIT Press
    • Meaney M.J., 2004, 'The Nature of Nurture: Maternal Effect and Chromatin Modelling'. In: Cacioppo J.T., Berntson G.G. (eds), Essays in Social Neuroscience, Cambridge, MA: The MIT Press, 1-14.
    • (2004) Essays in Social Neuroscience , pp. 1-14
    • Meaney, M.J.1
  • 35
    • 33847614418 scopus 로고    scopus 로고
    • Covalent Modification of DNA Regulates Memory Formation
    • Miller C.A., Sweatt J.D., 2007, 'Covalent Modification of DNA Regulates Memory Formation', Neuron, 53: 857-869.
    • (2007) Neuron , vol.53 , pp. 857-869
    • Miller, C.A.1    Sweatt, J.D.2
  • 36
    • 0003536227 scopus 로고    scopus 로고
    • Mousseau T.A, Fox C.W, eds, Oxford: Oxford University Press
    • Mousseau T.A., Fox C.W. (eds), 2003, Maternal Effects as Adaptations, Oxford: Oxford University Press.
    • (2003) Maternal Effects as Adaptations
  • 38
    • 0004211673 scopus 로고    scopus 로고
    • Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
    • Ptashne M., Gann A., 2002, Genes and Signals, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
    • (2002) Genes and Signals
    • Ptashne, M.1    Gann, A.2
  • 41
    • 35348883518 scopus 로고    scopus 로고
    • Stotz K., 2006, 'With Genes Like That, Who Needs an Environment? Postgenomics' Argument for the Ontogeny of Information', Philosophy of Science, 73(5), proceedings PSA 04, December 2006. Preprint: http//:philsci-archive.pitt.edu/archive/00002456/.
    • Stotz K., 2006, 'With Genes Like That, Who Needs an Environment? Postgenomics' Argument for the Ontogeny of Information', Philosophy of Science, 73(5), proceedings PSA 04, December 2006. Preprint: http//:philsci-archive.pitt.edu/archive/00002456/.
  • 42
    • 39549102990 scopus 로고    scopus 로고
    • Stotz K., (submitted), '2001 and All That: a Tale of a Third Science', Biology & Philosophy.
    • Stotz K., (submitted), '2001 and All That: a Tale of a Third Science', Biology & Philosophy.
  • 43
    • 39549113400 scopus 로고    scopus 로고
    • Waters C.K. (forthcoming a), 'A Pluralist Interpretation of Gene-centered Biology'. In: Kellert S., Longino H.E., Waters C.K. (eds), Scientific Pluralism, Minneapolis: University of Minnesota Press.
    • Waters C.K. (forthcoming a), 'A Pluralist Interpretation of Gene-centered Biology'. In: Kellert S., Longino H.E., Waters C.K. (eds), Scientific Pluralism, Minneapolis: University of Minnesota Press.
  • 44
    • 39549105550 scopus 로고    scopus 로고
    • That Make a Difference
    • forthcoming b, Causes
    • Waters C.K., (forthcoming b), 'Causes That Make a Difference', Journal of Philosophy.
    • Journal of Philosophy
    • Waters, C.K.1
  • 45
    • 14844294780 scopus 로고    scopus 로고
    • Genome Semantics, in Silico Multicellular Systems and the Central Dogma
    • Werner E., 2005, 'Genome Semantics, in Silico Multicellular Systems and the Central Dogma', FEBS Letters, 579(8): 1779-1782.
    • (2005) FEBS Letters , vol.579 , Issue.8 , pp. 1779-1782
    • Werner, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.