An integrated genetic map of Populus deltoides based on amplified fragment length polymorphisms

Theoretical and Applied Genetics

Volumn 100, Issue 8, 2000, Pages 1249-1256

  Wu, R L ^a,b   Han, Y F ^b   Hu, J J ^b   Fang, J J ^b   Li, L ^b   Li, M L ^b   Zeng, Z B ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b RESEARCH INSTITUTE OF FORESTRY   (China)

Author keywords

AFLP; Heteroduplex; Intercross marker; Linkage map; Populus deltoides; Testcross marker

Indexed keywords

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; BACKCROSSING; HAPLOIDY; HETERODUPLEX; HETEROZYGOSITY; LINKAGE GROUP; PLANT GENOME; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY;

POPULUS DELTOIDES;

EID: 0033947565     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220051431     Document Type: Article

References (32)

1. Antolin MF, Bosio CF, Cotton J, Sweeney W, Strand MR, Black WC IV (1996) Intensive linkage mapping in a wasp (Bracon hebetor) and a mosquito (Aedes aegypti) with single-strand conformation polymporphism analysis of random amplified polymorphic DNA markers. Genetics 143: 1727-1738
2. Ayliffe MA, Lawrence GJ, Ellis JG, Pryor AJ (1994) Heteroduplex molecules formed between allelic sequences cause non-parental RAPD bands. Nucleic Acids Res 22: 1632-1636
3. Barreneche T, Bodenes C, Lexer C, Trontin JF, Fluch S, Streiff R, Plomion C, Roussel G, Steinkellner H, Burg K, Favre JM, Glossl J, Kremer A (1998) A genetic linkage map of Quercus robus L. (pedunculate oak) based on RAPD, SCAR, microsatellite, ministatellite, isozyme and 5S rDNA markers. Theor Appl Genet 97: 1090-1103
4. Bradshaw HD, Stettler RF (1994) Molecular genetics of growth and development in Populus. II. Segregation distortion due to genetic load. Theor Appl Genet 89: 551-558
5. Bradshaw HD, Stettler RF (1995) Molecular genetics of growth and development in Populus. IV. Mapping QTLs with large effects on growth, form, and phenology traits in a forest tree. Genetics 139:963-973
6. Bradshaw HD, Villar M, Watson BD, Otto KG, Stewart S, Stettler RF (1994) Molecular genetics of growth and development in Populus. III. A genetic linkage map of a hybrid poplar composed of RFLP, STS, and RAPD markers. Theor Appl Genet 89: 167-178
7. Burr B, Burr FA (1991) Recombinant inbreds for molecular mapping in maize: theoretical and practical considerations. Trends Genet 7: 55-60
8. Cervera MT, Gusmao J, Steenackers M, Peleman J, Storme V, Van den Broeck A, Van Montagu M, Boerjan W (1996) Identification of AFLP molecular markers for resistance against Melampsora larici-populina in Populus. Theor Appl Genet 93: 733-737
9. Clark PJ, Evans FC (1954) Distance to nearest neighbor as a measure of spatial relationships in populations. Ecology 35: 445-453
10. Darvasi A, Weinreb A, Minke V, Weller JI, Soller M (1993) Detecting marker-QTL linkage and estimating QTL gene effect and map location using a saturated gene map. Genetics 134: 943-951
11. Davis TM, Hu H, Haigis KM, McGowan PJ (1995) Template mixing: a method of enhancing detection and interpretation of co-dominant RAPD markers. Theor Appl Genet 91: 582-588
12. Devey ME, Sewell MM, Uren TL, Neale DB (1999) Comparative mapping in loblolly and radiata pine using RFLP and microsatellite markers. Theor Appl Genet 99: 656-662
13. Grattapaglia D, Sederoff R (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers. Genetics 137: 1121-1137
14. Grattapaglia D, Bertolucci FLG, Sederoff RR (1995) Genetic mapping of QTL controlling vegetative propagation in Eucalyptus grandis and E. urophylla using a pseudo-testcross mapping strategy and RAPD markers. Theor Appl Genet 144: 1205-1214
15. Kesseli RV, Paran I, Michelmore RW (1994) Analysis of a detailed genetic linkage map of Lactuca sativa (Lettuce) constructed from RFLP and RAPD markers. Genetics 136: 1435-1446
16. 1 family. Theor Appl Genet 90: 1119-1127
17. Lincoln S, Daly M, Lander E (1992) Constructing genetic maps with MAPMAKER/EXP 3.0. Whitehead Institute Technical Report, 3rd edn. Whitehead Institute, Cambridge, Mass.
18. Liu Z, Furnier GR (1993) Inheritance and linkage of allozymes and restriction fragment length polymorphisms in trembling aspen. J Hered 84: 419-424
19. Maliepaard C, Jansen J, Van Ooijen JW (1997) Linkage analysis in a full-sib family of an outbreeding plant species: overview and consequences for applications. Genet Res 70: 237-250
20. Maliepaard C, Alston FH, van Arkel G, Brown LM, Chevreau E, Dunemann F, Evans KM, Gardiner S, Guilford P, van Heusden AW, Janse J, Laurens F, Lynn JR, Manganaris AG, den Nijs APM, Periam N, Rikkerink E, Roche P, Ryder C, Sansavini S, Schmidt H, Tartarini S, Verhaegh JJ, Vrielink-van Ginkel M, King GJ (1998) Aligning male and female linkage maps of apple (Malus pumila Mill.) using multi-allelic markers. Theor Appl Genet 97: 60-73
21. Marques CM, Araujo JA, Ferreira, Whetten R, O'Malley DM, Liu BH, Sederoff R (1998) AFLP genetic maps of Eucalyptus globulus and E. tereticornis. Theor Appl Genet 96: 727-737
22. Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88: 9828-9832
23. Namkoong G, Kang H (1990) Quantitative genetics of forest trees. Plant Breed Rev 8: 139-188
24. Novy RG, Vorsa N (1996) Evidence for RAPD heteroduplex formation in cranberry: implications for pedigree and genetic-relatedness studies and a source of co-dominant RAPD markers. Theor Appl Genet 92: 840-849
25. Paglia GP, Olivieri AM, Morgante M (1998) Towards second-generation STS (sequence-tagged sites) linkage maps in conifers: a genetic map of Norway spruce (Picea abies K). Mol Gen Genet 258: 466-478
26. Remington DL, Whetten RW, Liu BH, O'Malley DM (1999) Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda. Theor Appl Genet 98: 1279-1292
27. Stettler RF, Bradshaw HD, Heilman PE, Hinckley TM (1996) Biology of Populus and its implications for management and conservation. NRC Research Press, National Research Council of Canada, Ottawa, Ont.
28. van Eck HJ, van der Voort JP, Draaistra J, Vanzandvoort P, Vanenckevort E, Segers B, Peleman J, Jacobsen E, Helder J, Bakker J (1995) The inheritance and chromosomal localization of AFLP markers in a non-inbred potato offspring. Mol Breed 1: 397-410
29. Verhaegen D, Plomion C (1996) Genetic mapping of Eucalyptus urophylla and Eucalyptus grandis using RAPD markers. Genome 39: 1051-1061
30. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Homes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23: 4407-4414
31. Williams JGK, Kubelik AR, Livek KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful genetic markers. Nucleic Acids Res 18: 6531-6535
32. Young WP, Wheeler PA, Coryell VH, Keim P, Thorgaard GH (1998) A detailed linkage map of rainbow trout produced using doubled haploids. Genetics 148: 839-850