Identification of quantitative trait loci for wood quality and growth across eight full-sib coastal Douglas-fir families

Tree Genetics and Genomes

Volumn 4, Issue 2, 2008, Pages 159-170

  Ukrainetz, Nicholas K ^a   Ritland, Kermit ^a   Mansfield, Shawn D ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Douglas fir; QTL mapping; Wood quality traits

Indexed keywords

PSEUDOTSUGA; PSEUDOTSUGA MENZIESII;

EID: 38949156541     PISSN: 16142942     EISSN: 16142950     Source Type: Journal    
DOI: 10.1007/s11295-007-0097-x     Document Type: Article

References (49)

1. Arcade A, Faivre-Rampant P, Paques LE, Prat D (2002) Localisation of genomic regions controlling microdensitometric parameters of wood characteristics in hybrid larches. Ann For Sci 59(5-6):607-615
2. Aubry CA, Adams WT, Fahey TD (1998) Determination of relative economic weights for multitrait selection in coastal Douglas-fir. Can J For Res 28(8):1164-1170
3. Beavis WD (1998) QTL analyses: power, precision and accuracy. In: Molecular dissection of complex traits. CRC, Raleigh, North Carolina, pp 145-162
4. Bradshaw HD, Stettler RF (1995) Molecular genetics of growth and development in Populus. IV. Mapping QTLs with large effects on growth, form, and phenology traits in a forest tree. Genetics 139:963-973
5. Brown GR, Bassoni DL, Gill GP, Fontana JR, Wheeler NC, Megraw RA, Davis MF, Sewell MM, Tuskan GA, Neale DB (2003) Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL verification and candidate gene mapping. Genetics 164(4):1537-1546
6. Byrne M, Murrell JC, Owen JV, Williams ER, Moran GF (1997) Mapping of quantitative trait loci influencing frost tolerance in Eucalyptus nitens. Theor Appl Genet 95(5-6):975-979
7. Chagne D, Lalanne C, Madur D, Kumar S, Frigerio JM, Krier C, Decroocq S, Savoure A, Bou-Dagher-Kharrat M, Bertocchi E, Brach J, Plomion C (2002) A high density genetic map of maritime pine based on AFLPs. Ann For Sci 59(5-6):627-636
8. Cramer S, Kretschmann D, Lakes R, Schmidt T (2005) Earlywood and latewood elastic properties in loblolly pine. Holzforschung 59:531-538
9. Chantre G, Rozenberg P, Baonza V, Macchioni N, Le Turcq A, Rueff M, Petit-Conil M, Heois B (2002) Genetic selection within Douglas-fir (Pseudotsuga menziesii) in Europe for papermaking uses. Ann For Sci 59(5-6):583-593
10. Evans R, Ilic J (2001) Rapid prediction of wood stiffness from microfibril angle and density. For Prod J 51(3):53-57
11. Grattapaglia D, Bertolucci FLG, Penchel R, Sederoff RR (1996) Genetic mapping of quantitative trait loci controlling growth and wood quality traits in Eucalyptus grandis using a maternal half-sib family and RAPD markers. Genetics 144:1205-1214
12. Haseman JK, Elston RC (1972) Investigation of linkage between a quantitative trait and a marker locus. Behav Genet 2(1):3-9
13. Hu X-S, Goodwillie C, Ritland KM (2004) Joining genetic linkage maps using a joint likelihood function. Theor Appl Genet 109:996-1004
14. Huntley SK, Ellis D, Gilbert M, Chapple CS, Mansfield SD (2003) Significant increases in pulping efficiency in C4H-F5H-transformed poplars: improved chemical savings and reduced environmental toxins. J Agric Food Chem 51:6178-6183
15. Jermstad KD, Bassoni DL, Wheeler NC, Neale DB (1998) A sex-averaged genetic linkage map in coastal Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco var 'menziesii') based on RFLP and RAPD markers. Theor Appl Genet 97:762-770
16. Jermstad KD, Bassoni DL, Jech KS, Wheeler NC, Neale DB (2001a) Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. I. Timing of vegetative bud flush. Theor Appl Genet 102(8):1142-1151
17. Jermstad KD, Bassoni DL, Wheeler NC, Anekonda TS, Aitken SN, Adams WT, Neale DB (2001b) Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. II. Spring and fall cold-hardiness. Theor Appl Genet 102:1152-1158
18. Jermstad KD, Bassoni DL, Jech KS, Ritchie GA, Wheeler NC, Neale DB (2003) Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. III. Quantitative trait loci-by-environment interactions. Genetics 165(3):1489-1506
19. Johnson GR, Gartner BL (2006) Genetic variation in basic density and modulus of elasticity of coastal Douglas-fir. Tree Genet Genomes 3:25-33
20. Johnson GR, Wheeler NC, Strauss SS (2000) Financial feasibility of marker-aided selection in Douglas-fir. Can J For Res 30(12):1942-1952
21. Markussen T, Fladung M, Achere V, Favre JM, Faivre-Rampant P, Aragones A, Perez DD, Harvengt L, Espinel S, Ritter E (2003) Identification of QTLs controlling growth, chemical and physical wood property traits in Pinus pinaster (Ait.). Silvae Genet 52(1):8-15
22. Megraw RA, Leaf G, Bremer D (1998) Longitudinal shrinkage and microfibril angle in loblolly pine. In: Microfibril angle in wood. University of Canterbury Press, Christchurch, New Zealand, pp 27-61
23. Neale DB, Sewell MM, Brown GR (2002) Molecular dissection of the quantitative inheritance of wood property traits in loblolly pine. Ann For Sci 59(5-6):595-605
24. Otto SP, Jones CD (2000) Detecting the undetected: estimating the total number of loci underlying a quantitative trait. Genetics 156:2093-2197
25. Remington DL, Whetten RW, Liu B-H, O'Malley DM (1999) Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda. Theor Appl Genet 98:1279-1292
26. SAS (2003) SAS System for Windows version 9.1. SAS and all other SAS Institute Inc. product or service names are registered trademarks or trademarks of SAS Institute. SAS Institute, Cary, NC, USA
27. Seaton G, Haley CS, Knott SA, Kearsey M, Visscher PM (2002) QTL express: mapping quantitative trait loci in simple and complex pedigrees. Bioinformatics 18(2):339-340
28. Seth RS, Kingsland MA (1990) The reinforcing properties of softwood kraft pulps. Pulp Pap Can 91(7):68-72, 74-75
29. Sewell MM, Sherman BK, Neale DB (1999) A consensus map for loblolly pine (Pinus taeda L.). I. Construction and integration of individual linkage maps from two outbred three-generation pedigrees. Genetics 151(1):321-330
30. Sewell MM, Bassoni DL, Megraw RA, Wheeler NC, Neale DB (2000) Identification of QTLs influencing wood property traits in loblolly pine (Pinus taeda L.). I. Physical wood properties. Theor Appl Genet 101(8):1273-1281
31. Sewell MM, Davis MF, Tuskan GA, Wheeler NC, Elam CC, Bassoni DL, Neale DB (2002) Identification of QTLs influencing wood property traits in loblolly pine (Pinus taeda L.). II. Chemical wood properties. Theor Appl Genet 104(2-3):214-222
32. St. Clair JB (1994) Genetic variation in tree structure and its relation to size in Douglas-fir. I. Biomass partitioning, foliage efficiency, stem form, and wood density. Can J For Res 24(6):1226-1235
33. Strauss SH, Lande R, Namkoong G (1992) Limitations of molecular-marker-aided selection in forest tree breeding. Can J For Res 22(7):1050-1061
34. Tappi Useful Method (1991) UM-250: acid-soluble lignin in wood and pulp. TAPPI Press, Atlanta
35. Thamarus K, Groom K, Bradley A, Raymond CA, Schimleck LR, Williams ER, Moran GF (2004) Identification of quantitative trait loci for wood and fibre properties in two full-sib pedigrees of Eucalyptus globulus. Theor Appl Genet 109(4):856-864
36. Travis SE, Ritland K, Whitham TG, Keim P (1998) A genetic linkage map of Pinyon pine (Pinus edulis) based on amplified fragment length polymorphisms. Theor App Genet 97(5-6):871-880
37. Ukrainetz NK, Ritland K, Mansfield SD (2007) An AFLP linkage map for Douglas-fir based upon multiple full-sib families. Tree Genet Genomes DOI 10.1007/s11295-007-0099-8
38. USDA (2000) Wood handbook: wood as an engineering material. University Press of the Pacific, Madison, Wisconsin, p 463
39. Van Ooijen JW, Voorrips RE (2001) JoinMap 3.0, software for the calculation of genetic linkage maps. Plant Research International, Wageningen, The Netherlands
40. Vargas-Hernandez J, Adams WT (1991) Genetic variation of wood density components in young coastal Douglas-fir-implications for tree breeding. Can J For Res 21(12):1801-1807
41. Vargas-Hernandez J, Adams WT (1992) Age-age correlations and early selection for wood density in young coastal Douglas-fir. For Sci 38(2):467-478
42. Vargas-Hernandez J, Adams WT, Krahmer RL (1994) Family variation in age trends of wood density traits in young coastal Douglas-fir. Wood Fiber Sci 26(2):229-236
43. Visscher PM, Hopper JL (2001) Power of regression and maximum likelihood methods to map QTL from sib-pair and DZ twin data. Ann Hum Genet 65:583-601
44. Wang HH, Drummond JG, Reath SM, Hunt K, Watson PA (2001) An improved fibril angle measurement method for wood fibres. Wood Sci Technol 34:493-503
45. Wheeler NC, Jermstad KD, Krutovsky K, Aitken SN, Howe GT, Krakowski J, Neale DB (2005) Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. IV. Cold-hardiness QTL verification and candidate gene mapping. Mol Breed 15(2):145-156
46. Wu RL (1998) Genetic mapping of QTLs affecting tree growth and architecture in Populus: implications for ideotype breeding. Theor Appl Genet 96:447-457
47. Wu HX (2002) Study of early selection in tree breeding. 4. Efficiency of marker-aided early selection (MAES). Silvae Genet 51(5-6):261-269
48. Wu RL, Han YF, Hu JJ, Fang JJ, Li L, Li ML, Zeng ZB (2000) An integrated genetic map of Populus deltoides based on amplified fragment length polymorphisms. Theor Appl Genet 100(8):1249-1256
49. Yoshimaru H, Ohba K, Tsurumi K, Tomaru N, Murai M, Mukai Y, Suyama Y Tsumura Y, Kawahara T, Sakamaki Y (1998) Detection of quantitative trait loci for juvenile growth, flower bearing and rooting ability based on a linkage map of sugi (Cryptomeria japonica D. Don). Theor Appl Genet 97:45-50